KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:00:42 2014 Check: 00 .. Name: ENSBTAP00000017174/1-724 Len: 784 Check: 2282 Weight: 1.00 Name: ENSP00000240423/1-741 Len: 784 Check: 9703 Weight: 1.00 Name: ENSTTRP00000007367/1-733 Len: 784 Check: 3377 Weight: 1.00 Name: bmy_06896T0/1-768 Len: 784 Check: 9950 Weight: 1.00 Name: BACU017719/1-736 Len: 784 Check: 3664 Weight: 1.00 // 1 50 ENSBTAP00000017174/1-724 ---MRPPC-- ---------- ---------- ---------- --SGPRGRHH ENSP00000240423/1-741 ---MGPPG-- ---------- ---------- -PALPATMNN SSSETRGHPH ENSTTRP00000007367/1-733 ---MGPPW-- ---------- ---------- -PVLSATMKN SPSGTRECHH bmy_06896T0/1-768 MCCELPPWDR SQPLFRRRKC PAEGFLSKCF VPLLSATMKN SPSGTRGCHH BACU017719/1-736 ------MWDT ---------- ---------- LPPGSYTLR- ---GVSSFKR 51 100 ENSBTAP00000017174/1-724 STASPAEWAF PTALPRKAPL NTPGTPVLED FPQNDDEKEK LQRRRSRVFD ENSP00000240423/1-741 SASSPSERVF PMPLPRKAPL NIPGTPVLED FPQNDDEKER LQRRRSRVFD ENSTTRP00000007367/1-733 STSSPSE-VF SMALPRKAPL NTPGTPVLED FPQNDDEKER LQRRRSR-FD bmy_06896T0/1-768 STSSPSEQVF SMALPRKAPL STPGTPVLED FPQNDDEKER LQRRRSRVFD BACU017719/1-736 RFSWNAQQVF SMALPRKAPL STPGTPVLED FPQNDDEKER LQRRRSRVFD 101 150 ENSBTAP00000017174/1-724 LQFSTDSPRL LASPSGRNVE ISATMPKFTN TQITEHYSTC IKLSTENKIT ENSP00000240423/1-741 LQFSTDSPRL LASPSSRSID ISATIPKFTN TQITEHYSTC IKLSTENKIT ENSTTRP00000007367/1-733 LQFSTDSPHL LASPSSRNVD VSATIPKFTN TQITEHYSTC IKLSAENKIT bmy_06896T0/1-768 LQFSTDSPHL LASPSSRNVD VSATIPKFTN TQITEHYSTC IKLSAENKIT BACU017719/1-736 LQFSTDSPHL LASPSSRNVD VSATIPKFTN TQITEHYSTC IKLSAENKIT 151 200 ENSBTAP00000017174/1-724 TKNAFGLHLI DFMSEILKQK DAEPTNFKVA AGTLDASTKI YAVRVDAVHA ENSP00000240423/1-741 TKNAFGLHLI DFMSEILKQK DTEPTNFKVA AGTLDASTKI YAVRVDAVHA ENSTTRP00000007367/1-733 TKNAFGLHLI DFMSEILKQK DAEPTNFKVA AGTLDASTKI YAVRVDAVHA bmy_06896T0/1-768 TKNAFGLHLI DFMSEILKQK DAEPTNFKVA AGTLDASTKI YAVRVDAVHA BACU017719/1-736 TKNAFGLHLI DFMSEILKQK DAEPTNFKVA AGTLDASTKI YAVRVDAVHA 201 250 ENSBTAP00000017174/1-724 DVYKVLGGLG KDAPPPEEAE DHGADGSATE TGTAKKAPKP RKKHSCKTIE ENSP00000240423/1-741 DVYRVLGGLG KDAPSLEEVE GHVADGSATE MGTTKKAVKP KKKHLHRTIE ENSTTRP00000007367/1-733 DVYRVLGGLG KDAPSPEEEE GHGADGSATE TGTTKKAPKP RKKHLYKTIE bmy_06896T0/1-768 DVYKVLGGLG KDAPSPEEEE GHGADGSATE TGTTKKAPKP RKKHLYKTIE BACU017719/1-736 DVYKVLGGLG KDAPSPEEEE GHGADGSATE TGTTKKAPKP RKKHLYKTIE 251 300 ENSBTAP00000017174/1-724 QNVNNLNVSS ADRKCEVDPM FQKTAASFDE CSTAGVFLST LHCPDYRSEL ENSP00000240423/1-741 QNINNLNVSE ADRKCEIDPM FQKTAASFDE CSTAGVFLST LHCQDYRSEL ENSTTRP00000007367/1-733 PNINNLNVSE ADRKCEIDPM FQKTAASFDE CSTAGVFLST LHCHDYRSEL bmy_06896T0/1-768 QNINNLNVSE ADRKCEIDPM FQKTAASFDE CSTAGVFLST LHCHDYRSEL BACU017719/1-736 QNINNLNVSE ADRKCEIDPM FQKTAASFDE CSTAGVFLST LHCHDYRSEL 301 350 ENSBTAP00000017174/1-724 LFPADIQTLS SGEPPELPDL GWVEMTDLKA ALQQCAEDRQ ICPSLAGFQF ENSP00000240423/1-741 LFPSDVQTLS TGEPLELPEL GCVEMTDLKA PLQQCAEDRQ ICPSLAGFQF ENSTTRP00000007367/1-733 LFPSDVQTLS TGEPLDLPDL GWVEMTDLKA PLQQCVEDRQ ICPSLAGFQF bmy_06896T0/1-768 LFPSDVQTLS TGEPLDLPDL GWVEMTDLKA PLQQCVEDRQ ICPSLAGFQF BACU017719/1-736 -------TLS TGEPLDLPDL GWVEMTDLKA PLQQCVEDRQ ICPSLAGFQF 351 400 ENSBTAP00000017174/1-724 TKWDSEAHNE SVSALVDKFK KKDQVFDLDA EVEDSDCEDF PNGPLEDDFD ENSP00000240423/1-741 TQWDSETHNE SVSALVDKFK KNDQVFDINA EVDESDCGDF PDGSLGDDFD ENSTTRP00000007367/1-733 TKWDSETHNE SVSALVDKFK KNDQVFDINA EVEESDCGDF RIGALEDDFD bmy_06896T0/1-768 TKWDSETHNE SVSALMDKFK KNDQVFDINA EVEESDCGDF PVGALEDDFD BACU017719/1-736 TEWDSETHNE SVSALMDKFK KNDQVFDINA EVEESDCGDF PVGALEDDFD 401 450 ENSBTAP00000017174/1-724 ANDEADQTEA ------GDRT ELRSWKEPCQ VQSCQDEVIP LGDGDIWTLC ENSP00000240423/1-741 ANDEPDHTAV ------GDHE EFRSWKEPCQ VQSCQEEMIS LGDGDIRTMC ENSTTRP00000007367/1-733 ANDEPDYTAV ------GDHT EFGSWKEPCH VQSCQEEMTP LGDGDVWSLC bmy_06896T0/1-768 ASDDPDHTAV GDHTAAGDHT KFGSWKEPCH VQSCQEEMTP LGDGDIWSLC BACU017719/1-736 ANDDPDHTAV GDHTAAGDHT KFGSWKEP-- ---CQEEMTP LGDGDIWSLC 451 500 ENSBTAP00000017174/1-724 PLLSMKPGEY SYFSPRTMSM WAGPDHWRFR PRLKRDTASQ SEHRKKSS-K ENSP00000240423/1-741 PLLSMKPGEY SYFSPRTMSM WAGPDHWRFR PRRKQDAPSQ SENKKKSTKK ENSTTRP00000007367/1-733 PLLSMKPGEY SYFSPRTMSM WAGPEHWRFR LRHKQDTTSH SENRKKTTKK bmy_06896T0/1-768 PLLSMKPGEY SYFSPRTMSM WAGPDHWRFR LRHKQDTTSQ SENRKKSTKK BACU017719/1-736 PLLSMKPGEY SYFSPRTMSM WAGPDHWRFR LRHKQDTTSQ SENRNKSTKK 501 550 ENSBTAP00000017174/1-724 DFKIDFDDDI DFDVHFRKTK AVTVLTKFTL ENQNWRATTL PTDFQYETEN ENSP00000240423/1-741 DFEIDFEDDI DFDVYFRKTK AATILTKSTL ENQNWRATTL PTDFNYNVDT ENSTTRP00000007367/1-733 DFEIDFDDDI DFDVYFRKTK AATVLTKSTL ENQNWRATTL PTDFHYETEN bmy_06896T0/1-768 DFEIDFDDDI DFNVYFRKTK AATVLTKSTL ENQNWRATTL PTDFHYETEN BACU017719/1-736 DFEIDFDDDI DFDVYFRKTK AASALTKSTL ENQNWRATTL PTDFHYETEN 551 600 ENSBTAP00000017174/1-724 LVQLHLKPGT RLLKVAQGQK AGTEHCEEIG NYDYNNPNDT SNFCPGLQAA ENSP00000240423/1-741 LVQLHLKPGT RLLKMAQGHR VETEHYEEIE DYDYNNPNDT SNFCPGLQAA ENSTTRP00000007367/1-733 LVQLHLKPGT RLLKMAQGQR AGTEHCEEID DYDYNNPNDT SNFCPGSQAA bmy_06896T0/1-768 LVQLHLKPGT RLLKMAQGQR AGTEHCEEIE DYDYNNPNDT SNFCPGLQAA BACU017719/1-736 LVQLHLKPGT RLLKMAQGQR AGTEHCEEIE DYDYNNPNDT SNFCPGLQAA 601 650 ENSBTAP00000017174/1-724 DSDYEESDDL FEGPGGTLG- --HSDHPPAT TQDSNEASEA HGLDITTYRE ENSP00000240423/1-741 DSDDEDLDDL FVGPVGNSDL SPYPCHPPKT AQQNGDTPEA QGLDITTYGE ENSTTRP00000007367/1-733 DSDYEESDDL FVGPVGTFD- --HSGH-PTT TQDNDDAPEV QGLDITTYGE bmy_06896T0/1-768 DSDYEESDDL FVGPAGTFD- --HSGHPPTT TQDNDDAPEV QGLDITTYGE BACU017719/1-736 DSDYEESDDL FVGPAGTFD- --HSGHPPTA TQDNDDAPEV QGLDITTYGE 651 700 ENSBTAP00000017174/1-724 SNLVAEPQKV NKIEIQYAKT AKKMDMKKLK QSMWSLLTET P-KQADAEVN ENSP00000240423/1-741 SNLVAEPQKV NKIEIHYAKT AKKMDMKKLK QSMWSLLTAL SGKEADAEAN ENSTTRP00000007367/1-733 SNLVAEPQKV NKIEIQYAKA AKKMDMKKLK QSMWSLLMEI P-KQADAEAN bmy_06896T0/1-768 SNLVAEPQKV NKIEIQYAKA AKKMDMKKLK QSMWSLLTEI P-KQADAEAN BACU017719/1-736 SNLVAEPQKV NKIEIQYAKA AKKMDMKKLK QSMWSLLTEI P-KQADAEAN 701 750 ENSBTAP00000017174/1-724 HSEDGEAGPL EEGPDKK-LS SLTKDLQKSL PPLMAQNLSI PLAFACLLHL ENSP00000240423/1-741 HREAGKEAAL AEVADEKMLS GLTKDLQRSL PPVMAQNLSI PLAFACLLHL ENSTTRP00000007367/1-733 HRENGEAGDP VQVADKK-LS GLTKDLQKXX XXXXXXXXXX XXXXXXXXXX bmy_06896T0/1-768 HRENGEAGDP VQVADKK-LS GLTKDLQKSL PPLMAQNLSI PLAFACLLHL BACU017719/1-736 HRENGEAGDP VQVADKK-LS GLTKDLQKSL PPLMAQNLSI PLAFACLLHL 751 800 ENSBTAP00000017174/1-724 ANEKNLKLEG TK------DL SDVLVWQED- ---- ENSP00000240423/1-741 ANEKNLKLEG TE------DL SDVLVRQGD- ---- ENSTTRP00000007367/1-733 XXXXNLKLEG TE------DL SDVLVRQGD- ---- bmy_06896T0/1-768 ANEKNLKLEG TE------DL SDVLVRQGD- ---- BACU017719/1-736 ANEK-VGKSG KRGRVLCVNL LELFIIHGRP HRTS