KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:00:45 2014 Check: 00 .. Name: ENSTTRP00000004047/1-364 Len: 455 Check: 7860 Weight: 1.00 Name: bmy_03268T0/1-454 Len: 455 Check: 7135 Weight: 1.00 Name: BACU017321/1-454 Len: 455 Check: 7334 Weight: 1.00 Name: ENSP00000315635/1-366 Len: 455 Check: 2047 Weight: 1.00 Name: ENSBTAP00000017194/1-365 Len: 455 Check: 76 Weight: 1.00 // 1 50 ENSTTRP00000004047/1-364 MALPPGPATL PHTLLLLPAL LSSG------ ---------- ---------- bmy_03268T0/1-454 MALPPGPATL PHTLLLLPAL LSSGTPLFSP WPCICAVKSP SLPSLPASSV BACU017321/1-454 MALPPGPATL PHTLLLLPAL LSSGTPLFSP WPCICVVKSP SLPSLPASSV ENSP00000315635/1-366 MALPPGPAAL RHTLLLLPAL LSSG------ ---------- ---------- ENSBTAP00000017194/1-365 MALPAWPATL PHTLLLLPAL LSSG------ ---------- ---------- 51 100 ENSTTRP00000004047/1-364 ---------- ---------- ---------- ---------- ---------- bmy_03268T0/1-454 WVPTPGTRGG FPSSTSPRSS RPWLENPGAL SLGLLPLCNW TSSQSQNSTK BACU017321/1-454 WVPTPGTRVG FPSSTSPRSS RPWLENPGAL SLGLLPLCNW TSSRSQNSTK ENSP00000315635/1-366 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000017194/1-365 ---------- ---------- ---------- ---------- ---------- 101 150 ENSTTRP00000004047/1-364 ---------- ---WGELAPQ IDGHTWAERA LRENERHAFT CWVAGGPGTP bmy_03268T0/1-454 PPPALPRIPC VPGWGELAPQ IDGHTWAERA LRENERHAFT CWVAGGPGAP BACU017321/1-454 PPPALPRIPC VPGWGELAPQ IDGHTWAERA LRENERHAFT CWVAGGPGTP ENSP00000315635/1-366 ---------- ---WGELEPQ IDGQTWAERA LRENERHAFT CRVAGGPGTP ENSBTAP00000017194/1-365 ---------- ---WGELAPQ IDGQTWAERA LRENERHAFT CRVAGGLGTP 151 200 ENSTTRP00000004047/1-364 RLAWYLDGQL QKTSTSRLLS VGREAFSGGT STFTVTAQRA QHELNCSLQD bmy_03268T0/1-454 RLAWYLDGQL QKASTSRLLS VGGEAFSGGT STFTVTAQRA QHELNCSLQD BACU017321/1-454 RLAWYLDGQL QKASTSRLLS VGGEVFSGGT STFTVTAQRA QHELNCSLQD ENSP00000315635/1-366 RLAWYLDGQL QEASTSRLLS VGGEAFSGGT STFTVTAHRA QHELNCSLQD ENSBTAP00000017194/1-365 RLAWYLDGQL QEASTSRLLS VGREAFSGGT STFTVTAQRA QHELNCSLQD 201 250 ENSTTRP00000004047/1-364 PDSGRSANAS VLLNVQFKPE IAQVGAKYQE AQGPGLLVVL FALVRANPPA bmy_03268T0/1-454 PDSGRSANAS VLLNVQFKPE IAQVGAKYQE AQGPDLLVVL FALVRANPPA BACU017321/1-454 PDSGRSANAS VLLNVQFKPE IAQVGAKYQE AQGPGLLVVL FALVRANPPA ENSP00000315635/1-366 PRSGRSANAS VILNVQFKPE IAQVGAKYQE AQGPGLLVVL FALVRANPPA ENSBTAP00000017194/1-365 PGSGQSANAS VILNVQFKPE IAQVGAKYQE AQGPGLLVIL FALVRANPPA 251 300 ENSTTRP00000004047/1-364 NVTWIDEDGP VTVNTSDFLV LDAQNYPWLT KHTVQLQLRS LPQNLSVVAT bmy_03268T0/1-454 NVTWIDQDGP VTVNASDFLV LDAQNYPWLT KHTVQLQLRS LPHNLSVVAT BACU017321/1-454 NVTWIDQDGP VTVNASDFLV LDAQNYPWLT KHTVQLQLRS LPHNLSVVAT ENSP00000315635/1-366 NVTWIDQDGP VTVNTSDFLV LDAQNYPWLT NHTVQLQLRS LAHNLSVVAT ENSBTAP00000017194/1-365 NVTWIDQDGP VTVNTSDFLV LDAQNYPWLT NHTVQLQLRS LPHNLSVVAT 301 350 ENSTTRP00000004047/1-364 NDVGVTSASL PAPG-LATRV EMPLLGIVVA GGLALG-LVG FSTLVACLVC bmy_03268T0/1-454 NDVGVTSASL PAPGLLATRV EVPLLGIVVA GGLALGTLVG FSTLVACLVC BACU017321/1-454 NDVGVTSASL PAPGLLATRV EVPLLGIVVA GGLALGTLVG FSTLVACLVC ENSP00000315635/1-366 NDVGVTSASL PAPGLLATRV EVPLLGIVVA AGLALGTLVG FSTLVACLVC ENSBTAP00000017194/1-365 NDVGVTSSSL PAPGLLATRV EVPLLGIVVA GGLALGTLVG FSTLVACLVC 351 400 ENSTTRP00000004047/1-364 RKAKKTKGPS RRPSLISSDS NNLKLNNVRL PRENMSLPSH LQLSDLTPDS bmy_03268T0/1-454 RKAKKTKGPS RRPSLISSDS NNLKLNNVRL PRESVSLPSH LQLNDLTPDS BACU017321/1-454 RKAKKTKGPS WRPSLISSDS NNLKLNNVRL PRENMSLPSH LQLNDLAPHS ENSP00000315635/1-366 RKEKKTKGPS RHPSLISSDS NNLKLNNVRL PRENMSLPSN LQLNDLTPDS ENSBTAP00000017194/1-365 RKEKKTKGPS RRPSLISSDS NNLKVSNVRL PRENMSLPSN LQLNDLAPGC 401 450 ENSTTRP00000004047/1-364 RAGKRADQQM AQDNSQPELL DPEPGGLLTS RGFIRLPMLG YIYRVSSVSS bmy_03268T0/1-454 R-GKPADQQM AQDNSQPELL DPEPGGLLTS RGFIRLPMLG YIYRVSSVSS BACU017321/1-454 R-GKAADQQM AQDNSQPELL DPEPGGLLTS RGFIRLPMLG YIYRVSSVSS ENSP00000315635/1-366 RAVKPADRQM AQNNSRPELL DPEPGGLLTS QGFIRLPVLG YIYRVSSVSS ENSBTAP00000017194/1-365 R-GKPADRQM AQDNSRPDLL DPEPGGLLTS RGFIRLPMLG YIYRVSSVSS 451 500 ENSTTRP00000004047/1-364 DEIWL bmy_03268T0/1-454 DEIWL BACU017321/1-454 DEIWL ENSP00000315635/1-366 DEIWL ENSBTAP00000017194/1-365 DEIWL