KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:00:50 2014 Check: 00 .. Name: ENSP00000265174/1-624 Len: 624 Check: 6801 Weight: 1.00 Name: ENSBTAP00000017229/1-624 Len: 624 Check: 5480 Weight: 1.00 Name: BACU014391/1-591 Len: 624 Check: 1591 Weight: 1.00 Name: ENSTTRP00000015114/1-623 Len: 624 Check: 1152 Weight: 1.00 Name: bmy_21838T0/1-385 Len: 624 Check: 9090 Weight: 1.00 // 1 50 ENSP00000265174/1-624 MEIPGSLCKK VKLSNNAQNW GMQRATNVTY QAHHVSRNKR GQVVGTRGGF ENSBTAP00000017229/1-624 MEVPGSLCKK VKLSNNAQNW GMQRATNVTY QAHHVSRNKR GQVVGTRGGF BACU014391/1-591 MEVPGSLCKK VKLSNNAQNW ---------- ----VSRSR- ---------- ENSTTRP00000015114/1-623 MEVPGSLCKK VKLSNNAQNW GMQRATNVTY QAHHVSRNKR GQVVGTRGGF bmy_21838T0/1-385 MEVPGSLCKK VKLSNNAQNW GMQRVTNVTY QAHHVSRNKR GQVVGTRGGF 51 100 ENSP00000265174/1-624 RGCTVWLTGL SGAGKTTVSM ALEEYLVCHG IPCYTLDGDN IRQGLNKNLG ENSBTAP00000017229/1-624 RGCTVWLTGL SGAGKTTVSM ALEEYLVCHG IPCYTLDGDN IRQGLNKNLG BACU014391/1-591 --------GL SGAGKTTVSM ALEEYLVCHG IPCYTLDGDN IRQGLNKNLG ENSTTRP00000015114/1-623 RGCTVWLTGL SGAGKTTVSM ALEEYLVCHG IPCYTLDGDN IRQGLNKNLG bmy_21838T0/1-385 RGCTVWLTGL SGAGKTTVSM ALEEYLVCHG IPCYTLDGDN IRQGLNKNLG 101 150 ENSP00000265174/1-624 FSPEDREENV RRIAEVAKLF ADAGLVCITS FISPYTQDRN NARQIHEGAS ENSBTAP00000017229/1-624 FSPEDREENV RRIAEVAKLF ADAGLVCITS FISPYTQDRN NARRIHEGAS BACU014391/1-591 FSPEDREENV RRIAEVAKLF ADAGLVCITS FISPYTQDRN NARQIHEGAS ENSTTRP00000015114/1-623 FSPEDREENV RRIAEVAKLF ADAGLVCITS FISPYTQDRN NARQIHEGAS bmy_21838T0/1-385 FSPEDREENV RRIAEVAKLF ADAGLVCITS FISPYTQDRN NARQIHEGAS 151 200 ENSP00000265174/1-624 LPFFEVFVDA PLHVCEQRDV KGLYKKARAG EIKGFTGIDS EYEKPEAPEL ENSBTAP00000017229/1-624 LPFFEVFVDA PLHVCEQRDV KGLYKKARAG EIKGFTGIDS EYEKPEAPEL BACU014391/1-591 LPFFEVFVDA PLHVCEQRDV KGLYKKARAG EIKGFTGIDS EYEKPEAPEL ENSTTRP00000015114/1-623 LPFFEVFVDA PLHVCEQRDV -GLYKKARAG EIKGFTGIDS EYEKPEAPEL bmy_21838T0/1-385 LPFFEVFVDA PLHVCEQRDV KGLYKKARAG EIKGFTGIDS EYEKPEAPEL 201 250 ENSP00000265174/1-624 VLKTDSCDVN DCVQQVVELL QERDIVPVDA SYEVKELYVP ENKLHLAKTD ENSBTAP00000017229/1-624 VLKTDSCDVN DCVQQVVELL QERDIVPVDA SYEVKELYVP ENKLHLAKTD BACU014391/1-591 VLKTDSCDVN DCVQQVVELL QERDIVPVDA SYEVKELYVP ENKLHLAKTD ENSTTRP00000015114/1-623 VLKTDSCDVN DCVQQVVELL QERDIVPVDA SYEVKELYVP ENKLHLAKTD bmy_21838T0/1-385 VLKTDSCDVN DCVQQVVELL QERDIVPVDA SYEVKELYVP ENKLHLAKTD 251 300 ENSP00000265174/1-624 AETLPALKIN KVDMQWVQVL AEGWATPLNG FMREREYLQC LHFDCLLDGG ENSBTAP00000017229/1-624 AETLPALKIN KVDLQWVQVL AEGWATPLNG FMREREYLQC LHFDCLLDGG BACU014391/1-591 AETLPALKIN KVDMQWVQVL AEGWATPLNG FMREREYLQC LHFDCLLDGG ENSTTRP00000015114/1-623 AETLPALKIN KVDMQWVQVL AEGWATPLNG FMREREYLQC LHFDCLLDGG bmy_21838T0/1-385 AETLPALKIN KVDMQWVQVL AEGWATPLNG FMREREYLQC LHFDCLLDGG 301 350 ENSP00000265174/1-624 VINLSVPIVL TATHEDKERL DGCTAFALMY EGRRVAILRN PEFFEHRKEE ENSBTAP00000017229/1-624 VINLSVPIVL TATQEDKERL DGCTAFALMY EGRRVAILRN PEFFEHRKEE BACU014391/1-591 VINLSVPIVL TATQEDKERL DGCTAFALMY EGRRVAILRN PEFFEHRKEE ENSTTRP00000015114/1-623 VINLSVPIVL TATQEDKERL DGCTAFALMY EGRRVAILRN PEFFEHRKEE bmy_21838T0/1-385 VINLSVPIVL TATQEDKERL DGCTAFALMY EGRRVAILRN PEFFEHRKEE 351 400 ENSP00000265174/1-624 RCARQWGTTC KNHPYIKMVM EQGDWLIGGD LQVLDRVYWN DGLDQYRLTP ENSBTAP00000017229/1-624 RCARQWGTTC KNHPYIKMVM EQGDWLIGGD LQVLDRIYWN DGLDQYRFTP BACU014391/1-591 RCARQWGTTC KNHPYIKMVM EQGDWLIGGD LQVLDRIYWN DGLDQYRFTP ENSTTRP00000015114/1-623 RCARQWGTTC KNHPYIKMVM EQGDWLIGGD LQVLDRIYWN DGLDQYRLTP bmy_21838T0/1-385 HCARQWGTTC KNHPYIKMVM EQGDWLIGGD LQVLD----- ---------- 401 450 ENSP00000265174/1-624 TELKQKFKDM NADAVFAFQL RNPVHNGHAL LMQDTHKQLL ERGYRRPVLL ENSBTAP00000017229/1-624 TELKQKFKDM NADAVFAFQL RNPVHNGHAL LMQDTHRQLL ERGYRRPVLL BACU014391/1-591 TELKQKFKDM NADAVFAFQL RNPVHNGHAL LMQDTHKQLL ERGYRRPVLL ENSTTRP00000015114/1-623 TELKQKFKDM NADAVFAFQL RNPVHNGHAL LMQDTHKQLL ERGYRRPVLL bmy_21838T0/1-385 ---------- ---------- ---------- ---------- ---------- 451 500 ENSP00000265174/1-624 LHPLGGWTKD DDVPLMWRMK QHAAVLEEGV LNPETTVVAI FPSPMMYAGP ENSBTAP00000017229/1-624 LHPLGGWTKD DDVPLMWRMK QHAAVLEEGV LNPETTVVAI FPSPMMYAGP BACU014391/1-591 LHPLGGWTKD DDVPLMWRMK QHAAVLEEGV LNPETTVVAI FPSPMMYAGP ENSTTRP00000015114/1-623 LHPLGGWTKD DDVPLMWRMK QHAAVLEEGI LNPETTVVAI FPSPMMYAGP bmy_21838T0/1-385 ---------- ---------- ---------- ---------- ---------- 501 550 ENSP00000265174/1-624 TEVQWHCRAR MVAGANFYIV GRDPAGMPHP ETGKDLYEPS HGAKVLTMAP ENSBTAP00000017229/1-624 TEVQWHCRAR MVAGANFYIV GRDPAGMPHP ETGKDLYEPT HGAKVLTMAP BACU014391/1-591 TEVQWHCRAR MVAGANFYIV GRDPAGVPHP ETGKGLYEPT HGAKVLTMAP ENSTTRP00000015114/1-623 TEVQWHCRAR MVAGANFYIV GRDPAGMPHP ETGEGLYEPT HGAKVLTMAP bmy_21838T0/1-385 ---------- ---------- ---------- ---------- ---------- 551 600 ENSP00000265174/1-624 GLITLEIVPF RVAAYNKKKK RMDYYDSEHH EDFEFISGTR MRKLAREGQK ENSBTAP00000017229/1-624 GLITLEIVPF RVAAYNKKKK RMDYYDSEHH EDFEFISGTR MRKLAREGQK BACU014391/1-591 GLITLEIVPF RVAAYNKKKK RMDYYDSEHH EDFEFISGTR MRKLAREGQK ENSTTRP00000015114/1-623 GLITLEIVPF RVAAYNKKKK RMDYYDAEHH EDFEFISGTR MRKLAREGQK bmy_21838T0/1-385 ---------- ---------- ---------- ---------- ---------- 601 650 ENSP00000265174/1-624 PPEGFMAPKA WTVLTEYYKS LEKA ENSBTAP00000017229/1-624 PPEGFMAPKA WDVLMEYYKS LEKA BACU014391/1-591 PPEGFMAPKA WTVLMEYYKS LEKA ENSTTRP00000015114/1-623 PPEGFMAPKA WTVLMEYYKS LEKA bmy_21838T0/1-385 ---------- ---------- ----