KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:00:52 2014 Check: 00 .. Name: BACU014390/1-209 Len: 323 Check: 1522 Weight: 1.00 Name: bmy_16551T0/1-323 Len: 323 Check: 5877 Weight: 1.00 Name: ENSP00000285311/1-259 Len: 323 Check: 8499 Weight: 1.00 Name: ENSTTRP00000008781/1-259 Len: 323 Check: 8037 Weight: 1.00 Name: ENSBTAP00000017242/1-259 Len: 323 Check: 8321 Weight: 1.00 // 1 50 BACU014390/1-209 MATLMR---- ---------G KDSSRCLLLL AAVLMVE--- ---------- bmy_16551T0/1-323 MSITLKEKIK PITFPSKTTG KRKSQCQCIK KEISDIKGRK KIKGSQHFRN ENSP00000285311/1-259 MAALMR---- ---------S KDSSCCLLLL AAVLMVE--- ---------- ENSTTRP00000008781/1-259 MAALMR---- ---------G KDSSRCLLLL AAVLMVE--- ---------- ENSBTAP00000017242/1-259 MAALMR---- ---------G KDSSRCLLLL AAVLMVE--- ---------- 51 100 BACU014390/1-209 ---------- ---SSQFGSS RAKLNSIKSS ---------- ------LGGE bmy_16551T0/1-323 KTLSALPFTP QQCSSILNPK QSDRESVHRS EIFTNIDLLY NHKEGLLNSS ENSP00000285311/1-259 ---------- ---SSQIGSS RAKLNSIKSS ---------- ------LGGE ENSTTRP00000008781/1-259 ---------- ---SSQFGSS RAKLNSIKSS ---------- ------LGGE ENSBTAP00000017242/1-259 ---------- ---SSQFGSS RAKLNSIKSS ---------- ------LGGE 101 150 BACU014390/1-209 TPAQAANR-- -----SAGTY QGLAFGGSKK --GKNLGQ-- ---TDRLTVM bmy_16551T0/1-323 LKVQESSKMH LVNPYPLELQ QDMLLNNNVK FSESHINFAY PCSSDKECEV ENSP00000285311/1-259 TPGQAANR-- -----SAGMY QGLAFGGSKK --GKNLGQAY PCSSDKECEV ENSTTRP00000008781/1-259 TPAQAANR-- -----SAGTY QGLAFGGSKK --GKNLGQAY PCSSDKECEV ENSBTAP00000017242/1-259 TPAQAANR-- -----SAGTY QGLAFGGSKK --GKNLGQAY PCSSDKECEV 151 200 BACU014390/1-209 QTVTQTDTE- ---------R HECAHPAPVV ASTQRPGEGA LRALGTTTAP bmy_16551T0/1-323 GRYCHSPHQG SSACMVCRRK KKRCHRDGMC CPGTRCNNGI CIPVTESILT ENSP00000285311/1-259 GRYCHSPHQG SSACMVCRRK KKRCHRDGMC CPSTRCNNGI CIPVTESILT ENSTTRP00000008781/1-259 GRYCHSPHQG SSACMVCRRK KKRCHRDGMC CPGTRCNNGI CIPVTESILT ENSBTAP00000017242/1-259 GRYCHSPHQG SSACMVCRRK KKRCHRDGMC CPGTRCNNGI CIPVTESILT 201 250 BACU014390/1-209 PSTPFL---- -RSQNRKPVC QAARAHPQHN CQPVKAAHCP TDSGFPCFMR bmy_16551T0/1-323 AHIPALDGTR HRDGNHGHYS NHDLGWQNLG RTHTKMSHIK GHEGDPCLRS ENSP00000285311/1-259 PHIPALDGTR HRDRNHGHYS NHDLGWQNLG RPHTKMSHIK GHEGDPCLRS ENSTTRP00000008781/1-259 AHIPALDGTR HRDGNHGHYS NHDLGWQNLG RTHTKMSHIK GHEGDPCLRS ENSBTAP00000017242/1-259 PHIPALDSTR HRDRNHGHHS NHDLGWQNLG RPHTKLSHIK GHEGDPCLRS 251 300 BACU014390/1-209 GSCCS--CCA R-------PP LPRPPAQAAE RR-------- ---------- bmy_16551T0/1-323 SDCTEGFCCA RHFWTKICKP VLHPGEVCTK QRKKGSHGLE IFQRCDCAKG ENSP00000285311/1-259 SDCIEGFCCA RHFWTKICKP VLHQGEVCTK QRKKGSHGLE IFQRCDCAKG ENSTTRP00000008781/1-259 SDCIEGFCCA RHFWTKICKP VLHQGEVCTK QRKKGSHGLE IFQRCDCAKG ENSBTAP00000017242/1-259 LDCTEGFCCA RHFWTKICKP VLHQGEVCTK QRKKGSHGLE IFQRCDCAKG 301 350 BACU014390/1-209 LTTKAVLDGQ -RGKILLRLA P-- bmy_16551T0/1-323 LSCKVWKDAT YSSKARLHVC QKI ENSP00000285311/1-259 LSCKVWKDAT YSSKARLHVC QKI ENSTTRP00000008781/1-259 LSCKVWKDAT YSSKARLHVC QKI ENSBTAP00000017242/1-259 LSCKVWKDAT YSSKARLHVC QKI