KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:00:52 2014 Check: 00 .. Name: ENSBTAP00000017243/1-315 Len: 592 Check: 9424 Weight: 1.00 Name: ENSP00000338532/1-422 Len: 592 Check: 5578 Weight: 1.00 Name: bmy_07242T0/1-347 Len: 592 Check: 135 Weight: 1.00 Name: BACU004737/1-432 Len: 592 Check: 6623 Weight: 1.00 Name: ENSTTRP00000012991/1-424 Len: 592 Check: 1978 Weight: 1.00 // 1 50 ENSBTAP00000017243/1-315 MVMILSQSLD KQGADPVACR --------TF NPEPHTP--- ---------- ENSP00000338532/1-422 MVMVLSESLS TRGADSIACG --------TF SRELHTP--- ---------- bmy_07242T0/1-347 --MSPVQGPS ASGSASHGCT GCPGGRSVTF SPDLAFPLAR EAPFGPHWSF BACU004737/1-432 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012991/1-424 MVMILSKSLD KQGADPVACR --------XX XXXLHTP--- ---------- 51 100 ENSBTAP00000017243/1-315 ---------- -----KKMSQ GPTLFSCGIM ENDRWRDLDR KCPLQIDQPS ENSP00000338532/1-422 ---------- -----KKMSQ GPTLFSCGIM ENDRWRDLDR KCPLQIDQPS bmy_07242T0/1-347 PLNLSSSCCL WHSAWRRRVP APEQQSPKAG QNDRWRDLDR KCPLQIDQPS BACU004737/1-432 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012991/1-424 ---------- -----KKMSQ GPTLFSCGIM ENDRWRDLDR KYPLQVDQPS 101 150 ENSBTAP00000017243/1-315 ASIWECLPDK CQDSALWHRE AATTCAVTNL IKDLSLSDHN GHPSAPPSKR ENSP00000338532/1-422 TSIWECLPEK --DSSLWHRE AVTACAVTSL IKDLSISDHN GNPSAPPSKR bmy_07242T0/1-347 ANIWECLPDK CQDGALWHRE AATACAVTNL IKDLSLSDHN GNPSAPPSKR BACU004737/1-432 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012991/1-424 AGIWERLPDK CQDRALWRRE AATACAVTNL IKDLSLSDHS GNPSAPPSKR 151 200 ENSBTAP00000017243/1-315 QCRSLSFSDE MASCRTSWRP LGSKVWTPVE KRRCYSGGSV QRYSNGFGTM ENSP00000338532/1-422 QCRSLSFSDE MSSCRTSWRP LGSKVWTPVE KRRCYSGGSV QRYSNGFSTM bmy_07242T0/1-347 QCRSLSFSDE MSSCRTSWRP LGSKVWTPVE KRRCYSGGSV QRYSNGFSTM BACU004737/1-432 ---------- MSSCRTSWRP LGSKVWTPVE KRRCYSGGSV QRYSNGFSTM ENSTTRP00000012991/1-424 QCRSLSFSDE MSSCRTSWRP LGSKVWTPVE KRRCYSGGSV QRYSNGFSTM 201 250 ENSBTAP00000017243/1-315 QRSSSFSLPS RASTLSSPYD PAGLHPRPGG PPGPGVLGPA TCGQAGDLWG ENSP00000338532/1-422 QRSSSFSLPS RANVLSSPCD QAGLHHRFGG QPCQGVPGSA PCGQAGDTWS bmy_07242T0/1-347 QRSSSFSLPS RANVLSSPYD QAGLHPRFGG QPCQGAPGSA TCRQAGDIWG BACU004737/1-432 QRSSSFSLPS RANVLSSPYD QAGLHPRFGG QPCQGAPGSA TCRQAGDIWG ENSTTRP00000012991/1-424 QRSSSFSLPS RANVLSSPYD QAGLHHRSGG QPCQGTPGSA TCRQAGDIWG 251 300 ENSBTAP00000017243/1-315 PAASPVGGGR LDMQRSLSCS HEQFSFAEYC PPSASSTPAS TPEPARRSGG ENSP00000338532/1-422 PDLHPVGGGR LDLQRSLSCS HEQFSFVEYC PPSANSTPAS TPELARRSSG bmy_07242T0/1-347 PDPSPVGGAR LDMQRSLSCS HEQFSFAEYC SPSASSTPAS TPELARRSSG BACU004737/1-432 PDPSPVGGAR LDMQRSLSCS HEQFSFAEYC PPSASSTPAS TPELARRSSG ENSTTRP00000012991/1-424 PDPSPVGGAR LDMQRSLSCS HEQFSFAEYC PPSASSTPAS TPELARRSSG 301 350 ENSBTAP00000017243/1-315 LARSRSQPCV LNDKKVGIKR RRPEEAQEQR PSLDLAKMAQ ---------- ENSP00000338532/1-422 LSRSRSQPCV LNDKKVGVKR RRPEEVQEQR PSLDLAKMAQ ---------- bmy_07242T0/1-347 LSRSRSQPCV LNDKKVGVKR RRPEEAQEQR PSLDLAKMAQ ---------- BACU004737/1-432 LSRSRSQPCV LNDKKVGVKR RRPEEAQEQR PSLDLAKMAQ SEKSTSRLAA ENSTTRP00000012991/1-424 LSRSRSQPCV LNDKKVGVKR RRPEEAQEQR PSLDLAKMAQ ---------- 351 400 ENSBTAP00000017243/1-315 ---------- ---------- ---------- ---------- ---------- ENSP00000338532/1-422 ---------- ---------- ---------- ---------- ---------- bmy_07242T0/1-347 ---------- ---------- ---------- ---------- ---------- BACU004737/1-432 GWGAAEGSAA AVSVGSLFRS LMTIILEILR SCCQMRWPET ILAISQPSLK ENSTTRP00000012991/1-424 ---------- ---------- ---------- ---------- ---------- 401 450 ENSBTAP00000017243/1-315 ---------- ---------- ---------- ---------- ---------- ENSP00000338532/1-422 ---------- ---------- ---------- ---------- ---------- bmy_07242T0/1-347 ---------- ---------- ---------- ---------- ---------- BACU004737/1-432 EHGTIAMLIN PGKSISHLRV VNSDNRWEPC KAAGPPVASH GPEVLRERKA ENSTTRP00000012991/1-424 ---------- ---------- ---------- ---------- ---------- 451 500 ENSBTAP00000017243/1-315 ---------- ---------- ---------- ---------- ---------- ENSP00000338532/1-422 ---------- ---------- --NCQTFSSL SCLSAGTEDC GPQSPFARHV bmy_07242T0/1-347 ---------- ---------- --KC------ ---------- ----SFPLHT BACU004737/1-432 ISKAAINFFP QSVGSCSLVF SWNCQTFSSL SCLSAGTEDR GPHSPFALHI ENSTTRP00000012991/1-424 ---------- ---------- --NCQTFSSL SCLSAGTEDR GPHSPFALHV 501 550 ENSBTAP00000017243/1-315 ---------- ---------- ---------- ---------- ---------- ENSP00000338532/1-422 SNTRAWTALL SASGPGGRTP AGTPVPEPLP PSFDDHLACQ EDLSCEESDS bmy_07242T0/1-347 C--------- ---------- ---------- ---------- ---------- BACU004737/1-432 SSTRSWTALL SASGTGGRTP AGTPIPEPLP PSLDDHPACQ EEPCCEEAGG ENSTTRP00000012991/1-424 SSTRSWTALL SASGTGGRTP AGTPIPEPLP PSLDDHPACQ EEPCCEEAGG 551 600 ENSBTAP00000017243/1-315 ---------- ---------- -------SEL QSRLGLRE-- -- ENSP00000338532/1-422 CALDEDCGRR AEPAAAWRDR GAPGNSLCSL DGELDIEQIE KN bmy_07242T0/1-347 ---------- ---------- ---------- ---------- -- BACU004737/1-432 CALGEGCGGR GEPGTAWRDR GAVRNSPCSL DGELDIEQIE NN ENSTTRP00000012991/1-424 CALGEGCGGR GEPGTAWRDH GAVCNSPCSL DGELDIEQIE NN