KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:00:52 2014 Check: 00 .. Name: ENSP00000333212/1-544 Len: 563 Check: 5579 Weight: 1.00 Name: ENSBTAP00000017246/1-543 Len: 563 Check: 1799 Weight: 1.00 Name: bmy_15293T0/1-559 Len: 563 Check: 7982 Weight: 1.00 Name: BACU014394/1-525 Len: 563 Check: 9994 Weight: 1.00 // 1 50 ENSP00000333212/1-544 MSSPGPSQPP AEDPPWPARL LRAPLGLLRL DPSGGALLLC GLVALLGWSW ENSBTAP00000017246/1-543 MASPGLPQPP TEDAAWPLRL LHAPPGLLRL DPTGGALLLL VLAALLGWSW bmy_15293T0/1-559 MACAGLPQAP AEDSPWPLRL LHAPPGLLRL DPTGGALLLL VLAALLGWSW BACU014394/1-525 MASAGLPQAP VEDSPWPLRL LHAPPGLLRL DPTGGALLLL VLAALLGWSW 51 100 ENSP00000333212/1-544 LRRRRARGIP PGPTPWPLVG NFGHVLLPPF LRRRSWLSSR TRAAGIDPSV ENSBTAP00000017246/1-543 LWRLPERGIP PGPAPWPVVG NFGFVLLPRF LRRKSWPYRR ARNGGMNASG bmy_15293T0/1-559 LWRRPKRGIP PGPTPWPVVG NFGFVLLPPF LRRKSWPYRR ARTGELNTSG BACU014394/1-525 LWRLPKRGIP PGPTPWPVVG NFGFVLLPPF LRRKSWPYRR ARTGELNTSG 101 150 ENSP00000333212/1-544 IGPQVLLAHL ARVYGSIFSF FIGHYLVVVL SDFHSVREAL VQQAEVFSDR ENSBTAP00000017246/1-543 QGVQLLLADL GRVYGNIFSF FIGHYLVVVL NDFHSVREAL VQQAEVFSDR bmy_15293T0/1-559 LGVQLLLADL ARVYGNIYSF FIGHYLVVVL NDFHSVREAL VQQAEVFSDR BACU014394/1-525 LGVQLLLADL ARVYGNIYSF FIGHYLVVVL NDFHSVREAL VQQAEVFSDR 151 200 ENSP00000333212/1-544 PRVPLISIVT KEK------- -------GVV FAHYGPVWRQ QRKFSHSTLR ENSBTAP00000017246/1-543 PRVPLTSIMT KGK------- -------GIV FAHYGPVWRQ QRKFSHSTLR bmy_15293T0/1-559 PRMPLNYILT KGKALLFLTF FPWCPFAGIV FAHYGPVWRQ QRKFSHSTLR BACU014394/1-525 PRMPLSYILT KGK------- -------GIV FAHYGPVWRQ QRKFSHSTLR 201 250 ENSP00000333212/1-544 HFGLGKLSLE PKIIEEFKYV KAEMQKHGED PFCPFSIISN AVSNIICSLC ENSBTAP00000017246/1-543 HFGLGKLSLE PKIIEEFRYV KEEMQKHGDA PFNPFPIVNN AVSNIICSLC bmy_15293T0/1-559 HFGLGKLSLE PKIIEEFKYV KEEMQKNGEV LFNPFPIVNN AVSNIICSLC BACU014394/1-525 HFGLGKLSLE PRIIEEFKYV KEEMQKNGEV LFNPFPIVNN AVSNIICSLC 251 300 ENSP00000333212/1-544 FGQRFDYTNS EFKKMLGFMS RGLEICLNSQ VLLVNICPWL YYLPFGPFKE ENSBTAP00000017246/1-543 FGRRFDYTNS EFKQMLNFMS RALEVCLNTQ LLLVNICSWL YYLPFGPFKE bmy_15293T0/1-559 FGQRFDYTNS EFKKMLNFMS RALEICLNTQ LLLVNICSWL YYLPFGPFKE BACU014394/1-525 FGQRFDYTNS EFKKMLNFMS RALEICLNTQ LLLVNICSWL YYLPFGPFKE 301 350 ENSP00000333212/1-544 LRQIEKDITS FLKKIIKDHQ ESLDRENPQD FIDMYLLHME EERKNNSNSS ENSBTAP00000017246/1-543 LRQIEKDLTL FLKKIIKDHR ESLDVENPQD FIDMYLLHVE EEKKNNSNSG bmy_15293T0/1-559 LRQIEKDLTI FLKKIIKDHR ESLDVENPQD FIDMYLLHVE EERKNNSNSS BACU014394/1-525 LRQIEKDLTI FLKKIIKDHR ESLDVENPQD FIDMYLLHVE EERKNNSNSS 351 400 ENSP00000333212/1-544 FDEEYLFYII GDLFIAGTDT TTNSLLWCLL YMSLNPDVQE KVHEEIERVI ENSBTAP00000017246/1-543 FDEDYLFYII GDLFIAGTDT TTNSLLWCLL YMSLHPNIQE KIHEEIARVI bmy_15293T0/1-559 FDEDYLFYII GDLFIAGTDT TTNSLLWCLL YMSLNPDIQE KVHEEIERVI BACU014394/1-525 FDEDYLFYII GDLFIAGTDT TTNSLLWCLL YMSLNPDIQE KVHEEIERVI 401 450 ENSP00000333212/1-544 GANRAPSLTD KAQMPYTEAT IMEVQRLTVV VPLAIPHMTS ENT-----VL ENSBTAP00000017246/1-543 GADRAPSLTD KAQMPYTEAT IMEVQRLSTV VPLSIPHMTS EKT-----VL bmy_15293T0/1-559 GGDRAPSLTD KARMPYTEAT IMEVQRLSVV VPLSIPHMTS EKTGKSRAFL BACU014394/1-525 GGDRAPSLTD KARMPYTEAT IMEVQRLSVV VPLSIPHMTS EKTGKSRAFL 451 500 ENSP00000333212/1-544 QGYTIPKGTL ILPNLWSVHR DPAIWEKPED FYPNRFLDDQ GQLIKKETFI ENSBTAP00000017246/1-543 QGFTIPKGTI ILPNLWSVHR DPAIWEKPND FYPDRFLDDQ GQLIKKETFI bmy_15293T0/1-559 LGTPLREARP LHPE---DLR DPAIWEKPND FYPNRFLDDQ GQLIKKETFI BACU014394/1-525 LGTPLREGRP LHPE---DLR DPAIWEKPND FYPNRFLDDQ GQLIKKETFI 501 550 ENSP00000333212/1-544 PFGIGKRVCM GEQLAKMELF LMFVSLMQSF AFALPEDSKK PLLTGRFGLT ENSBTAP00000017246/1-543 PFGIGKRVCM GEQLAKMELF LMFVSLMQSF TFVLPKDS-K PILTGKYGLT bmy_15293T0/1-559 PFGIGKRVCM GEQLAKMELF LMFVSLMQSF TFALPKDS-K PILTGKYGLT BACU014394/1-525 PFGIGKS--- KERNKEAGMY ----GRAAGK DGIIPDVR-E P--NAEFHIC 551 600 ENSP00000333212/1-544 LAPHPFNITI SRR ENSBTAP00000017246/1-543 LAPHPFNIII SKR bmy_15293T0/1-559 LAPHPFNIII SKR BACU014394/1-525 FA-------- ---