KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:00:53 2014 Check: 00 .. Name: ENSP00000343636/1-394 Len: 636 Check: 7493 Weight: 1.00 Name: ENSBTAP00000017248/1-324 Len: 636 Check: 1409 Weight: 1.00 Name: ENSTTRP00000003634/1-385 Len: 636 Check: 4644 Weight: 1.00 Name: bmy_17914T0/1-556 Len: 636 Check: 4127 Weight: 1.00 Name: BACU018808/1-364 Len: 636 Check: 428 Weight: 1.00 // 1 50 ENSP00000343636/1-394 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000017248/1-324 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000003634/1-385 ---------- ---------- ---------- ---------- ---------- bmy_17914T0/1-556 FFCTLVYLIH ETRDHASALF FHRALCRLLE AGVEAEALLW IVTVKKVVGE BACU018808/1-364 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000343636/1-394 ---------- -----MIVFI FLAMGLSLEN EYTSQTNNCT YLREQCLRDA ENSBTAP00000017248/1-324 ---------- -----PLIVV IQAVGLCL-N KSASQTTDCT YLRELCLSDA ENSTTRP00000003634/1-385 ---------- ---------- ---VGLCLDN ESTSQTIDCT YLRELCLSDA bmy_17914T0/1-556 RHLLFFQVNS PKLATMIVFI FFAVGLCLDN ESTSQTIDCT YLRELCLSDA BACU018808/1-364 ---------- ---------- ---VGLCLDN ESTSQTIDCT YLRELCLSDA 101 150 ENSP00000343636/1-394 NGCKHAWRVM EDACNDSDPG DPCKMRNSSY CNLSIQYLVE SNFQFKECLC ENSBTAP00000017248/1-324 DGCKHAWRIM EDACNVS--G NTCQMKNSSS CGLSIQSLVE SNLQFKDCLC ENSTTRP00000003634/1-385 DGCKHAWRIM EDACNVSDPG NPCQMKDSST HN-SIWSLAE SNFQFKNCLC bmy_17914T0/1-556 DGCKHAWRIM EDACNVS--G NPCQMKDSSS CNLSIRSLAE SNFQFKNCVC BACU018808/1-364 DGCKHAWRIM EDACNVS--G NPCQMKDSSS CNLSIRSLAE SNFQFKNCLC 151 200 ENSP00000343636/1-394 TDDFYCTVNK LLGKKCINK- ---------- ---------- ---------- ENSBTAP00000017248/1-324 FDDLYCTFNK LLGKKCINE- ---------- ---------- ---------- ENSTTRP00000003634/1-385 SDDLYCTIKK LLGKKCINK- ---------- ---------- ---------- bmy_17914T0/1-556 SDDLYCTIKK LLGKKCINKS VCVSKPMQYR SCTLNSASKN ALAVFKDEYP BACU018808/1-364 SDDLYCTIKK LLGKKCINK- ---------- ---------- ---------- 201 250 ENSP00000343636/1-394 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000017248/1-324 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000003634/1-385 ---------- ---------- ---------- ---------- ---------- bmy_17914T0/1-556 RGKSYFGKNE ESALSSYLAA QSNITQWLHQ KDTSLMIEKK SYCVMAARIC BACU018808/1-364 ---------- ---------- ---------- ---------- ---------- 251 300 ENSP00000343636/1-394 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000017248/1-324 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000003634/1-385 ---------- ---------- ---------- ---------- ---------- bmy_17914T0/1-556 QESEHCALLY ENFKKTCGRE SEQCKTLDGS YLCSALRESL KETILWNCQC BACU018808/1-364 ---------- ---------- ---------- ---------- ---------- 301 350 ENSP00000343636/1-394 ---------- ---------- ---------- ---------- -----SDNVK ENSBTAP00000017248/1-324 ---------- ---------- ---------- ---------- -----SDNIK ENSTTRP00000003634/1-385 ---------- ---------- ---------- ---------- -----SNNMK bmy_17914T0/1-556 NDPSEAKCIE IWKSLFEDIC IQDAQMNPVP AFSEDNEDEF NLDIVSDNMK BACU018808/1-364 ---------- ---------- ---------- ---------- -----SDNMK 351 400 ENSP00000343636/1-394 ED-KFKWNLT TRSHHGFKGM WSCLEVAEAC VGDVVCNAQL ASYLKACSAN ENSBTAP00000017248/1-324 EDNKYKWNLT TLSYHGGRGV QSCLEVAEVC IGDALCNAQL ALYLKACSAD ENSTTRP00000003634/1-385 EDNKFKWNLT TLSYHGIRGI RSCLEVAEEC VADVLCNTQL ALYLKACSAN bmy_17914T0/1-556 EDNKFKWNLT TLSYHGIREI RSCLEVAKEC VADVLCNTQL ALYLKACSAN BACU018808/1-364 EDNKFKWNLT TLSYHGVRGI KSCLEVAKEC VADVLCNTQL ALYLKACSAN 401 450 ENSP00000343636/1-394 GNPCDLKQCQ AAIRFFYQNI PFNIAQMLAF CDCAQSDIPC QQSKEALHSK ENSBTAP00000017248/1-324 GKLCDVKHCQ AAIRFFYQNM PFNIAQMLAF CDCAPADEPC QQSREALHSR ENSTTRP00000003634/1-385 GNLCDVKHCQ AAIQFFYQNM PFNTAQMLAF CDCAPSDVPC QQSREALHSK bmy_17914T0/1-556 GNLCDVKHCQ AAIQFFYQNM PFNTAQMLAF CDCAPSDVPC QQSREALHSK BACU018808/1-364 GNLCDVKHCQ AAIQFFYQNM PFNTAQMLAF CDCAPSDVPC QQSREALHSK 451 500 ENSP00000343636/1-394 TCAVNMVPPP TCLSVIRSCQ NDELCRRHYR TFQSKCWQRV TRKCHEDENC ENSBTAP00000017248/1-324 PCAVNRVPTP TCLDVIHSCQ DDELCRRRYR IFQAKCWQHV MRKCHEDETC ENSTTRP00000003634/1-385 PCAVNRVPAP TCLDIIHSCQ NDELCRRRYR TFQAKCWQHV IRKCHEDETC bmy_17914T0/1-556 PCAVNRVPAP TCLDIIHSCQ NDELCRRRYR TFQAKCWQRV IRKCHEDETC BACU018808/1-364 SCAVNRVPAP TCLDIIHSCQ NDELCRRRYR TFQAKCWQRV IRKCHEDETC 501 550 ENSP00000343636/1-394 ISTLSKQDLT CSGSDDCKAA YIDILGTVLQ VQCTCRTITQ SEESLCKIFQ ENSBTAP00000017248/1-324 IGTLSKQDLA CSGSDDCKAA YIGTLGTVLQ GQCTCRTITQ SEESLCKTFQ ENSTTRP00000003634/1-385 ISTLSKQDLT CSGSNDCKAA YIGTLGTVLQ MQCTCRTITQ SEESLCKIFQ bmy_17914T0/1-556 IXTLSKQDLT CSGSNDCKAA YIGTLGTVLQ VQCTCRTTTQ SEESLCKIFQ BACU018808/1-364 ISTLSKQDLT CSGSNDCKAA YIGTLGTVLQ VQCTCRTTTQ SEESLCKIFQ 551 600 ENSP00000343636/1-394 HMLHRKSCFN YPTLSNVKGM ALYTRKHANK ITLTGFHSPF NGEVIYAAMC ENSBTAP00000017248/1-324 HMLHRKSCFN NKPTQNLK-- ---------- ---------- ---------- ENSTTRP00000003634/1-385 HMLHRKSCFN YLTLHNVKGI ALHKGKHAKE ITLSGFHSPF N-EVIYAVMC bmy_17914T0/1-556 HMLHRKSC-- ---------- ---------- ---------- ---------- BACU018808/1-364 HMLHRKSCFN YLTLHNVKGI ALHKGKHAKE ITLSGFHSPF N-EVIYAVMC 601 650 ENSP00000343636/1-394 MTVTCGILLL VMVKLRTSRI SSKARDPSSI QIPGEL ENSBTAP00000017248/1-324 ---------- ---------- ---------- ------ ENSTTRP00000003634/1-385 MAVTCGILLL VMVKLRTFRI SSKTRDPSPI QIPGGL bmy_17914T0/1-556 ---------- ---------- ---------- ------ BACU018808/1-364 MTVICGILLL VMVKLR---- ---------- ------