KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:00:53 2014 Check: 00 .. Name: BACU018356/1-319 Len: 350 Check: 9671 Weight: 1.00 Name: ENSTTRP00000000347/1-319 Len: 350 Check: 8842 Weight: 1.00 Name: ENSP00000361635/1-309 Len: 350 Check: 9020 Weight: 1.00 Name: ENSBTAP00000017251/1-294 Len: 350 Check: 2026 Weight: 1.00 Name: bmy_10651T0/1-283 Len: 350 Check: 2776 Weight: 1.00 // 1 50 BACU018356/1-319 ---------- ---------- ------MCIP PSYADLGKAA RDIFNQGFGF ENSTTRP00000000347/1-319 ---------- ---------- ------MCIP PSYADLGKAA RDIFNKGFGF ENSP00000361635/1-309 MSWCNELRLP ALKQHSIGRG LESHITMCIP PSYADLGKAA RDIFNKGFGF ENSBTAP00000017251/1-294 ---------- -----MATYG QNCARPMCIP PSYADLGKAA RDIFNKGFGF bmy_10651T0/1-283 ---------- ---------- ------MCIP PSYADLGKAA RDIFNKGFGF 51 100 BACU018356/1-319 GLVKLDVKTK SCSGVEFSTS GSSNADTGKV TGTLETKYKW CECGLTFTEK ENSTTRP00000000347/1-319 GLVKLDVKTK SCSGVEFSTS GSSNTDTGKV TGTLETKYKW CEYGLTFTEK ENSP00000361635/1-309 GLVKLDVKTK SCSGVEFSTS GSSNTDTGKV TGTLETKYKW CEYGLTFTEK ENSBTAP00000017251/1-294 GLVKLDVKTK SCSGVEFSTS GSSNTDTGKV TGTLETKYKW CEYGLTFTEK bmy_10651T0/1-283 GLVKLDVKTK SCSGVEFSTS GSSNTDTGKV TGTLETKYKW CEYGLTFTEK 101 150 BACU018356/1-319 CNTDN---TE IALEDQICQG LKLTFDTTFS PN-GKKSGKI KSSYKRGCIN ENSTTRP00000000347/1-319 WNTDNTLGTE IAIEDQICQG LKLTFDTTFS PNTGKKSGKI KSSYKRECMN ENSP00000361635/1-309 WNTDNTLGTE IAIEDQICQG LKLTFDTTFS PNTGKKSGKI KSSYKRECIN ENSBTAP00000017251/1-294 WNTDNTLGTE IAIEDQICQG LKLTFDTTFS PNTGKKSGKI KSSYKRECIN bmy_10651T0/1-283 WNTDNTLGTE IAIEDQICQG LKLTFDTTFS PNTGKKSGKI KSSYKRECIN 151 200 BACU018356/1-319 LGCGVDFDFA GLAIHGXXXX XGFGYEGWLA GYQMTFDSAK SKLTRNNLAV ENSTTRP00000000347/1-319 LGCDVDFDFA GPAIHGSAV- --FCYEGWLA GYQMTFDSAK SKLTRNNFAV ENSP00000361635/1-309 LGCDVDFDFA GPAIHGSAV- --FGYEGWLA GYQMTFDSAK SKLTRNNFAV ENSBTAP00000017251/1-294 LGCDVDFDFA GPAIHGSAV- --FGYEGWLA GYQMTFDSAK SKLTRNNFAV bmy_10651T0/1-283 LGCDVDFDFA GPAIHGSAV- --FGYEGWLA GYQMTFDSAK SKLTRNNFAV 201 250 BACU018356/1-319 GYRTGDFQLH TKVSDGPEFG GSVYQKVCED LDTSVNLAWT SGTNCTRFGI ENSTTRP00000000347/1-319 GYRTGDFQLH TNVNDGTEFG GSIYQKVCED LDTSVNLAWT SGTNCTRFGI ENSP00000361635/1-309 GYRTGDFQLH TNVNDGTEFG GSIYQKVCED LDTSVNLAWT SGTNCTRFGI ENSBTAP00000017251/1-294 GYRTGDFQLH TNVNDGTEFG GSIYQKVCED LDTSVNLAWT SGTNCTRFGI bmy_10651T0/1-283 GYRTGDFQLH TNVNDGTEFG GSIYQKVCED LDTSVNLAWT SGTNCTRFGI 251 300 BACU018356/1-319 VAKYRLDLTA SISAKVNNSS LVGMGYTQTL RPGVKLKLSA LVDGKSINAG ENSTTRP00000000347/1-319 AAKYQLDPTA SISAKVNNSS LIGVGYTQTL RPGVKLTLSA LVDGKSINAG ENSP00000361635/1-309 AAKYQLDPTA SISAKVNNSS LIGVGYTQTL RPGVKLTLSA LVDGKSINAG ENSBTAP00000017251/1-294 AAKYQLDPTA SISAKVNNSS LIGVGYTQTL RPGVKLTLSA LVDGKSINAG bmy_10651T0/1-283 AAKYQLDPTA SISAKVNNSS LIGVGYTQTL RPGVKLTLSA LVDGKSINAG 301 350 BACU018356/1-319 GH-LGLPWSW RNPAERNLWE WISEDMALIY FQCDQQASPA STQEGDQNKG ENSTTRP00000000347/1-319 GHKLGPWSWR LNPAERNLWE WTSEDLALIY FQCDQQASPP --QEGDQNKG ENSP00000361635/1-309 GHKVG----- ---------- -----LAL-- ---ELEA--- ---------- ENSBTAP00000017251/1-294 GHKLG----- ---------- -----LAL-- ---ELEA--- ---------- bmy_10651T0/1-283 GHKLG----- ---------- -----LAL-- ---ELEA--- ----------