KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:00:54 2014 Check: 00 .. Name: ENSP00000338627/1-736 Len: 746 Check: 4290 Weight: 1.00 Name: ENSBTAP00000017256/1-729 Len: 746 Check: 5528 Weight: 1.00 Name: bmy_06390T0/1-415 Len: 746 Check: 9389 Weight: 1.00 Name: BACU002207/1-569 Len: 746 Check: 3105 Weight: 1.00 // 1 50 ENSP00000338627/1-736 MKTEAQPSTS LLANTSWTGT VISDSVPGSQ TWEDKGSLTR SATSWTSEAQ ENSBTAP00000017256/1-729 ITTDAQASGT SLAKVS---- -SAESSPGSH ALEDKGTATW SLTAWVSEVQ bmy_06390T0/1-415 MTTEAQASES SLAKAS---- -SAESSLGSQ TWEDKGVGAW SLTAWVSEVQ BACU002207/1-569 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000338627/1-736 VSAARVA--- -------EAQ ARTSQPKQIS VLEALTASAL NQKPTHEKVQ ENSBTAP00000017256/1-729 AFEARAVRAQ AWETQAFEAQ SRASHPKATP VTEAEAAPVL KQRLLPEKVQ bmy_06390T0/1-415 ALEARAARAQ AWETQACEAQ SRASQPKPTS VSGVEAAPVL KQRLLPAKVQ BACU002207/1-569 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000338627/1-736 MTEKKESEVL LARPFWSSKT EYILAQVGFS MKPSCLWRFA YLWLNSGGCS ENSBTAP00000017256/1-729 VPEKEKSEVL ITRPFWSNKA EYLLAQMGYT MRPASLWSFC YLWLHSGGGI bmy_06390T0/1-415 VPEKEKSEVL FTRPFWSSKV EYILAQVGYS MRPGSLWHFC YLWLHSGGCS BACU002207/1-569 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000338627/1-736 FAAIYIFMLF LVGVPLLFLE MAAGQSMRQG GMGVWKIIAP WIGGVGYSSF ENSBTAP00000017256/1-729 FLIIYIFLLF LIGIPLLFLE MAAGQRMRQG NIGVWKVISP WIGGVGYTSF bmy_06390T0/1-415 FLIIYIFLLL LLGVPLLFLE MAAGQRTRQG TIGVWKVISP WIGGVGYTSF BACU002207/1-569 ---------- ---------- MAAGQRTRQG TIGVWKVISP WIGGVGYTSF 201 250 ENSP00000338627/1-736 MVCFILGLYF NVVNSWIIFY MSQSFQFPVP WEKCPLTMNS SGFDPECERT ENSBTAP00000017256/1-729 MVCFINGLFL NVVTAWILFY LSQSFQYPVP WEKCPLLENA SGFDPECART bmy_06390T0/1-415 MVCFITGLYL NVVSAWTLFY LGQSFQFPVP WEKCPLLKNS SGFDPECART BACU002207/1-569 MVCFITGLYL NVVSAWTLFY LGQSFQFPVP WEKCPLLKNS SGLDPECART 251 300 ENSP00000338627/1-736 TPSIYFWYQQ ALKASDRIED GGSPVYSLVL PFFLCWCLVG AFMINGLKST ENSBTAP00000017256/1-729 TPTLYFWYRM TLKASDSIED DGPPVFSLCL PLFLSVCLLG VFMLNGLKWT bmy_06390T0/1-415 TPSLYFWYRM TLKASDRIED GGPPVFSLSL PLFVSLCILG ALMINGLKST BACU002207/1-569 TPSLYFWYRM TLKASDRIED GGPPVFSLSL PLFVSLCILG ALTINGLKST 301 350 ENSP00000338627/1-736 GKVIYVLVLL PCFIIVGFFI RTLLLEGAKF GLQQLVVAKI SDVYNMSVWS ENSBTAP00000017256/1-729 GKVMCVLVSS SGLIMLCFVV RSIMLEGAVF GLHYMTIVKI SAIYNVNVWR bmy_06390T0/1-415 GKVIYVLVSL SYLIILCFII RSILLDGAVF GLRYLAVIKI SDMYNVNVWY BACU002207/1-569 GKVIYVLVSL SYLIILCFII RSILLDGAVF GLRYLAVIKI SDMYNVNVWY 351 400 ENSP00000338627/1-736 LAGGQVLSNT GIGLGSVASL ASYMPQSNNC LSDAFLVSVI NLLTLLVFTS ENSBTAP00000017256/1-729 GAGNQVLCSL GLGFGSIISI ASHIQSSSSC LNDAVIVALA NLISMMLVTP bmy_06390T0/1-415 RAGNQVLFSL GLGFGSIVSI SSHMQPSNSC LSDAFVVALA NLVSMLLFTP BACU002207/1-569 RAGNQVLFSL GLGFGSVVSI SSHMQPSNSC LSDAFVVALA NLVSMLLFTP 401 450 ENSP00000338627/1-736 FNFCVLGFWA TVITHRCCER NAEILLKLIN LGKLPPDAKP PVNLLYNPTS ENSBTAP00000017256/1-729 FIFSVLGFWA TQLTHRCNEK NTETLLNLVN MGILPPEAQP PQNLIGNPTS bmy_06390T0/1-415 FIFSVLGFWA TVLTHRCSEK ---------- ---------- ---------- BACU002207/1-569 FICSVLGFWA TVLTHRCSEK NTETLLKLVT LGILPPEAQP PQNLNGDPTS 451 500 ENSP00000338627/1-736 IYNAWLSGLP QHIKSMVLRE VTECNIETQF LKASEGPKFA FLSFVEAMSF ENSBTAP00000017256/1-729 IFTSWFNSLS NPIKKEVLSH VPECNLEEQF LKIKESTNFA FLPFVEAMSF bmy_06390T0/1-415 ---------- ---------- ---------- ---------- ---------- BACU002207/1-569 IFTSWFNSLS NPIKRKVLRH VPECNLEKQF LKVRESTNFA FLAFIEAMSF 501 550 ENSP00000338627/1-736 LPPSVFWSFI FFLMLLAMGL SSAIGIMQGI ITPLQDTFSF FRKHTKLLIV ENSBTAP00000017256/1-729 IPGSVFLSFL FFLMLLNLEM STMIGIMDSI ITSLQDIFIS VQKYTKLFTV bmy_06390T0/1-415 ---------- ---------- ---------- ---------- ---------- BACU002207/1-569 IPGSVFWSFL FFLMLLTMGM TTMIGIMQGI ITPLQDTFTS FQKYTKPFTV 551 600 ENSP00000338627/1-736 GVFLLMFVCG LFFTRPSGSY FIRLLSDYWI VFPIIVVVVF ETMAVSWAYG ENSBTAP00000017256/1-729 VVLMIMFLCG LFFTRPSGSY YIRLLTDYWT ILPIIIVIIF ENLAVKWARE bmy_06390T0/1-415 ---------- ---------- ---------- ---------- ---------- BACU002207/1-569 VVFLLMFLCG LFFTRPSGSY YIRLLADYWT VLPVIIIIIF ENLAVSWASE 601 650 ENSP00000338627/1-736 ARRFLADLTI LLGHPISPIF GWLWPHLCPV VLLIIFVTMM VHLCMKPITY ENSBTAP00000017256/1-729 ASSFFADMAN LWGHPMYSII RWLWSYLIPV VLLALSVTTV FQLSLKNITY bmy_06390T0/1-415 ---------- ---------- ---------- ---------- ---------- BACU002207/1-569 ARSFFADLAN LWGHPVYPII RWLWSCLNPI VLLVLFVTTV FHLSLKTITY 651 700 ENSP00000338627/1-736 MSWDSSTSKE VLRPYPPWAL LLMITLFAIV ILPIPAYFVY CRIHRIPFRP ENSBTAP00000017256/1-729 LAWDSSTSKE IVRQYPSWGL FTLFALLLIV ILPIPIYFVY CFTHGIPFNS bmy_06390T0/1-415 ---------- ---------- ---------- ---------- ---------- BACU002207/1-569 LAWDSSTSKE VVRRYPSWGL FAMIALLLIV ILPIPTYFVY CLTHGIPVTS 701 750 ENSP00000338627/1-736 KSGDGPMTAS TSLPLSHQLT PSKEVQKEEI LQVDETKYPS TCNVTS ENSBTAP00000017256/1-729 TSWDKPVISS KSLPLSFQLT PIKEVENEEI LQGD------ ------ bmy_06390T0/1-415 ---------- ---------- ---------- ---------- ------ BACU002207/1-569 TRWDKPVISS RSLPISVQLT PIKEVQKEEI LQGD------ -IQIAD