KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:00:54 2014 Check: 00 .. Name: ENSBTAP00000017258/1-366 Len: 401 Check: 2459 Weight: 1.00 Name: bmy_19889T0/1-352 Len: 401 Check: 9200 Weight: 1.00 Name: BACU000377/1-366 Len: 401 Check: 3379 Weight: 1.00 Name: ENSTTRP00000003383/1-367 Len: 401 Check: 7306 Weight: 1.00 // 1 50 ENSBTAP00000017258/1-366 ---------- --------MN VIYPLAVPKG RRLCCEVCDA PAE------- bmy_19889T0/1-352 MCPRQATVLE TENTVCRSMN VIYPLAVPKG RRLCCEVCEA PAERGWAGSR BACU000377/1-366 ---------- --------MN VIYPLAVPKG RRLCCEVCEA PAE------- ENSTTRP00000003383/1-367 ---------- --------MN VIYPLAVPKG RRLCCEVCEA PAE------- 51 100 ENSBTAP00000017258/1-366 --RVCGACT- ------VTYY CGVVHQRADW GSIHEKICQL LIPLRTSMPF bmy_19889T0/1-352 ARRISGQAKR KDNEVHVFVV SGVVHQRADW GSIHEKICQL LIPLRTSMPF BACU000377/1-366 --RVCGACT- ------VTYY CGVVHQRADW GSIHEKICQL LIPLRTSMPF ENSTTRP00000003383/1-367 --RVCRACT- ------VTYY CGVVHQRADW GSIHEKICQL LIPLRTSMPF 101 150 ENSBTAP00000017258/1-366 YNSEEERQHG LQQLQQRQKH LIELCYTVAQ KYIFEGKHED AVPAALHSLR bmy_19889T0/1-352 YNSEEERQHG LQQLQQRQKH LIEFCYTVAQ KYIFEGKHED AVPAALHSLR BACU000377/1-366 YNSEEERQHG LQQLQQRQKH LIEFCYTVAQ KYIFEGKHED AVPAALHSLR ENSTTRP00000003383/1-367 YNSEEERQHG LQQLQQRQKH LIEFCYTVAQ KYIFEGKHED AVPAALHSLR 151 200 ENSBTAP00000017258/1-366 FRMNVHGLSS VELVPAYLLL AEASLGLGRV VQAEEYLSQA QWTVLKSTEC bmy_19889T0/1-352 FRMSVHGLSS VELVPAYLLL AEASLGLGRI VQAEEYLSQA QWTVLKSTEC BACU000377/1-366 FRMSVHGLSS VELVPAYLLL AEASLGLGRI VQAEEYLSQA QWTVLKSTEC ENSTTRP00000003383/1-367 FRMSVHGMSS VELVPAYLLL AEASLGLGRI VQAEEYLSQA QWTVLKSAEC 201 250 ENSBTAP00000017258/1-366 SYAIHSLLHR NLGLLYMAKE NYEEARYHLA NDIYFASCAF GTEHIRASGG bmy_19889T0/1-352 CYATHSLLHR NLGLLYMAKE NYEEARYHLA ND-------- ---------- BACU000377/1-366 CYATHSLLHR NLGLLYMAKE NYEEARYHLA NDIYFTSCAF GTEHIRTSGG ENSTTRP00000003383/1-367 SYATHSLLHR NLGLLYMAKE NYEEARYHLA NDIYFASCAF GTEHIRTSGG 251 300 ENSBTAP00000017258/1-366 YFHLANIFNG LKKLDLADTL YTKVSEIWNK YLNDHYQVLS QARIQQIDLL bmy_19889T0/1-352 ---------- ---LDLADTL YTKVSEIWNK YLNNHYQVLS QARTQQIDLL BACU000377/1-366 YFHLANIFYG LKKLDLADTL YTKVSEIWNK YLNNRYQVLS QARTQQIDLL ENSTTRP00000003383/1-367 YFYLANIFYG LKKLDLADTL YTXVSEIWNE YLNNHYQVLS QARTQQVDLL 301 350 ENSBTAP00000017258/1-366 GKRFETDTGL DEAQEAEAIQ ILTSILNIRE STSNKAPQKT IFVLKILFML bmy_19889T0/1-352 GKQFETDTGL DEAQEAEAIQ ILTSILNIRE STSDKAPQKT IF-------- BACU000377/1-366 GKQFETDTGL DEAQEAEAIQ ILTSILNIRE STSDKAPQKT IFVLKILFML ENSTTRP00000003383/1-367 GKQFETDTGL DEAQEAEAIQ ILTSILKIRE STSDKAPQKT IFVLKILFML 351 400 ENSBTAP00000017258/1-366 YFLMMNSSKA KEYALRALHL AKKQKLSVQE QNTIQDLLNL ISVEEAQPIT bmy_19889T0/1-352 ---------A EEYAMRALDL AKEQQLSVHE QNTIQDLLNL ISAXEAHPIT BACU000377/1-366 YYLMMNSSKA EEYAMRALDL AKEQQLSVHE QNTIQDLLNL ISAEEAHHIE ENSTTRP00000003383/1-367 YYLMVNSSKA EEYAMRALDL AKEQQLSVHE QNTIQDLLNL ISAEEAHSIT 401 450 ENSBTAP00000017258/1-366 - bmy_19889T0/1-352 - BACU000377/1-366 - ENSTTRP00000003383/1-367 W