KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 5  Type: P  Thu May 15 17:01:01 2014  Check: 00 ..

 Name: ENSP00000332225/1-165     Len:    165  Check:  1393  Weight:  1.00
 Name: ENSBTAP00000017294/1-165  Len:    165  Check:  824  Weight:  1.00
 Name: ENSTTRP00000016327/1-165  Len:    165  Check:  1291  Weight:  1.00
 Name: bmy_08308T0/1-151         Len:    165  Check:  1371  Weight:  1.00
 Name: BACU000926/1-151          Len:    165  Check:  1294  Weight:  1.00

//


                          1                                                   50
ENSP00000332225/1-165     MAKMNLSSYI LILTFSLFSQ GILLSASKSI RNLDDDMVFN TFRLGKGFQK 
ENSBTAP00000017294/1-165  MAKMSFSSYI LILTFSLLSQ GISLSASKSI RNLDDDMVFK TLRLGKAFQK 
ENSTTRP00000016327/1-165  MAKMSFSSYI LILTFSLLSQ GVSPSASKSI RNLEDDMVFK TLRLGKAFQK 
bmy_08308T0/1-151         MAKXSFSSYI LILTFSLLSQ GVSPSASKSI RNLEDDMVFK TLRLGKAFQK 
BACU000926/1-151          MAKMSFSSYI LILTFSLLSQ GVSPSASKSI RNLEDDMVFK TLRLGKAFQK 


                          51                                                 100
ENSP00000332225/1-165     EDTAEKSVIA PSLEQYKNDE SSFMNEEENK VSKNTGSKHN FLNHGLPLNL 
ENSBTAP00000017294/1-165  EDTAEKSIVV PSLEQYKNDE SSFMNDEENK NSKNAGSKHN FLNHGLPLNL 
ENSTTRP00000016327/1-165  EDTEEKSIVV PSLEEYKNDE SNFMNDEENK NSKNAGSKHN FLNNGLPLNL 
bmy_08308T0/1-151         EDTEEKSIVV PSLEEYKNDE SNFMNDEENK NSKNAGSKHN FLNHGLPLNL 
BACU000926/1-151          EDTEEKSIVV PSLEEYKNDE SNFMNDEENK NSKNAGSKHN FLNHGLPLNL 


                          101                                                150
ENSP00000332225/1-165     AIKPYLALKG SVAFPAENGV QNTESTQEKR EIGDEENSAK FPIGRRDFDM 
ENSBTAP00000017294/1-165  AIKPYLALKG SVAFPAENEV QNTESTQEKR EIGDEENSAK FPIGRRDFDM 
ENSTTRP00000016327/1-165  AIKPYLALKG SVAFPPENEV QNTESIQEKR EIADEENSAK FPIGRRDFDM 
bmy_08308T0/1-151         AIKPYLALKG SVAFPAENEV QNTESIQEKR EIADEENSAK FPIGRRDFDS 
BACU000926/1-151          AIKPYLALKG SVAFPAENEV QNTEPIQEKR EIADEENSAK FPIGRRDFDS 


                          151                                                200
ENSP00000332225/1-165     LRCMLGRVYR PCWQV 
ENSBTAP00000017294/1-165  LRCMLGRVYR PCWQV 
ENSTTRP00000016327/1-165  LRCMLGRVYR PCWQV 
bmy_08308T0/1-151         E--------- ----- 
BACU000926/1-151          E--------- -----