KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:01:03 2014 Check: 00 .. Name: ENSTTRP00000014030/1-792 Len: 794 Check: 4751 Weight: 1.00 Name: BACU000439/1-700 Len: 794 Check: 3846 Weight: 1.00 Name: ENSBTAP00000017301/1-694 Len: 794 Check: 4500 Weight: 1.00 Name: bmy_17264T0/1-622 Len: 794 Check: 8772 Weight: 1.00 Name: ENSP00000419851/1-693 Len: 794 Check: 5129 Weight: 1.00 // 1 50 ENSTTRP00000014030/1-792 ASAVQTDLVG GAGRLTVAGQ CGSRRRGQRA RCWSALPRRW GPCSATAAPL BACU000439/1-700 ---------- ---------- MNDY------ -LLSKTMEFF FV-------- ENSBTAP00000017301/1-694 ---------- ---------- KVL------- -CS------- YL-------- bmy_17264T0/1-622 ---------- ---------- MCVYIRILRL RCYESDAYIF FP-------- ENSP00000419851/1-693 ---------- ---------- MAL------- -CNGDS---- ---------- 51 100 ENSTTRP00000014030/1-792 GASQAASSSP RLPPAPRPGL LLSPGPWRRP HRPSPAPSHL AAAAAAPAPM BACU000439/1-700 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000017301/1-694 ---------- ---------- ---------- ---------- ---------- bmy_17264T0/1-622 ---------- ---------- ---------- ---------- ---------- ENSP00000419851/1-693 ---------- ---------- ---------- ---------- ---------- 101 150 ENSTTRP00000014030/1-792 ALCNGDSKLE NAGGDLKDGH HHYEGAVVIL DAGAQYGKVI DRRVRELFVQ BACU000439/1-700 -------KLE NAGGDLKDGH HHYEGAVVIL DAGAQYGKVI DRRVRELFVQ ENSBTAP00000017301/1-694 -------QLE NAGGDLKDGH HHNEGAVVIL DAGAQYGKVI DRRVRELFVQ bmy_17264T0/1-622 -------QLE NAGGDLKDGH HHYEGAVVIL DAGAQYGKVI DRRVRELFVQ ENSP00000419851/1-693 -------KLE NAGGDLKDGH HHYEGAVVIL DAGAQYGKVI DRRVRELFVQ 151 200 ENSTTRP00000014030/1-792 SEIFPLETPA FAVKEQGFRA IIISGGPNSV YAEDAPWFDP AIFTIGKPVL BACU000439/1-700 SEIFPLETPA FAIKEQGFRA IIISGGPNSV YAEDAPWFDP AVFTIGKPVL ENSBTAP00000017301/1-694 SEIFPLETPA FAIKEQGFRA IIISGGPNSV YAEDAPWFDP AIFTIGKPVL bmy_17264T0/1-622 SEIFPLETPA FAVKEQGFRA IIISGGPNSV YAEDAPWFDP AIFTIGKPVL ENSP00000419851/1-693 SEIFPLETPA FAIKEQGFRA IIISGGPNSV YAEDAPWFDP AIFTIGKPVL 201 250 ENSTTRP00000014030/1-792 GICYGM--QM MNKVFGGTVH KKSVREDGVF SISVDNTCSL FRGLQKEEIV BACU000439/1-700 GICYGM--QM MNKVFGGTVH KKSVREDGVF SISVDNTCSL FRGLQKEEIV ENSBTAP00000017301/1-694 GICYGMQEQM MNKVFGGTVH KKSVREDGVF SISVDNTCSL FRGLQKEEIV bmy_17264T0/1-622 GICYGM--QM MNKVFG---- ---------- ---------- ---------- ENSP00000419851/1-693 GICYGM--QM MNKVFGGTVH KKSVREDGVF NISVDNTCSL FRGLQKEEVV 251 300 ENSTTRP00000014030/1-792 LLTHGDSVDK VADGFKVVAR SGNIVAGIAN ESKKLYGAQF HPEVGLTENG BACU000439/1-700 LLTHGDSVDK VADVFKVVAR SGNVVAGIAN ESKKLYGVQF HPEVGLTENG ENSBTAP00000017301/1-694 LLTHGDSVDK VADGFKVVAR SGNIVAGIAN ESKKLYGAQF HPEVGLTENG bmy_17264T0/1-622 ---------- ---------- ------GIAN ESKKLYGVQF HPEVGLTENG ENSP00000419851/1-693 LLTHGDSVDK VADGFKVVAR SGNIVAGIAN ESKKLYGAQF HPEVGLTENG 301 350 ENSTTRP00000014030/1-792 KVILKNFLFX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX BACU000439/1-700 KVIQKNFLFD IAGCSGTFTV QNRELECIRE IKERVSTSKV LVLLSGGVDS ENSBTAP00000017301/1-694 KVILKNFLYD IAGCSGTFTV QNREIECIRE IKEGVGTSKV LVLLSGGVDS bmy_17264T0/1-622 KVILKNFLFD IAGCSGTFTV QNRELECIRE IKERVGTSKV LVLLSGGVDS ENSP00000419851/1-693 KVILKNFLYD IAGCSGTFTV QNRELECIRE IKERVGTSKV LVLLSGGVDS 351 400 ENSTTRP00000014030/1-792 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXINA BACU000439/1-700 TVCTALLNRA LNQEQVIAVH IDNGFMRKRE SQSVEEALKK LGIQVKVINA ENSBTAP00000017301/1-694 TVCTALLNRA LNQDQVIAVH IDNGFMRKRE SQSVEEALRK LGIQVKVINA bmy_17264T0/1-622 TVCTALLNRA LNQEQVIAVH IDNGFMRKRE SQSVEEALKK LGIQVKVINA ENSP00000419851/1-693 TVCTALLNRA LNQEQVIAVH IDNGFMRKRE SQSVEEALKK LGIQVKVINA 401 450 ENSTTRP00000014030/1-792 AHSFYNGTTT LPISDEDRTP RKRISKTLNM TTSPEEKRKI IGDTFVKIAN BACU000439/1-700 AHSFYNGTTT LPISDEDRTP RKRISKTLNM TTSPEEKRKI IGDTFVKIAN ENSBTAP00000017301/1-694 AHSFYNGTTT LPISDEDRTP RKRISKTLNM TTSPEEKRKI IGDTFVKIAN bmy_17264T0/1-622 AHSFYNGTTT LPISDEDRTP RKRISKTLNM TTSPEEKRKI IGDTFVKIAN ENSP00000419851/1-693 AHSFYNGTTT LPISDEDRTP RKRISKTLNM TTSPEEKRKI IGDTFVKIAN 451 500 ENSTTRP00000014030/1-792 EVIGEMNLKP EEVFLAQGTL RPDLIESASL VASGKAELIK THHNDTELIR BACU000439/1-700 EVIGEMNLKP EEVFLAQGTL RPDLIESASL VASGKAELIK THHNDTELIR ENSBTAP00000017301/1-694 EVIGEMNLKP EEVFLAQGTL RPDLIESASL VASGKAELIK THHNDTELIR bmy_17264T0/1-622 EVIGEMNLKP EEVFLAQGTL RPDLIESASL ---------- ---------- ENSP00000419851/1-693 EVIGEMNLKP EEVFLAQGTL RPDLIESASL VASGKAELIK THHNDTELIR 501 550 ENSTTRP00000014030/1-792 KLREEGKVIE PLKDFHKDEV RTLGRELGLP EELVSRHPFP XXXXXXXXXX BACU000439/1-700 KLREEGKVIE PLKDFHKDEV RILGRELGLP EELVSRHPFP GPGLAIRVIC ENSBTAP00000017301/1-694 KLREEGKVIE PLKDFHKDEV RILGRELGLP EELVSRHPFP GPGLAIRVIC bmy_17264T0/1-622 -----GKVIE PLKDFHKDEV RILGRELGLP EELVSRHPFP GPGLAIRVIC ENSP00000419851/1-693 KLREEGKVIE PLKDFHKDEV RILGRELGLP EELVSRHPFP GPGLAIRVIC 551 600 ENSTTRP00000014030/1-792 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXP HTLLQRVKAC TTEEDQEKLM BACU000439/1-700 AEEPYICKDF PETNNILKIV ADFSASVKKP HTLLQRVKAC TTEEDQEKLM ENSBTAP00000017301/1-694 AEEPYICKDF PETNNILKIV ADFSASVKKP HTLLQRVKAC TTEEDQEKLM bmy_17264T0/1-622 AEEPYICKDF PETNNILKIV ADFSASVKKP HTLLQRVKAC TTEEDQEKLM ENSP00000419851/1-693 AEEPYICKDF PETNNILKIV ADFSASVKKP HTLLQRVKAC TTEEDQEKLM 601 650 ENSTTRP00000014030/1-792 QITSLHSLNA FLLPIKTVGV QGDCRSYSYV CGISSKDEPD WESLIFLARL BACU000439/1-700 QITSLHSLNA FLLPIKTVGV QGDCRSYSYV CGISSKDEPT WESLIFLARL ENSBTAP00000017301/1-694 QITSLHSLNA FLLPIKTVGV QGDCRSYSYV CGISSKDEPD WESLIFLARL bmy_17264T0/1-622 QITSLHSLNA FLLPIKTVGV QGDCRSYSYV CGISSKDEPD WESLIFLARL ENSP00000419851/1-693 QITSLHSLNA FLLPIKTVGV QGDCRSYSYV CGISSKDEPD WESLIFLARL 651 700 ENSTTRP00000014030/1-792 IPRMCHNINR FVYIFGSPVK EPPTDVTPTF LTTGVLSTLR QADFEAHNIL BACU000439/1-700 IPRMCHNINR VVYIFGPPVK EPPTDVTPTF LTTGVLRTLR QADFEAHNIL ENSBTAP00000017301/1-694 IPRMCHNINR VVYIFGPPVK EPPTDVTPTF LTTGVLSTLR QADFEAHNIL bmy_17264T0/1-622 IPRMCHNINR VVYIFGPPVK EPPTDVTPTF LTTGVLSTLR QADFEAHNIL ENSP00000419851/1-693 IPRMCHNVNR VVYIFGPPVK EPPTDVTPTF LTTGVLSTLR QADFEAHNIL 701 750 ENSTTRP00000014030/1-792 RESGYAGKIS QMPVILTPLH FDRDPLQKQP SCQRSVVIRT FITSDFMTGI BACU000439/1-700 RESGYAGKIS QMPVILTPLH FDRDPLQKQP SCQRSVVIRT FITSDFMTGI ENSBTAP00000017301/1-694 RESGYAGKIS QMPVILTPLH FDRDPLQKQP SCQRSVVIRT FITSDFMTGI bmy_17264T0/1-622 RESGYAGKIS QMPVILTPLH FDRDPLQKQP SCQRSVVIRT FITSDFMTGI ENSP00000419851/1-693 RESGYAGKIS QMPVILTPLH FDRDPLQKQP SCQRSVVIRT FITSDFMTGI 751 800 ENSTTRP00000014030/1-792 PATPGNEIPV EVVLKMVTEI KKIPGISRIM YDLTSKPPGT TEWE BACU000439/1-700 PATPGNEIPV EVVLKMVTEI KKIPGISRIM YDLTSKPPGT TEWE ENSBTAP00000017301/1-694 PATPGNEIPV EVVLKMVTEI KKIPGISRIM YDLTSKPPGT TEWE bmy_17264T0/1-622 PATPGNEIPV EVVLKMVTEI KKIPGISRIM YDLTSKPPGT TEWE ENSP00000419851/1-693 PATPGNEIPV EVVLKMVTEI KKIPGISRIM YDLTSKPPGT TEWE