KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:01:04 2014 Check: 00 .. Name: ENSP00000309836/1-715 Len: 715 Check: 7890 Weight: 1.00 Name: ENSBTAP00000017304/1-714 Len: 715 Check: 7009 Weight: 1.00 Name: ENSTTRP00000009244/1-715 Len: 715 Check: 7188 Weight: 1.00 Name: bmy_03307T0/1-640 Len: 715 Check: 5561 Weight: 1.00 Name: BACU015666/1-715 Len: 715 Check: 9032 Weight: 1.00 // 1 50 ENSP00000309836/1-715 MAADESSQNT LRLQFKAMQE MQHKRLQKQM EKKREKELSL KSRADDQEEP ENSBTAP00000017304/1-714 MAEDEGSQDT LRLQFRAMQE MQHKRLQKQM EKRKEKELSL QSRGDDQKEP ENSTTRP00000009244/1-715 MAEDEGSQDT LRLQFRAMQE MQHRRLQKQM EKRKEKELSF QSRADDQKEH bmy_03307T0/1-640 ---------- -------MQE MQHRRLQKQM EKRKEKELSL QSRVDDQKEP BACU015666/1-715 MAEDEGSQDT LRLQFRAMQE MQHRRLQKQM EKRKEKELSL QSRVDDQKEP 51 100 ENSP00000309836/1-715 LEVSDGLSLL HAGEPNSKNS FEKRVLEDEI EHLRNELRET VDENGRLYKL ENSBTAP00000017304/1-714 LEISDGLSVL QAGEQNSKTS FQQRVLEDEI EQLRDQLRET VDENGRLYKL ENSTTRP00000009244/1-715 VEISDGLSVL QAGEQNSKTS FEQRMLEDEI ERLRDQLRET VDENGRLYKL bmy_03307T0/1-640 LEISDGLSVL QAGEQNSKTS FEQRMLEDEI ERLRDQLRET VDENGRLYKL BACU015666/1-715 LEISDGLSVL QAGEQNSKTS FEQRMLEDEI ERLRDQIRET VDENGRLYKL 101 150 ENSP00000309836/1-715 LKERDFEIKH LKKKIEEDRF AFTGTAGVAG DVVATKIVEL SKKNRLLMAE ENSBTAP00000017304/1-714 LKERDFEIKH LKKKIEEDRF AFTGTAGVAG DVIATKIVEL SKKNRVLMAE ENSTTRP00000009244/1-715 LKERDFEIKH LKKKIEEDRF AFTGTAGVVG DVTATKIVEL SKKNRVLMAE bmy_03307T0/1-640 LKERDFEIKH LKKKIEEDRF AFTGTAGVAG DVTATKIVEL SKKNRVLMAE BACU015666/1-715 LKERDFEIKH LKKKIEEDRF AFTGTAGVAG DVTATKIVEL SKKNRVLMAE 151 200 ENSP00000309836/1-715 SEGAKTRVKQ LTNRIQELER ELQTALTRLS AKGATDAGAK PPRAQMGDRA ENSBTAP00000017304/1-714 SEGAKTRVRQ LSNRIQELEQ ELQIAQARLP AKGSTDAGAK PPRTQMGDRV ENSTTRP00000009244/1-715 SEGAKTRARQ LSNRIRELEQ ELQMALARLP AKGATDAGAK LPKAQMGDRA bmy_03307T0/1-640 SEGAKTRARQ LSNRIQELER E--------- ---------- ---------- BACU015666/1-715 SEGAKTRVRQ LNNRIQELEQ ELQMALARLP AKGATDAGAK LPKAQMGDRA 201 250 ENSP00000309836/1-715 LLETPEVKAL QDRLVATNLK MSDLRNQIQS VKQELRMAQK VLAREVGEDI ENSBTAP00000017304/1-714 LPENPEVKVL QDRLAATNLK MSDLRNQIQA VKQELRMAQK VLTSEVGEDV ENSTTRP00000009244/1-715 LQDSPEVKVL QDRLAATNLK MSDLRNQIRA VKQELRVAQK VLTNEIGEDV bmy_03307T0/1-640 -QDSPEVKVL QDRLAATNLK MSDLRNQIQA VKQELRMAQK VLTSEVGEDV BACU015666/1-715 LQDSPEVKVL QDRLAATNLK MSDLRNQIQA VKQELRMAQK VLTSEVGEDV 251 300 ENSP00000309836/1-715 NVQQLLSSPG TWRGRAQQIL VLQSKVQELE KQLGQARSQS AGTASDELSV ENSBTAP00000017304/1-714 NIQQLLSSPG TWRGRAQQIL VLQSKVRELE KQLGQTRSRS EETAS-ELSV ENSTTRP00000009244/1-715 NIQQLLSSPG TWRGRAQQIL VLQSKVRELE KQLGQTRSRS VETASDELSV bmy_03307T0/1-640 NIQQLLSSPG TWRGRAQQIL VLQSKIRELE KQLGQTRSRS VETASDELSV BACU015666/1-715 NIQQLLSSPG TWRGRAQQIL VLQSKVRELE KQLGQTRSRS VETASDDLSV 301 350 ENSP00000309836/1-715 YPDPRKLSAQ EKNLLRIRSL EREKQEGLEK LASERDVLQR ELEELKKKFE ENSBTAP00000017304/1-714 YPDSRKLSAQ EKNLLRIRNL EREKQEGWEK LSAERDALQR ELEELKKKFE ENSTTRP00000009244/1-715 YPDPRKLSAQ EKNLRRIHNL EREKQESWEK LAAERDALQR ELEELKKKFE bmy_03307T0/1-640 YPDPRKLSAQ EKNLLRIRNL EREKQESWEK LAAERDALQR ELEELKKKFE BACU015666/1-715 YPDPRKLSAQ EKNLLRIRNL EREKQESWEK LAAERDALQR ELEELRKKFE 351 400 ENSP00000309836/1-715 GMRSRNKLLS SEMKTLKSQM GTLVEKGRHD DELIDALMDQ LKQLQEILGS ENSBTAP00000017304/1-714 GMRSRNKVLS SEVKTLRSQM GTLVEKGRHD DELIDALMDQ LKQLQEILGS ENSTTRP00000009244/1-715 GVRSRNKVLS SEVKTLRSQM GTLVEKGRHD DELIDALMDQ LKQLQEILGS bmy_03307T0/1-640 GVRSRNKVLS SEVKTLRSQM GTLVEKGRHD DELIDALMDQ LKQLQEILGS BACU015666/1-715 GVRSRNKVLS SEVKTLRSQM GTLVEKGRHD DELIDALMDQ LKQLQEILGS 401 450 ENSP00000309836/1-715 LSLQEEKTRV SQHHLDQQLN SEAQRSNSLV AQLQAMVAER EAKVRQLEME ENSBTAP00000017304/1-714 LSLQEEKTRV SQHRLDQQLN SEAQRSSSLV AQLRAMVAER EAKVQQLELE ENSTTRP00000009244/1-715 LSLQEEKTRA SKHHLHQQLN NEAQQSSSLV AQLRATVAER EAKVRQLEVE bmy_03307T0/1-640 LSLQEEKTRV SQHHLDQQLN NEAQQSSSLV AQLRATVAER EAKVRQLEVE BACU015666/1-715 LSLQEEKTRV SRHHLDQQLN NEAQQSSSLV AQLRATVAER EAKVRQLEVE 451 500 ENSP00000309836/1-715 IGQLNVHYLR NKGVGEGSSG REVSPAYTQF LEDPGLTKSP ASAGDHVGRL ENSBTAP00000017304/1-714 IGQLSVQYLR NKGVDEGSSG PEVSRASTKL PEDPGLTKPP ASAGDHAGRL ENSTTRP00000009244/1-715 IGQLSMQYLR NKGVGEGSSG PEVNPASAKF PEDPGLTNSP ASAGDHAGRL bmy_03307T0/1-640 IGQLSMQYLR NKGVGEGSSG PEVNPASTKF PEDPGLTKSP ASAGDHAGRL BACU015666/1-715 IGQLSMQYLR NKGVGEGSSG PEVNPASAKF PEDPGLTKSP ASAGDHAGRL 501 550 ENSP00000309836/1-715 GSSRSVTSLG HTLVESALTR PSLPSPHRTS PRFSDSPEQK GWQAQVSEIK ENSBTAP00000017304/1-714 GSSRSVTSLG HTLVESSLTW PSLPSPHGAS PRFLDSPEQK GWQTQVTEFK ENSTTRP00000009244/1-715 GSSRSVTSLG HTLVESALTW PSLHSPHGPS PRFSDSPEQK AWQTQVTEFK bmy_03307T0/1-640 GSS------- ---------- ---------- -RFSDSPEQK AWQTQVTEFK BACU015666/1-715 GSSRSVTSLG HTLVESALTW PSLHGPHGPS PRFSDSPEQK AWQTQVTEFK 551 600 ENSP00000309836/1-715 ALWQAAEVER DRLTEFVTVL QKRVEESNSK LLESERKLQE ERHRTVVLEQ ENSBTAP00000017304/1-714 ALWQAAEVER DRLTEFVTVL QKRVEERNSK LLESERRLQE ERHRAVVLEQ ENSTTRP00000009244/1-715 ALWQAAEVER DRLTEFVTVL QKRVEESNSK LLESERKLQE ERHRTAVLEQ bmy_03307T0/1-640 ALWQAAEVER DRLTEFVTVL QKRVEESNSK LLESERKLQE ERHRTVVLEQ BACU015666/1-715 ALWQAAEVER DRLTEFVTVL QKRVEESNSK LLESERKLQQ ERHRTVVLEQ 601 650 ENSP00000309836/1-715 HLEKIRLEPG KASASQRAAP RTKTGLPTSN NRHNPTGSEK KDPSFAQLSD ENSBTAP00000017304/1-714 HLEKMRLEPG RMSASQRAAP RSKTGLPASN TRHHPSESER KDPSSAQLSS ENSTTRP00000009244/1-715 HLEKMRLEPG RTSASQRAAP RSKTGVPTSN TRHNPKESER KDPSSAQISN bmy_03307T0/1-640 HLEKMRLQPG RMSASQRAAP RSKTGVPTSN TRHNPKESER KDPSSAQISS BACU015666/1-715 HLEKMRLEPG RTSASQRAAP RSKTGVPTSN TRHNPKESER KDPSSAQISN 651 700 ENSP00000309836/1-715 VPVESQMEEL TTRLAIQVEE NEMLKAALGS ALRGKEEDFR MYHEILGQVK ENSBTAP00000017304/1-714 VPMESQMEEL TTRLAIQVEE NEMLKAALGN ALQGKEEDFR MYHETLDQVK ENSTTRP00000009244/1-715 VPVESQMEEL ITRLAIQVEE NEMLKAALSS ALRGKEEDFR MYHETLGQVK bmy_03307T0/1-640 VPVESQMEEL TTRLAIQVEE NEMLKAALGS ALQGKEEDFR TYHETLGQVK BACU015666/1-715 VPVESQMEEL TTRLAIQLEE NEMLKAALGS ALQGKEEDFR MYQETLGQVK 701 750 ENSP00000309836/1-715 SVFLQALRQQ KTGKQ ENSBTAP00000017304/1-714 GVFLQALRQQ KADKH ENSTTRP00000009244/1-715 GVFLQALRQQ KADKR bmy_03307T0/1-640 GVFLQALRQQ KADKH BACU015666/1-715 GVFLQALRQQ KADKR