KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:01:05 2014 Check: 00 .. Name: ENSTTRP00000001380/1-888 Len: 1003 Check: 7132 Weight: 1.00 Name: BACU002736/1-826 Len: 1003 Check: 3400 Weight: 1.00 Name: bmy_11912T0/1-1003 Len: 1003 Check: 5838 Weight: 1.00 Name: ENSP00000256578/1-879 Len: 1003 Check: 8840 Weight: 1.00 Name: ENSBTAP00000017306/1-799 Len: 1003 Check: 7574 Weight: 1.00 // 1 50 ENSTTRP00000001380/1-888 ---------- ---------- ----IRNHGQ GLFRLRGLCF LHQSLPLGAG BACU002736/1-826 ---------- ---------- ---------- ---------- ---------- bmy_11912T0/1-1003 MAGAGPGRLG GGGPEQGRGH GPSGVWGCGE ARRRWRGFGG VAPVAPATRV ENSP00000256578/1-879 ---------- ---------- ----MRNRGQ GLFRLRSRCF LHQSLPLGAG ENSBTAP00000017306/1-799 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000001380/1-888 QRKGLDVAEP -PSWCGSDSA --VSAAGAMA SYSSG----- ---------- BACU002736/1-826 ---------- ---------- --------MA SYSSG----- ---------- bmy_11912T0/1-1003 RPEYPESVER SPDELRVPLS GEHVACPPLE CGAGGRDAGV YKASAAAQCQ ENSP00000256578/1-879 RRKGLDVAEP GPSRCRSDSP AVAAVVPAMA SYPSG----- ---------- ENSBTAP00000017306/1-799 ---------- ---------- ---------- ---------- ---------- 101 150 ENSTTRP00000001380/1-888 --------PG KSKAKYPFKK RASLQA---- ---------- -SSAVPEARG BACU002736/1-826 --------PG KSKAKYPFKK RASLQA---- ---------- -SSAVPEARG bmy_11912T0/1-1003 GRGPWSDLPG SGSQPFSRPS RPGFPALQTL ESRLPGTPQG SGSMASEARG ENSP00000256578/1-879 --------SG KPKAKYPFKK RASLQA---- ---------- -STAAPEARG ENSBTAP00000017306/1-799 ---------- ---------- ---------- ---------- ---MASEARG 151 200 ENSTTRP00000001380/1-888 GLGAPPLQSA RSLPGPAPCL KHFPLDLRTS MDGKCKEIAE ELFSRSLAES BACU002736/1-826 GLGAPPLQSA RSLPGPAPCL KHFPLDLRTS MDGKCKEIAE ELFSRSLAES bmy_11912T0/1-1003 GLGAPPLQSA RSLPGPAPCL KHFPLDLRTS MDGKCKEIAE ELFSRSLAES ENSP00000256578/1-879 GLGAPPLQSA RSLPGPAPCL KHFPLDLRTS MDGKCKEIAE ELFTRSLAES ENSBTAP00000017306/1-799 GLGAPPLQSA RSLPGPAPCL KHFPLDLRTS MDGKCKEIAE ELFSRSLAES 201 250 ENSTTRP00000001380/1-888 ELRSAPYEFP EESPIEQLEE RRQRLERQIS QDVKLEPDIL LRAKQDFLKT BACU002736/1-826 ELRSAPYEFP EESPIEQLEE RRQRLERQIS QDVKLEPDIL LRAKQDFLKT bmy_11912T0/1-1003 ELRSAPYEFP EESPIEQLEE RRQRLERQIS QDVKLEPDIL LRAKQDFLKT ENSP00000256578/1-879 ELRSAPYEFP EESPIEQLEE RRQRLERQIS QDVKLEPDIL LRAKQDFLKT ENSBTAP00000017306/1-799 ELRSAPYEFP EESPIEQLEE RRQRLERQIS QDVKLEPDIL LRAKQDFLKT 251 300 ENSTTRP00000001380/1-888 DSDSDLQLYK EQRDGQGDRG LWERDVVLER EFQRVTISGE EKCGVPFTDL BACU002736/1-826 DSDLDLQLYK EQREGQGDRG LWERDVVLER EFQRVTISGE EKCGVPFTDL bmy_11912T0/1-1003 DSDLDLQLYK EQREGQGDRG LWERDVVLER EFQRVTISGE EKCGVPFTDL ENSP00000256578/1-879 DSDSDLQLYK EQGEGQGDRS LRERD-VLER EFQRVTISGE EKCGVPFTDL ENSBTAP00000017306/1-799 DSDSDFQLYK EKGEGQGDRG LWERDAVLER EFQRVTISGE EKCGVPFTDL 301 350 ENSTTRP00000001380/1-888 LDAAKSVVRA LFIREKYMAL SLQSFCPTTR RYLQQLAEKP LETRTYEQGP BACU002736/1-826 LDAAKSVVRA LFIREKYMAL SLQSFCPTTP RYLQQLAEKP LETRTYEQGP bmy_11912T0/1-1003 LDAAKSVVRA LFIREKYMAL SLQSFCPTTR RYLQQLAEKP LETRTYEQGP ENSP00000256578/1-879 LDAAKSVVRA LFIREKYMAL SLQSFCPTTR RYLQQLAEKP LETRTYEQGP ENSBTAP00000017306/1-799 LDAAKSVVRA LFIREKYMAL SLQSFCPTTR RYLQQLAEKP LETRTYEQGP 351 400 ENSTTRP00000001380/1-888 DTPVSADAPV HPPALEQHPY EHCEPSTMPG DLGLGLRMVQ GVVHVYTRRE BACU002736/1-826 DTPVSADAPV HPPALEQHPY EHCEPSTMPG DLGLGLRVVQ GVVHVYTRRE bmy_11912T0/1-1003 DTPVSADAPV HPPALEQHPY EHCEPSTMPG DLGLGLRVVQ GVVHVYTRRE ENSP00000256578/1-879 DTPVSADAPV HPPALEQHPY EHCEPSTMPG DLGLGLRMVR GVVHVYTRRE ENSBTAP00000017306/1-799 DTPVSADAPV HPPVLEQHPY ERCEPSTMPA DLGLGLRMVR GVVHVYTRRE 401 450 ENSTTRP00000001380/1-888 PDEHCSEVEL PYPDLQEFVA DVNVLMALII NGPIKSFCYR RLQYLSSKFQ BACU002736/1-826 PDEHCSEVEL PYPDLQEFVA DVNVLMALII NGPIKSFCYR RLQYLSSKFQ bmy_11912T0/1-1003 PDEHCSEVEL PYPDLQEFVA DVNVLMALII NGPIKSFCYR RLQYLSSKFQ ENSP00000256578/1-879 PDEHCSEVEL PYPDLQEFVA DVNVLMALII NGPIKSFCYR RLQYLSSKFQ ENSBTAP00000017306/1-799 PDEHCSEVEL PYPDLQEFVA DVNVLMALII NGPIKSFCYR RLQYLSSKFQ 451 500 ENSTTRP00000001380/1-888 MHVLLNEMKE LAAQKKVPHR DFYNIRKVDT HIHASSCMNQ KHLLRFIKRA BACU002736/1-826 MHVLLNEMKE LAAQKKVPHR DFYNIRKVDT HIHASSCMNQ KHLLRFIKRA bmy_11912T0/1-1003 MHVLLNEMKE LAAQKKVPHR DFYNIRKVDT HIHASSCMNQ KHLLRFIKRA ENSP00000256578/1-879 MHVLLNEMKE LAAQKKVPHR DFYNIRKVDT HIHASSCMNQ KHLLRFIKRA ENSBTAP00000017306/1-799 MHVLLNEMKE LAAQKKVPHR DFYNIRKVDT HIHASSCMNQ KHLLRFIKRA 501 550 ENSTTRP00000001380/1-888 MKRHLEEIVH MEQGREQTLR EVFESMNLTA YDLSVDTLDV HADRNTFHRF BACU002736/1-826 MKRHLEEIVH VEQGREQTLR EVFESMNLTA YDLSVDTLDV HADRNTFHRF bmy_11912T0/1-1003 MKRHLEEIVH VEQGREQTLR EVFESMNLTA YDLSVDTLDV HADRNTFHRF ENSP00000256578/1-879 MKRHLEEIVH VEQGREQTLR EVFESMNLTA YDLSVDTLDV HADRNTFHRF ENSBTAP00000017306/1-799 MKRHLEEIVH VEQGREQTLR EVFESMNLTA YDLSVDTLDV HADRNTFHRF 551 600 ENSTTRP00000001380/1-888 DKFNAKYNPI GESVLREIFI KTDNRVSGKY FAHIIKEVMS DLEESKYQNA BACU002736/1-826 DKFNAKYNPI GESVLREIFI KTDNRVSGKY FAHIIKEVMS DLEESKYQNA bmy_11912T0/1-1003 DKFNAKYNPI GESVLREIFI KTDNRVSGKY FAHIIKEVMS DLEESKYQNA ENSP00000256578/1-879 DKFNAKYNPI GESVLREIFI KTDNRVSGKY FAHIIKEVMS DLEESKYQNA ENSBTAP00000017306/1-799 DKFNAKYNPI GESVLREIFI KTDNRVSGKY FAHIIKEVMS DLEESKYQNA 601 650 ENSTTRP00000001380/1-888 ELRLSIYGRS RDEWDKLAHW AVIHRVHSPN VRWLVQVPRL FDVYRTKGQL BACU002736/1-826 ELRLSIYGRS RDEWDKLARW AVMHRVHSPN VRWLVQVPRL FDVYRTKGQL bmy_11912T0/1-1003 ELRLSIYGRS RDEWDKLARW AVMHRVHSPN VRWLVQVPRL FDVYRTKGQL ENSP00000256578/1-879 ELRLSIYGRS RDEWDKLARW AVMHRVHSPN VRWLVQVPRL FDVYRTKGQL ENSBTAP00000017306/1-799 ELRLSIYGRS RDEWDKLARW AVTHRVHSPN VRWLVQVPRL FDVYRTKGQL 651 700 ENSTTRP00000001380/1-888 ANFQEMLENI FLPLFEATIH PASHPELXXX XXXXXXXXXX XXXXXXXXXX BACU002736/1-826 ANFQEMLENI FLPLFEATIH PASHPELHLF LEHVDGFDSV DDESKPENHI bmy_11912T0/1-1003 ANFQEMLENI FLPLFEATIH PASHPELHLF LEHVDGFDSV DDESKPENHV ENSP00000256578/1-879 ANFQEMLENI FLPLFEATVH PASHPELHLF LEHVDGFDSV DDESKPENHV ENSBTAP00000017306/1-799 ANFQEMLENI FLPLFEATIH PASHPELHLF LEHVDGFDSV DDESKPENHV 701 750 ENSTTRP00000001380/1-888 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX BACU002736/1-826 FNLESPLPEA WVEEDNPPYA YYLYYTFVNM AMLNHLRRQR GFHTFVLRPH bmy_11912T0/1-1003 FNLESPLPEA WVEEDNPPYA YYLYYTFVNM AMLNHLRRQR GFHTFVLRPH ENSP00000256578/1-879 FNLESPLPEA WVEEDNPPYA YYLYYTFANM AMLNHLRRQR GFHTFVLRPH ENSBTAP00000017306/1-799 FNLESPLPEA WVEEDNPPYA YYLYYTFANM AMLNHLRRQR GFHTFVLRPH 751 800 ENSTTRP00000001380/1-888 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX BACU002736/1-826 CGEAGPIHHL VSAFMLAENI SHGLLLRKAP VLQYLYYLAQ IGIAMSPLSN bmy_11912T0/1-1003 CGEAGPIHHL VSAFMLAENI SHGLLLRKAP VLQYLYYLAQ IGIAMSPLSN ENSP00000256578/1-879 CGEAGPIHHL VSAFMLAENI SHGLLLRKAP VLQYLYYLAQ IGIAMSPLSN ENSBTAP00000017306/1-799 CGEAGPIHHL VSAFMLAENI SHGLLLRKAP VLQYLYYLAQ VGIAMSPLSN 801 850 ENSTTRP00000001380/1-888 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXX---- ---------- BACU002736/1-826 NSLFLSYHRN PLPEYLSRGL MVSLSTDDPL QFHFTK---- ---------- bmy_11912T0/1-1003 NSLFLSYHRN PLPEYLSRGL MVSLSTDDPL QFHFTKVSTR RAAWLAGVLG ENSP00000256578/1-879 NSLFLSYHRN PLPEYLSRGL MVSLSTDDPL QFHFTK---- ---------- ENSBTAP00000017306/1-799 NSLFLSYHRN PLPEYLSRGL MVSLSTDDPL QFHFTK---- ---------- 851 900 ENSTTRP00000001380/1-888 ---------- ---------- ---------- ------XXXX XXXXXXXEPL BACU002736/1-826 ---------- ---------- ---------- ---------- -------EPL bmy_11912T0/1-1003 HEGHPARAGL GAGAALCWWS TACLVASPWE GRVAGPVHPP EGTWLVQEPL ENSP00000256578/1-879 ---------- ---------- ---------- ---------- -------EPL ENSBTAP00000017306/1-799 ---------- ---------- ---------- ---------- -------EPL 901 950 ENSTTRP00000001380/1-888 MEEYSIATQV WKLSSCDMCE LARNSVLMSG FSHKVKSHWL GPNYTKEGPE BACU002736/1-826 MEEYSIATQV WKLSSCDMCE LARNSVLMSG FSHKVKSHWL GPNYTKEGPE bmy_11912T0/1-1003 MEEYSIATQV WKLSSCDMCE LARNSVLMSG FSHKVKSHWL GPNYTKEGPE ENSP00000256578/1-879 MEEYSIATQV WKLSSCDMCE LARNSVLMSG FSHKVKSHWL GPNYTKEGPE ENSBTAP00000017306/1-799 MEEYSIATQV WKLSSCDMCE LARNSVLMSG FSHKVKSHWL GPSYTKEGPE 951 1000 ENSTTRP00000001380/1-888 GNDIRRTNVP DIRVGYRHET LCQELALITQ AVQSEMLETI PEEAGITMSP BACU002736/1-826 GNDIRRTNVP DIRVGYRHET LCQELALITQ AVQSEMLETI PEEAGITMSP bmy_11912T0/1-1003 GNDIRRTNVP DIRVGYRHET LCQELALITQ AVQSEMLETI PEEAGITMSP ENSP00000256578/1-879 GNDIRRTNVP DIRVGYRYET LCQELALITQ AVQSEMLETI PEEAGITMSP ENSBTAP00000017306/1-799 GNDIRRTNVP DIRVGYRHET LCQELALITQ AVQSEMLETI PEEGGITMSP 1001 1050 ENSTTRP00000001380/1-888 GPQ BACU002736/1-826 GPQ bmy_11912T0/1-1003 GPQ ENSP00000256578/1-879 GPQ ENSBTAP00000017306/1-799 GPQ