KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:01:11 2014 Check: 00 .. Name: ENSP00000399588/1-587 Len: 661 Check: 3592 Weight: 1.00 Name: ENSBTAP00000017338/1-585 Len: 661 Check: 1667 Weight: 1.00 Name: bmy_17922T0/1-458 Len: 661 Check: 2101 Weight: 1.00 Name: BACU010883/1-483 Len: 661 Check: 9734 Weight: 1.00 Name: ENSTTRP00000007638/1-587 Len: 661 Check: 3179 Weight: 1.00 // 1 50 ENSP00000399588/1-587 ---------- -----MSAGD ---------- ---------- ---------- ENSBTAP00000017338/1-585 ---------- -----MSAGD ---------- ---------- ---------- bmy_17922T0/1-458 MSTNTLPQGY RMLQVFVAGD DTGGLAEKAD GKQIFLWSEL EEPSGPIGVH BACU010883/1-483 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007638/1-587 ---------- -----MSAGD ---------- ---------- ---------- 51 100 ENSP00000399588/1-587 ---------- -AVCTGWLVK ---------- -----SPPER KLQRYAWRKR ENSBTAP00000017338/1-585 ---------- -TVCMGWLVK ---------- -----SPPER KLQRYAWRRR bmy_17922T0/1-458 RLEEAARVLS SNAAAGWASR LTVTAGGVLV RPAESEKPCP LASPQAWRRR BACU010883/1-483 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007638/1-587 ---------- -AVCTGWLVK ---------- -----SPPER KLQRYAWRRR 101 150 ENSP00000399588/1-587 WFVLRRGRMS GNPDVLEYYR NKHSSKPIRV IDLSECAVWK HVGPSFVRKE ENSBTAP00000017338/1-585 WFVLRRGRLS GDRDVLEYYR SQRASKPIRT IDLSECAVWK HAGPGFVRKE bmy_17922T0/1-458 WFVLRRGRLS GDRDVLEYYR SQRARKPIRA IDLSECAVWK HAGPGFVRKE BACU010883/1-483 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007638/1-587 WFVLRRGRLS GDRDVLEYYR SQRARKPIRT IDLSECAVWK HAGPGFVRKE 151 200 ENSP00000399588/1-587 FQNNFVFIVK TTSRTFYLVA KTEQEMQVWV HSISQVCNLG HLEDGAADSM ENSBTAP00000017338/1-585 FQNHFVFIVK TTSRTFYLVA KTEEEMQVWV HSISQVCNLG HLED-RGDSM bmy_17922T0/1-458 FQNHFVFVVK TASRTFYLVA KTEEEMQVWV HSISQVCNLG HLDD-SADSV BACU010883/1-483 ---------- ---------- -----MQVWV HSISQVCNLG HLDD-IADSV ENSTTRP00000007638/1-587 FQNHFVFIVK TASRTFYLVA KTEEEMQVWV HSISQVCNLG HLDD-SADCV 201 250 ENSP00000399588/1-587 ESLSYTPSSL QPSSASSLLT AHAASSSLPR DDPNTNAVAT EETRSESELL ENSBTAP00000017338/1-585 ESGCCAPSSA QPSPSSSLLT NSAV-CSLPR DDLSTSTVAT EETRSESELF bmy_17922T0/1-458 ESGSRAPFCV QPSAASSLHT APAV-SSLPR DDPSTSTVAT EKTGSESGFL BACU010883/1-483 ESGSRAPFCV QPSAASSLHT APAV-SSLPR DDPSTSTVAT EKTGSESGFL ENSTTRP00000007638/1-587 ESGSRAPSCV QPSAASSLCT APAV-SSLPR DDPSASTVAT EETGSESEFL 251 300 ENSP00000399588/1-587 FLPDYLVLSN CETGRLHHTS LPTRCDSWSN SDRSLEQASF DDVFVDCLQP ENSBTAP00000017338/1-585 LLPDYLILSN CETGRLHHAS LPTRCDSWSN SERSLEQASF DDVFVDCPQP bmy_17922T0/1-458 FLPDYLILSN CETGRLHHAS LPTRCDSWSN SERSLEQVSF DDVFVDGPQP BACU010883/1-483 FLPDYLILSN CETGRLHHAS VPTRCDSWSN SERSLEQASF DDVFVDGPQP ENSTTRP00000007638/1-587 FLPDYLILSN CETGRLHHAS LPTRCDSWSN SERSLEQGSF DDVFVDGPQP 301 350 ENSP00000399588/1-587 LPSSHLVHPS CHGSGAQEVP SSRPQAALIW SREINGPPRD HLSSSPLLES ENSBTAP00000017338/1-585 PPSGSLACPS HPGNGSQEAP SMRPQATLIW MKDVNGPSRD HF-ALPLGET bmy_17922T0/1-458 LPSGNLACPS RPGNSSQEAP STRPQAALIW TRDVNGPSRD HF-SLPVLET BACU010883/1-483 LPSGNLACPS RSGNSSQEAP STRPQAALIW TRDVNGPSRD HF-SLPVLET ENSTTRP00000007638/1-587 LPSGNLACPS RPGSSSQEAP STRPPAALIC TRHVNGPSRD HF-SLPVLET 351 400 ENSP00000399588/1-587 SLSSTIQVDK NQGSLPCGAK ELDIMSNTPP PRPPKPSHLS ERRQEEW--- ENSBTAP00000017338/1-585 SLNSWF--DQ NQASLPYGVK ELDVMSNIPP PRPPKPSHLS EWWHKEQFLC bmy_17922T0/1-458 SLNSTVQGDQ NQASLPYGVK ELDVMSNTPP PRPPKPSHLS ERRHEEQLPC BACU010883/1-483 SLNSTVQRDQ NQASLPYGVK GLDVMSNTPP PRPPKPSHLS ERRHEEQLPC ENSTTRP00000007638/1-587 SLNSTVQVDQ NQASLPYGVK ELDVMSNTPP PRPPKPSHLS ERRHEEQLLC 401 450 ENSP00000399588/1-587 STHSGSKKPE CTLVPRRISL SGLDNMRTWK ADVEGQSLRH RDKRLSLNLP ENSBTAP00000017338/1-585 RGPSSLKKPE GTVVPRRISL SGLDDMRTWK ADVEGQSLRH RDKRLSLNLP bmy_17922T0/1-458 GGPSGIKKPE GAVVPRRISL SGLDNMRTWK GK-------- ---------- BACU010883/1-483 GGPSGIKKPE GTVVPRRISL SGLDNMRTWK GDVEGQSLRH RDKRLSLNLP ENSTTRP00000007638/1-587 GGPGSIKKPE GTVVPRRISL SGLDNMRTWK GDVEGQSLRH RDKRLSLNLP 451 500 ENSP00000399588/1-587 CRFSPMYPTA SASIEDSYVP MSPQAGASGL GPHCSPDDYI PMNSGSISSP ENSBTAP00000017338/1-585 CRFFPMSPPT STSTEDGYMP MSPQTAAFAL GPHDSSDDYI PMNSGSISSP bmy_17922T0/1-458 CQMLNF---- --GTETSLAP LSSLCPHEDV GP-------- ---------- BACU010883/1-483 CRFFPMSPPA STSTEDSYVP MGPQAIASAL GPHCSPDDYI PMSSGSISSP ENSTTRP00000007638/1-587 CRFFPMSPPA SASTEDSYVP MSPQAAASAL GPHCSPDDYI PMSSGSISSP 501 550 ENSP00000399588/1-587 LPELPANLEP PPVNRDLKPQ RKSRPPPLDL RNLSIIREHA SLTRTRTVPC ENSBTAP00000017338/1-585 LPELPVDLEP PPVNRDLKPQ RKTRPPTLDL KNLSTIREHT CLTRTHTVPC bmy_17922T0/1-458 ---------- ---------- ---------- ---------- ---------C BACU010883/1-483 LPELPVDLEP PPVNRDLKPQ RKPRSPPLDL KSLSTIREHT SLTRTHTVPC ENSTTRP00000007638/1-587 LPKLPADLEP PPVNRDLKPQ RKPRSPPLDL KSLSTIREHT SLTRTRTVPC 551 600 ENSP00000399588/1-587 SRTSFLSPER NGINSARFFA NPVSREDEES YIEMEEHRTA SSLSSGALTW ENSBTAP00000017338/1-585 NRTSFLSPER NGINSARFFA NSVSREEEKS YIQMEERRAT NSLSSGAVTW bmy_17922T0/1-458 RR-------- ---------- ---------- ---------- ---------- BACU010883/1-483 NRTSFLSPER NGINSARFFA NSVSREEEQS YMQMEEHGEA NLLSSGALTW ENSTTRP00000007638/1-587 NRTSFLSPER NGINPARFFA NSVSREEEQS YMQMEEHGGA NLLSSGALTW 601 650 ENSP00000399588/1-587 TKKFSLDYLA LDFNSASPAP MQQKLLLSEE QRVDYVQVDE QKTQALQSTK ENSBTAP00000017338/1-585 TKKFSLDYLA LDFNSASPAP VQQKILLSEE QRVDYVQVDE QKTQALQSTK bmy_17922T0/1-458 ---------- ---------- ---------- ---------- ---------- BACU010883/1-483 TRKFSLDYLA LDFNSASPAP VQQKLLFSEE QRVDYVQVDE QKTQALQSTK ENSTTRP00000007638/1-587 TRKFSLDYLA LDFNSASPAP VQQKLLFSEE QRVDYVQVDE QKTQALQSTK 651 700 ENSP00000399588/1-587 QEWTDERQSK V ENSBTAP00000017338/1-585 QEWTDERQSK V bmy_17922T0/1-458 ---------- - BACU010883/1-483 QEWTDERQSK A ENSTTRP00000007638/1-587 QEWTDERQSK V