KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 5  Type: P  Thu May 15 17:01:13 2014  Check: 00 ..

 Name: ENSP00000325638/1-103    Len:    191  Check:  8679  Weight:  1.00
 Name: ENSBTAP00000017347/1-93  Len:    191  Check:  3450  Weight:  1.00
 Name: ENSTTRP00000004492/1-86  Len:    191  Check:  7835  Weight:  1.00
 Name: bmy_06499T0/1-178        Len:    191  Check:  6315  Weight:  1.00
 Name: BACU012959/1-89          Len:    191  Check:  5269  Weight:  1.00

//


                         1                                                   50
ENSP00000325638/1-103    ---------- ---------- ---------- ---------- ---------- 
ENSBTAP00000017347/1-93  ---------- ---------- ---------- ---------- ---------- 
ENSTTRP00000004492/1-86  ---------- ---------- ---------- ---------- ---------- 
bmy_06499T0/1-178        MAVAQITRLA GSTKAASPAL SIQAESIHHH GQKQMLPQPE PEQTPPPETK 
BACU012959/1-89          ---------- ---------- ---------- ---------- ---------- 


                         51                                                 100
ENSP00000325638/1-103    ---------- ---------- ---------- ------MGSR CAKLNTGQSP 
ENSBTAP00000017347/1-93  ---------- ---------- ---------- ------MGSR CAKL------ 
ENSTTRP00000004492/1-86  ---------- ---------- ---------- ------MGSH CAKL------ 
bmy_06499T0/1-178        MSQPEEAVLP EAQESVLPPL HHVAFPPSPE RQPKWAMGSH CAKL------ 
BACU012959/1-89          ---------- ---------- ---------- ------MGSH CAKL------ 


                         101                                                150
ENSP00000325638/1-103    GHSPGHSTGH GRGHESSMKK LMACVSQDNF SLSSAGEEEE EEEEEGEEE- 
ENSBTAP00000017347/1-93  ------GTGH GRGHESSMKK LVACVSQDNF SLSSEGEEEE EGEEEEEEEG 
ENSTTRP00000004492/1-86  ------GTGH GRGHESSMKK FVACVSQDNF SLSSAGEEE- -----GEAEG 
bmy_06499T0/1-178        ------GTGH GRGHESSMKK LVACVSQDNF SLSSEGEEEE EEEEEGEAEG 
BACU012959/1-89          ------GTGH GRGHESSMKK LVACVSQDNF SLSSEGEEE- --EEEREAEG 


                         151                                                200
ENSP00000325638/1-103    EKEELPVQGK LLLLEPERQE EGHKD-NAEA QQSPEPKRTP S 
ENSBTAP00000017347/1-93  EEEELPVQGK LLLMEAGQQE EGAEDADSEV QQSPEPKQTR S 
ENSTTRP00000004492/1-86  EAEELPVQGK LLLLEPEWQE EGAKD-DSVA QKNPKPKQTQ S 
bmy_06499T0/1-178        EEEELPVQGK LLLMEPEWQE EGAKD-DSVA QQNPKPRQTQ S 
BACU012959/1-89          EEEELPVQGK LLLMEPEWQE EGAKD-DSVA QQNPKPKQTQ S