KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:01:13 2014 Check: 00 .. Name: ENSP00000354501/1-450 Len: 456 Check: 2585 Weight: 1.00 Name: ENSBTAP00000017348/1-455 Len: 456 Check: 408 Weight: 1.00 Name: BACU016464/1-430 Len: 456 Check: 5152 Weight: 1.00 Name: bmy_18427T0/1-344 Len: 456 Check: 2435 Weight: 1.00 Name: ENSTTRP00000011062/1-451 Len: 456 Check: 3740 Weight: 1.00 // 1 50 ENSP00000354501/1-450 MAASKTQGAV ARMQEDRDGS CSTVGGVGYG DSKDCILEPL SLPESPGGTT ENSBTAP00000017348/1-455 MAAPKTQGAA TQG-EDSDGN RGGAGGVSYE DTKDYILEPL SLPESPGGTT BACU016464/1-430 ---------- ---------- ------LSLP DSKDCILEPL SLPESPGGTT bmy_18427T0/1-344 MAAPKTQGAA TQGEEDGDGN RGGTGGVSYE DSKDCILEPL SLPESPGGTT ENSTTRP00000011062/1-451 MAAPKTQGAA TQGEEDGDGN RGGTGGVSYE DSKDCILEPL SLPENPGGTT 51 100 ENSP00000354501/1-450 TLEGSPSVPC IFCEEHFPVA EQDKLLKHMI IEHKIVIADV KLVADFQRYI ENSBTAP00000017348/1-455 SLEGSPSVPC IFCEEHFPVV EQDKLLKHMI IEHKIVIADV KLVADFRRYI BACU016464/1-430 SLEGSPSVPC IFCEEHFLID EQDKLLKHMI IEHKTVIADV KLVADFQRYI bmy_18427T0/1-344 SLEGSPSVPC IFCEEHFLID EQDKLLKHMI IEHKTVIADV KLVADFQRYI ENSTTRP00000011062/1-451 SLEGSPSVPC IFCEEHFLID EQDKLLKHMI IEHKTVIADV KLVADFQRYI 101 150 ENSP00000354501/1-450 LYWRKRFTEQ PITDFCSVIR INSTAPFEEQ ENYFLLCDVL PEDRILREEL ENSBTAP00000017348/1-455 LYWRKRFTEQ PITDFCSVIR INCTAPSEEQ DNYFLLCDVL PEDRILREEL BACU016464/1-430 SYWRKRFTEQ PITDFCSVIR INSTAPFEEQ DNYFLLCDVL PEDRILREEL bmy_18427T0/1-344 SYWRKRFTEQ PITDFCSVIR INSTAPFEEQ DNYFLLCDVL PEDRILREEL ENSTTRP00000011062/1-451 SYWRKRFTEQ PITDFCSVIR INSTAPFEEQ DNYFLLCDVL PEDRMLREEL 151 200 ENSP00000354501/1-450 QKQRLREILE QQQQERNDTN FHGVCMFCNE EFLGNRSVIL NHMAREHAFN ENSBTAP00000017348/1-455 QKQRLKEILE QQQQERNDNS FRGICMFCNE EFLGNRSILL NHMAREHAFN BACU016464/1-430 QKQRLKEILE QQQQERNDNN FQGSCMFCNE EFLGNRSVLL NHMAREHTFN bmy_18427T0/1-344 QKQR------ ---------- ---------- ---------- ---------- ENSTTRP00000011062/1-451 QKQRLKEILE QQQQERNDNS FQGSCMFCNE EFLGNRSVLL NHMAREHTFN 201 250 ENSP00000354501/1-450 IGLPDNIVNC NEFLCTLQKK LDNLQCLYCE KTFRDKNTLK DHMRKKQHRK ENSBTAP00000017348/1-455 IGLPDNIVNC NEFLCTLQKK LDNLQCLYCE KTFRDKNTLK DHMRKKQHRR BACU016464/1-430 IGLPDNIVNC NEFLCTLQKK LDNLQCLYCE KTFRDKNTLK DHMRKKQHRR bmy_18427T0/1-344 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011062/1-451 IGLPDNIVNC NEFLCTLQKK LDNLQCLYCE KTFRDKNTLK DHMRKKQHRR 251 300 ENSP00000354501/1-450 INPKNREYDR FYVINYLELG KSWEEVQLED DRELLDHQED DWSDWEEHPA ENSBTAP00000017348/1-455 INPKNREYDR FYVINYLELG KSWEEVQLED DRELLEHQED DWSDWEEHPV BACU016464/1-430 INPKNREYDR FYVINYLELG KSWEEVQLED DRELLDHQED DWSDWEGHPL bmy_18427T0/1-344 ---------- ------LELG KSWEEVQLED DRELLDHQED DWSDWEGHPL ENSTTRP00000011062/1-451 INPKNREYDR FYVINYLELG KSWEEVQLED DRELLDHQED DWSDWEEHPL 301 350 ENSP00000354501/1-450 SAVCLFCEKQ AETIEKLYVH MEDAHEFDLL KIKSELGLNF YQQVKLVNFI ENSBTAP00000017348/1-455 SAVCLFCEKQ AETIEKLCVH MEDAHEFDLL KIKSELGLNF YQQVKLVNFI BACU016464/1-430 SAVCLFCEKQ AETIEKLCVH MEDAHEFDLL KIKSELGLNF YQQVKLVNFI bmy_18427T0/1-344 SAVCLFCEKQ AETIEKLCVH MEDAHEFDLL KIKSELGLNF YQQVKLVNFI ENSTTRP00000011062/1-451 SAVCLFCEKQ AETIEKLCVH MEDAHEFDLL KIKSELGLNF YEQVKLVNFI 351 400 ENSP00000354501/1-450 RRQVHQCRCY GCHVKFKSKA DLRTHMEETK HTSLLPDRKT WDQLEYYFPT ENSBTAP00000017348/1-455 RRQIHQCRCY GCQEKFRSKA DLRTHMEEAK HTALLPEKQI WDQPQYYFPT BACU016464/1-430 RRQIHQCRCY GCHEKFKSKA DLRTHMEEAR HTSLLPERQT WDQPQYYFPT bmy_18427T0/1-344 RRQIHQCRCY GCHEKFKSKA DLRTHMEEAK HTSLLPERQT WDQPQYYFPT ENSTTRP00000011062/1-451 RRQIHQCRCY GCHEKFKSKA DLRTHMEEAK HTSLLPERQT WDQPQYYFPT 401 450 ENSP00000354501/1-450 YENDTLLCTL SDSESDLTAQ EQNENVPIIS EDTSKLYALK QSSILNQLLL ENSBTAP00000017348/1-455 YENDTLLCTL SDSESDLTAQ EQNGNIAIIS EDTSKLHALK QSSILNQLLL BACU016464/1-430 YENDTLLCTL SDSESDLTAQ EQNGNIAIIS EDTSKLHALK QSSILNQLRL bmy_18427T0/1-344 YENDTLLCTL SDSESDLTAQ EQNGNIAIIS EDTSKLHALK QSSILNQLLL ENSTTRP00000011062/1-451 YENDTLLCTL SDSESDLTAQ EQNGNIAIIS EDTSKLHALK QSSILNQLLL 451 500 ENSP00000354501/1-450 ------ ENSBTAP00000017348/1-455 HESLKN BACU016464/1-430 HESLKN bmy_18427T0/1-344 HESLKN ENSTTRP00000011062/1-451 H-----