KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:01:17 2014 Check: 00 .. Name: ENSP00000417404/1-348 Len: 400 Check: 3105 Weight: 1.00 Name: ENSBTAP00000017371/1-356 Len: 400 Check: 4741 Weight: 1.00 Name: BACU006906/1-345 Len: 400 Check: 5780 Weight: 1.00 Name: bmy_12206T0/1-400 Len: 400 Check: 8844 Weight: 1.00 Name: ENSTTRP00000015871/1-348 Len: 400 Check: 8078 Weight: 1.00 // 1 50 ENSP00000417404/1-348 MGPRARPALL LLMLLQTAVL QGRLLRSHSL HYLFMGASEQ DLGLSLFEAL ENSBTAP00000017371/1-356 MGPRARPALL LLILLRTAAT QGRPPRSHSL RFLFMGASKP DLGLPLFEAL BACU006906/1-345 MGPRARPALL LLILLRTVAT QGRSPRSHSL RFLFMGASEP DLGLPLFEAL bmy_12206T0/1-400 MGPRARPALL LLLLLRTVAT QGRSPRSHSL RFLFMGASEP DLGLPLFEAL ENSTTRP00000015871/1-348 MGPRARPALL LLILLRTVAT QGRPPRSHSL RFLFMGASEP DLGLPLFEAL 51 100 ENSP00000417404/1-348 GYVDDQLFVF YDHESRRVEP RTPWVSSRIS SQMWLQLSQS LKGWDHMFTV ENSBTAP00000017371/1-356 GYVDDQLFVS YDHESRRAER RAPWLWGRAT SQLWLQLSQN LKGWDHMFIV BACU006906/1-345 GYVDDQLFVS YDHESRRVEP RAPWRWGRAT SQLWLQLSQS LKGWDHMFIV bmy_12206T0/1-400 GYVDDQLFVS YDHESRRAAP RAPWLWGRAN SQLWLQLSQS LKGWDHMFIV ENSTTRP00000015871/1-348 GYVDDQLFVS YDHESRRAEP RAPWLWGRAT SQLWLQLSQS LKGWDHMFIV 101 150 ENSP00000417404/1-348 DFWTIMENHN HSK------- -ESHTLQVIL GCEMQEDNST EGYWKYGYDG ENSBTAP00000017371/1-356 DFWTIMDNHN QSKVTKLGAL PESHTLQVIL GCELQEDNST RGFWKYGYDG BACU006906/1-345 DFWTIMDNHN QSKVTKLGVL PESHTLQVIL GCEVQEDNST RGFWKYGYDG bmy_12206T0/1-400 DFWTIMDNHN QSKVTKLGVL PESHTLQVIL GCEVQEDNST GGLWKYGYDG ENSTTRP00000015871/1-348 DFWTIMDNHN QSK------- -ESHTLQVIL GCEVQEDNST RGFWKYGYDG 151 200 ENSP00000417404/1-348 QDHLEFCPDT LDWRAAEPRA WPTKLEWERH KIRARQNRAY LERDCPAQLQ ENSBTAP00000017371/1-356 QDHLEFRPET LDWRAAEPRA QVTKLEWEVN KIRAKQNRAY LDRDCPEQLL BACU006906/1-345 QDHLEFRPEM LDWRAAEPRA QTTKLEWEVN KIRAKQNRAY LERDCPEQLR bmy_12206T0/1-400 QDHLEFRPET LDWRAAEPRA RTTKLEWEVN KIRAKQNRAY LERDCPQQLQ ENSTTRP00000015871/1-348 QDHLEFHPET LDWRAAEPRA RTTKLEWEVN KIRAKQNRAY LERGCPEQLQ 201 250 ENSP00000417404/1-348 QLLELGRGVL DQQVPPLVKV THHVTSSVTT LRCRALNYYP QNITMKWLKD ENSBTAP00000017371/1-356 HLLELGRGPL EQQVPPLVKV THHVTSSLTT LRCRALNFYP QNITIRWLKD BACU006906/1-345 RLLELGRGAL DQQALPLVKV THHVASAVTT LRCQALNFYP QDITMRWLKD bmy_12206T0/1-400 RLLELGRGAL DQQALPLVKV THHVASAVTT LRCQALNFYP QDITMRWLKD ENSTTRP00000015871/1-348 RLLELGRGAL DRQALPLVKV THHVASAVTT LRCQALNFYP QDITMRWLKD 251 300 ENSP00000417404/1-348 KQPMDAKEFE PKDVLPNGDG TYQGWITLAV PPGEEQRYTC QVEHPGLDQP ENSBTAP00000017371/1-356 KQFLDAKEIK PEDVLPNGDG TYQAWVALAM LPGEEQRYSC QVEHPGLDQP BACU006906/1-345 RQPLDAKDVE PEDVLPNGDG TYQGWVALAV LPGEEQRYSC QVEHPGLDQP bmy_12206T0/1-400 RQPLDAKDVE PEDVLPNGDG TYQGWVALAV LPGEEQRYSC QVEHPGLDQP ENSTTRP00000015871/1-348 RQPLDAKDVE PEDVLPNGDG TYQGWVALAV LPGEEQRYSC QVQHPGLDQP 301 350 ENSP00000417404/1-348 LIVIW----- ---------- ---------- ---------- ---------E ENSBTAP00000017371/1-356 LTATW----- ---------- ---------- ---------- ---------E BACU006906/1-345 LTATW----- ---------- ---------- ---------- ---------E bmy_12206T0/1-400 LTATWGMDES QGLRKPGVGG MGVVNRAVRG GLALGWGSDH GLSLAFAILE ENSTTRP00000015871/1-348 LTATW----- ---------- ---------- ---------- ---------E 351 400 ENSP00000417404/1-348 PSPSGTLVIG VISGIAVFVV ILFIGILFII LRKRQGSRGA MGHYVLAERE ENSBTAP00000017371/1-356 PSLSGTLVTG ILSGIAVCVI IFLIGILFRI LKRRQSSRGA AVNYALAECE BACU006906/1-345 PSLSGTLVTG IISGIAVCII LFLIGILFRI LRRRQAS--- --------SE bmy_12206T0/1-400 PSLSGTLVTG IISGIAVCII LFLIGILFRI LRRRQASRGA AGDYVLAECE ENSTTRP00000015871/1-348 PSLSGTLVTG IISGIAVCII LFLIGILFSI LRRRQASRGA AGDYVLAECE