KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:01:17 2014 Check: 00 .. Name: bmy_07119T0/1-236 Len: 300 Check: 8448 Weight: 1.00 Name: ENSP00000282841/1-300 Len: 300 Check: 9118 Weight: 1.00 Name: ENSBTAP00000017376/1-300 Len: 300 Check: 497 Weight: 1.00 Name: BACU003375/1-258 Len: 300 Check: 1078 Weight: 1.00 // 1 50 bmy_07119T0/1-236 MEKTQETAQR ILLEPCKYLP QLPGKQVRTK LSQAINHWLK VPEDKLQIIT ENSP00000282841/1-300 MEKTQETVQR ILLEPYKYLL QLPGKQVRTK LSQAFNHWLK VPEDKLQIII ENSBTAP00000017376/1-300 MEKTQETVQR ILLEPYKYLL QLPGKQVRTK LSQAFNHWLK VPEDKLQIII BACU003375/1-258 MEKTQETAQR ILLEPYKYLL QLPGKQVRTK LSQAFNHWLR VPEDKLQIII 51 100 bmy_07119T0/1-236 EVTEMVHNAS LLFDDVEDNS KLRHGFPVAH SIYGIPS--- ---------- ENSP00000282841/1-300 EVTEMLHNAS LLIDDIEDNS KLRRGFPVAH SIYGIPSVIN SANYVYFLGL ENSBTAP00000017376/1-300 EVTEMLHNAS LLIDDIEDNS KLRRGFPVAH SIYGIPSVIN SANYVYFLGL BACU003375/1-258 EVTEMLHNAS LLIDDIEDNS KLRRGFPVAH SIYGIPSVIN SANYVYFLGL 101 150 bmy_07119T0/1-236 ---------- ---------- ---------- ---------- ---------- ENSP00000282841/1-300 EKVLTLDHPD AVKLFTRQLL ELHQGQGLDI YWRDNYTCPT EEEYKAMVLQ ENSBTAP00000017376/1-300 EKVLTLNHPD AVKLFTRQLL ELHQGQGLDI YWRDNYTCPT EEEYKAMVLQ BACU003375/1-258 AKVLTLDHPD AVKLFTRQLL ELHQGQGLDI YWRDNYTCPT EEEYKAMVLQ 151 200 bmy_07119T0/1-236 -TGGLFGLTV GLMQLFSDYK EDLKPLLNTP GLFFQIRDDY ANLHSKEYSE ENSP00000282841/1-300 KTGGLFGLAV GLMQLFSDYK EDLKPLLNTL GLFFQIRDDY ANLHSKEYSE ENSBTAP00000017376/1-300 KTGGLFGLAV GLMQLFSDYK EDLKPLLDTL GLFFQIRDDY ANLHSKEYSE BACU003375/1-258 KTGGLFGLAV GLMQLFSDYK EDLKPLLNTL GLFFQIRDDY ANLHSKEYSE 201 250 bmy_07119T0/1-236 NKNVCEDLTE GKFSFPTIHA IWSRPETTQV QNISCQRTEN VDIKKYCVHY ENSP00000282841/1-300 NKSFCEDLTE GKFSFPTIHA IWSRPESTQV QNILRQRTEN IDIKKYCVHY ENSBTAP00000017376/1-300 NKSFCEDLTE GKFSFPTIHA IWSRPESTQV QNILRQRTEN IDIKKYCVHY BACU003375/1-258 NKSFCEDLTE GKFSFPTIHA IWSRPESTQV QNILRQRTEN VDVKKYCVHY 251 300 bmy_07119T0/1-236 LEKVGSFEYT QNTLKEIESK AYKQIDACGG NPELVALTKH LSKMFKEENE ENSP00000282841/1-300 LEDVGSFEYT RNTLKELEAK AYKQIDARGG NPELVALVKH LSKMFKEENE ENSBTAP00000017376/1-300 LENVGSFEYT RNTLKELESK AYKQIDARGG NPELVALIKH LSKMFKEENE BACU003375/1-258 LEN--PLELS ---------- ---------- ---------- ----------