KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:01:18 2014 Check: 00 .. Name: bmy_10093T0/1-484 Len: 625 Check: 8361 Weight: 1.00 Name: BACU009285/1-522 Len: 625 Check: 6291 Weight: 1.00 Name: ENSTTRP00000010921/1-597 Len: 625 Check: 5774 Weight: 1.00 Name: ENSP00000311505/1-598 Len: 625 Check: 9367 Weight: 1.00 Name: ENSBTAP00000017379/1-598 Len: 625 Check: 8826 Weight: 1.00 // 1 50 bmy_10093T0/1-484 ---------- ---------- MESNIH---- ---------- ---------- BACU009285/1-522 ---------- ---------- MESNIH---- ---------- ---------- ENSTTRP00000010921/1-597 MKPMGRDPRI LSLAAEVAIS PEQNVPVILL KLKEIINNTP FGSSELKKVK ENSP00000311505/1-598 MKPTGTDPRI LSIAAEVAKS PEQNVPVILL KLKEIINITP LGSSELKKIK ENSBTAP00000017379/1-598 MKPTGTDPRI LSLAAEVAKS PEQNVPVILL KLKEIINNTP LGSSELKKIK 51 100 bmy_10093T0/1-484 ---------- -----LSRLI SQHDDEATRT STSE------ --GLEEGEVE BACU009285/1-522 ---------- -----LSSLI SRHDDEATRT STLE------ --GLEEGEVE ENSTTRP00000010921/1-597 QDIYCYDLIQ YCLLVLSQDC SRIQGGWTTI SQLTQILSHC CVGLEPGE-D ENSP00000311505/1-598 QDIYCYDLIQ YCLLVLSQDY SRIQGGWTTI SQLTQILSHC CVGLEPGE-D ENSBTAP00000017379/1-598 QDIYCYDLIQ YCLLVLSQDC SRIQGGWTTV SQLTQILSHC CVGLEPGE-D 101 150 bmy_10093T0/1-484 GETLL--IVE LEDQASVDLS HDQSGDSLNS DEGDVSWREE QLSYF--CDK BACU009285/1-522 GETLL--IIE SEDQASVDLS HDQSGDSLNS DEGDVSWREE QLSYF--CDK ENSTTRP00000010921/1-597 AEEFYNELLP SAVENFLVLG RQLQTCFINA SKGEE--KDA LLHFFEIVTD ENSP00000311505/1-598 AEEFYNELLP SAAENFLVLG RQLQTCFINA AKAEE--KDE LLHFFQIVTD ENSBTAP00000017379/1-598 AEEFYNELLP SAAENFLVLG RRLQTCFINA AKGEE--KDA LLHFFEVVTD 151 200 bmy_10093T0/1-484 CQKW------ --IPAILRSD HFLHLLQTDN VQVGSTVMTM LQNILQIS-- BACU009285/1-522 CQKW------ --IPAILRSD HFLHLLQTDN VQVGSTVMTM LQNILQISSG ENSTTRP00000010921/1-597 SLFWLLGGHV QLIQNVLRSD HFLHLLQTDN VQVGSTVMTM LQNILQINSG ENSP00000311505/1-598 SLFWLLGGHV ELIQNVLQSD HFLHLLQADN VQIGSAVMMM LQNILQINSG ENSBTAP00000017379/1-598 SLFWLLGGHV QLIQNVLKSD HFLRLLQTDS VQIGSMVMTL LQNILQINSG 201 250 bmy_10093T0/1-484 ---------- ---------- ---------- ---------- ---------- BACU009285/1-522 DLLRIEGKTL HSILDEVVFK LLSTPSPVIR STATRLLLLM AESHQEILIL ENSTTRP00000010921/1-597 DLLRIEVKTL HSILDEVVFK LLSTPSPVIR STATRLLLLM AKSHQEILIL ENSP00000311505/1-598 DLLRIGRKAL YSILDEVIFK LFSTPSPVIR STATKLLLLM AESHQEILIL ENSBTAP00000017379/1-598 DLLRIEGKIL HSILDEVVFK LLSTPSPVIR GTATKLLLLM AESHQEILIL 251 300 bmy_10093T0/1-484 ---------- RSLLNKQEPG TEFSQELRQL IGLLSPKVYQ EVEEQKLHQA BACU009285/1-522 LRLSACYKGL RSLLNKQEPG TEFSQELRQL IGLLSPKVYQ EVEEQKLHQA ENSTTRP00000010921/1-597 LRLSACYKXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000311505/1-598 LRQSTCYKGL RRLLSKQETG TEFSQELRQL VGLLSPMVYQ EVEEQKLHQA ENSBTAP00000017379/1-598 LRLSACYKGL RSLLNKQEPG TEFSQELRQL IGLLSPKACQ EVKDQKQHKA 301 350 bmy_10093T0/1-484 ACLIQAYWKG FQTRKRLKKL PSAVITLQRS FRSKRTKMLL KLSRQKEEED BACU009285/1-522 ACLIQAYWKG FQTRKRLKKL PSAVITLQRS FRSKRTKMLL KLSRQKEEED ENSTTRP00000010921/1-597 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXSKRTKMLL KLSRQKEEED ENSP00000311505/1-598 ACLIQAYWKG FQTRKRLKKL PSAVIALQRS FRSKRSKMLL EINRQKEEED ENSBTAP00000017379/1-598 ACLIQAYWKG FQTRKRLKKL PSAVITLQRS FRSKRTKMLM KLSRQKEEED 351 400 bmy_10093T0/1-484 RRLQLQLQRQ RAMRLSRELR LSMLEIVHPG QVEKHNREIE EKSALIIQKH BACU009285/1-522 RRLQLQLQRQ RAMRLSRELR LSMLEIVHPG QVEKHNREIE EKSALIIQKH ENSTTRP00000010921/1-597 CRLQLQLQRQ RAMRLSRELR LSMLEIVHPG QVEKHNREIE EKSALIIQKH ENSP00000311505/1-598 LKLQLQLQRQ RAMRLSRELQ LSMLEIVHPG QVEKHYREME EKSALIIQKH ENSBTAP00000017379/1-598 HRLQLQIQRQ RAMRLSREIR LNMLEIVHPG QVEKHNREIE EKSALIIQKH 401 450 bmy_10093T0/1-484 WRGFIYTISG NVHIGPDNTQ QKIEPHHTAV LAEGSFLMHT NEEISQAFLD BACU009285/1-522 WRG--YRERK NFC----QQR PSLVEYKAAV TLQ------- ---------- ENSTTRP00000010921/1-597 WRG--YRERK NFR----QQR PSLVEYKAAV TLQ------- ---------- ENSP00000311505/1-598 WRG--YRERK NFH----QQR QSLIEYKAAV TLQ------- ---------- ENSBTAP00000017379/1-598 WKG--YRERK NFR----QQR PSLTEYKAAV ILQ------- ---------- 451 500 bmy_10093T0/1-484 FRNALKFLAK CXKKKKLFAP WQGLRELTDA CRVELKQQVD DYIRRHPGSE BACU009285/1-522 -RAALKFLAK CRKKKKLFAP WQGLRELTDA CRVELKQQVD DYIRRHPGSE ENSTTRP00000010921/1-597 -RATLKFLAK CRKKKKLFAP WQGLRELTDA RRVELKQQVD DYIRRHPGSE ENSP00000311505/1-598 -RAALKFLAK CRKKKKLFAP WRGLQELTDA RRVELKKRVD DYVRRHLGSP ENSBTAP00000017379/1-598 -RATLKFLAK CRKKKKLFAP WPGLRELTDA RRIELKQQVD DYIRRHPGSQ 501 550 bmy_10093T0/1-484 VSGVINRELH SQAQEQLQHY FMGRALEERA QQHREALTAR INTNIEQLMK BACU009285/1-522 VSGVINRELH SQAQERLQHY FMGRALEERA QQHREALTAR INTNIEQLMK ENSTTRP00000010921/1-597 VSDVISRELH SQAQERLQHY FMGRALEERA QQHREALMAR INTNIEQLMK ENSP00000311505/1-598 MSDVVSRELH AQAQERLQHY FMGRALEERA QQHREALIAQ ISTNVEQLMK ENSBTAP00000017379/1-598 ISDVTSRELH SQAQERLQCY FMGRALEERS QQHREALMAQ ISTNIEQLMK 551 600 bmy_10093T0/1-484 APSLKEAEGK EPELFLSRSR PVAAKAKQAH LNTLKHIQAP WWKKLGEEAR BACU009285/1-522 APSLKEAEGK EPELFLSRSR PVAAKAKQAH LNTLKHIQAP WWKKLGEEAR ENSTTRP00000010921/1-597 APSLKEAEGK EPELFLSRSR PVAAKAKQAH LTTLKHIQAP WWKKLGEEAR ENSP00000311505/1-598 APSLKEAEGK EPELFLSRSR PVAAKAKQAH LTTLKHIQAP WWKKLGEESG ENSBTAP00000017379/1-598 APSLKEAEGK DPELFLSRSR PVAAKAKQAH LTTLKHIQAP WWKKLGEEAG 601 650 bmy_10093T0/1-484 DEIDVPKDEL SIELGTLFIG GTKPP BACU009285/1-522 DEIDIPKDEL SIELGTLFIG GTKPP ENSTTRP00000010921/1-597 DEIDVPKDEL SIEL-TLFIG GTKPP ENSP00000311505/1-598 DEIDVPKDEL SIELENLFIG GTKPP ENSBTAP00000017379/1-598 DDIDIPKDEL SVELGTLFIG GTKPP