KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:01:22 2014 Check: 00 .. Name: ENSP00000383986/1-454 Len: 484 Check: 200 Weight: 1.00 Name: ENSBTAP00000017389/1-449 Len: 484 Check: 8421 Weight: 1.00 Name: ENSTTRP00000001815/1-452 Len: 484 Check: 1606 Weight: 1.00 Name: bmy_18963T0/1-438 Len: 484 Check: 3734 Weight: 1.00 Name: BACU018546/1-452 Len: 484 Check: 1815 Weight: 1.00 // 1 50 ENSP00000383986/1-454 ---------- ---------- ---------M ELATRYQIPK EVADIFNAPS ENSBTAP00000017389/1-449 ---------- ---------- ---------M ALATRSQIPK EVADIFNAPS ENSTTRP00000001815/1-452 ---------- ---------- ---------- -PFFNPQIPK EVADIFNAPS bmy_18963T0/1-438 MELATGSQHR EFFRVPSLNE FEIQPPLILS SFFQSKQIPK EVADIFNAPS BACU018546/1-452 ---------- ---------- ---------- --FQSKQIPK EVADIFNAPS 51 100 ENSP00000383986/1-454 DDEEFVGFRD DVPMETLSSE ESCDSFDSLE SGKQQDVRFH SKYFTEELRR ENSBTAP00000017389/1-449 DDEEFVGFRD DVPMETLSSE ESCDSFDSLE SGKQQDVRFH SKYFTEELRR ENSTTRP00000001815/1-452 DDEEFVGFRD DVPMETLSSE ESCYSFDSLE SGKQQDVRFQ STTFTEELRR bmy_18963T0/1-438 DDEEFVGFRD DVPMETLSSE ESCDSFDSLE SGKQ------ ---------- BACU018546/1-452 DDEEFVGFRD DVPMETLSSE ESCDSFDSLE SGKQQDVRFH SKYFTDELRR 101 150 ENSP00000383986/1-454 IFIEDTDSET EDFAGFTQSD LNGKTNPEVM VVESDLSDDG KASLVSEEEE ENSBTAP00000017389/1-449 IFIEDTDSEM EDFEGFTQTD LNVNSNPE-- LVESDLSDDS KESFVSGEED ENSTTRP00000001815/1-452 IFREDSDSET EDFEGFTQSD LNVNSNAEVM LVESELSDDG KASFMSEEEE bmy_18963T0/1-438 ---------- ---------- ---------- LVESELSDDG KASFMSEEEE BACU018546/1-452 IFREDTDSEM EDFEGFTQSD LNVNSDPEVM LVESELSDDG KASFMSEEEE 151 200 ENSP00000383986/1-454 DEEEDKATPR RSRSRRSSIG LRVAFQFPTK KLANKPDKNS SSEQLFSSAR ENSBTAP00000017389/1-449 DDEEK-ATAR RSRPRRSSIG LRVAFQFPTK KLAKKADKNG SAEPLFPGSR ENSTTRP00000001815/1-452 DEEEE-APPR SSRPRRSSIG LRVAFQFPTK KPAKNAGKNS SPEPLFSGSH bmy_18963T0/1-438 DDEEAKAPPR SSRPRRSSIG LRVAFQFPTK KPAKNADKNS SPEPLFSGSR BACU018546/1-452 DDEEEKAPPR SSRPRRSSIG LRVAFQFPTK KPAKNADKNS SPEPLFSGSR 201 250 ENSP00000383986/1-454 LQNEKKTILE RKKDCRQVIQ REDSTSESED DSRDESQESS DALLKRTMNI ENSBTAP00000017389/1-449 LQDNKKMILG RKTSCRQEKE SEDSASESED DSRDEGQESS DALLKRTMNI ENSTTRP00000001815/1-452 IQDSKSGILG RKTSCRQRKE REDSASESED DSRDEGQESS DALLKRTMNI bmy_18963T0/1-438 TQDSKNGILG RKTSCRQGKE REDSASESED DSRDEGQESS DALLKRTMNI BACU018546/1-452 IQDGKNGILG RKTSCRQGKE REDSASESED DSRDEGQESS DALLKRTMNI 251 300 ENSP00000383986/1-454 KENKAMLAQL LAELNSMPDF FPVRTPTSAS RKKTVRRAFS EGQITRRMNP ENSBTAP00000017389/1-449 KENKAMLAQL LAELNSMPDF FPVRTPNSAS KKKTTRRAFS EGQVTRRTNP ENSTTRP00000001815/1-452 EENKAMLAQL LAELNSMPDF FPLRTPNSAS KKKAVRRAFS EGQITRRTNP bmy_18963T0/1-438 KENKAMLAQL LAELNSMPDF FPVRTPNSAS KKKAVRRAFS EGQITRRTNP BACU018546/1-452 KENKAMLAQL LAELNSMPDF FPVRTPNSAS KKKAVRRAFS EGQITRRTNP 301 350 ENSP00000383986/1-454 TRSARPPEKF ALENFTVSAA KFAEEFYSFR RRKTI-GGKC REYRRRHRIS ENSBTAP00000017389/1-449 ARSARPPEKF ALENFTVSAA KFAEEFYSFR RRKT---GKC QGHRRRRCVS ENSTTRP00000001815/1-452 ARSARPPEKF ALENFTVSAA KFAEEFYSFR RRKTTSGGRC QGYRRRRRIS bmy_18963T0/1-438 ARSARPPEKF ALESFTVSAA KFAEEFYSFR RRKTTSGGRC QGYRRRRCVS BACU018546/1-452 ARSARPPEKF ALENFTVSAA KFAEEFYSFR RRKTTSGGRC QGYRRRRCVS 351 400 ENSP00000383986/1-454 SFRPVEDITE EDLENVAITV RDKIYDKVLG NTCHQCRQKT IDTKTVCRNQ ENSBTAP00000017389/1-449 SFRPVEDITE EDLENVAITV RDKIYDKVLG NTCHQCRQKT IDTKTVCRNQ ENSTTRP00000001815/1-452 SFRPVEDITE EDLENVAITV RDKIYDKVLG NTCHQCRQKT IDTKTVCRNQ bmy_18963T0/1-438 SFRPVEDITE EDLENVAITV RDKIYDKVLG NTCHQCRQKT IDTKTVCRNQ BACU018546/1-452 SFRPVEDITE EDLENVAITV RDKIYDKVLG NTCHQCRQKT IDTKTVCRNQ 401 450 ENSP00000383986/1-454 GCCGVRGQFC GPCLRNRYGE DVRSALLDPD WVCPPCRGIC NCSYCRKRDG ENSBTAP00000017389/1-449 SCGGVRGQFC GPCLRNRYGE DVRSALLDPD WVCPPCRGIC NCSYCRRRDG ENSTTRP00000001815/1-452 SCGGVRGQFC GPCLRNRYGE DVRSALLDPG WVCPPCRGIC NCSYCRKRDG bmy_18963T0/1-438 SCGGVRGQFC GPCLRNRYGE DVRSALLDPG WMCPPCRGIC NCSYCRKRDG BACU018546/1-452 SCGGVRGQFC GPCLRNRYGE DVRSALLDPG WMCPPCRGIC NCSYCRKRDG 451 500 ENSP00000383986/1-454 RCATGILIHL AKFYGYDNVK EYLESLQKEL VEDN ENSBTAP00000017389/1-449 RCATGILIHL AKFYGYNNVK EYLESLQKQL VEDN ENSTTRP00000001815/1-452 RCATGILIHL AKFYGYNNVK EYLESLQKQL VKDN bmy_18963T0/1-438 RCATGILIHL AKFYGYNNVK EYLESLQKQL VKDN BACU018546/1-452 RCATGILIHL AKFYGYNNVK EYLESLQKQL VKDN