KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:01:23 2014 Check: 00 .. Name: ENSP00000287139/1-347 Len: 348 Check: 3071 Weight: 1.00 Name: ENSBTAP00000017405/1-346 Len: 348 Check: 5277 Weight: 1.00 Name: ENSTTRP00000002983/1-348 Len: 348 Check: 9397 Weight: 1.00 Name: bmy_16725T0/1-348 Len: 348 Check: 9201 Weight: 1.00 Name: BACU001933/1-280 Len: 348 Check: 4834 Weight: 1.00 // 1 50 ENSP00000287139/1-347 MHAHCLP-FL LHAWWALLQA GAATVATALL RTRGQPSSPS PLAYMLSLYR ENSBTAP00000017405/1-346 MHAQCLWLFL LHAWWALLQA GAAMVAPVPL RPWGQPSSPS PLAYMLSLYR ENSTTRP00000002983/1-348 MHAHSLLLFL LQVWWALLQA GATMVAPVPL RTWGQPSSPS PLAYMLSLYR bmy_16725T0/1-348 MHAHSLPLFL LHAWWAVLQA GATMVAPVPL RTWGQPSSPS PLAYMLSLYR BACU001933/1-280 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000287139/1-347 DPLPRADIIR SLQAEDVAVD GQNWTFAFDF SFLSQQEDLA WAELRLQLSS ENSBTAP00000017405/1-346 EPLPRADIIR SLQAQDMQVD GQNWTFAFDF SFLSQEEDLE WAELRLQLSS ENSTTRP00000002983/1-348 EPLLRADIIR SLQAQDVEVD GQNWTFAFDF SFLGQEEDLA WAELRLQLSS bmy_16725T0/1-348 EPLLRADIIR SLQAQDVEMD GQNWTFAFDF SFLGQEEDLA WAELRLQLSS BACU001933/1-280 ---------- --------MD GQNWTFAFDF SFLGQEEDLA WAELRLQLSS 101 150 ENSP00000287139/1-347 PVDLPTEGSL AIEIFHQPKP DTEQASDSCL ERFQMDLFTV TLSQVTFSLG ENSBTAP00000017405/1-346 PVALPPNIPL SIEIFHQRKL --DKNPPDCL ERFRMDLFTV TLSQVTFSSG ENSTTRP00000002983/1-348 PVALTPDVPL SIEIFHQPKL NEDKDPPNCP ERLRMDLFTV TLSQVTFSSG bmy_16725T0/1-348 PVALPPDVPL SIEIFHQPKL NEDKDPPNCL ERLRMDLFTV TLSQVTFSSG BACU001933/1-280 PVALPPDVPL SIEIFHQPKL NEDKDTPNCL ERLRMDLFTV TLSQVTFSLG 151 200 ENSP00000287139/1-347 SMVLEVTRPL SKWLKHPGAL EKQMSRVAGE CWPRPPTPPA TNVLLMLYSN ENSBTAP00000017405/1-346 SMVLEVTRPL SKWLKHPGGL REQTSSLAGE CWRRPPSPPV TDVLLLLYSN ENSTTRP00000002983/1-348 SMVLEVTRPL SKWLKHPGEL REQMSSLAGE CWQRPPTSPV TNVLLMLYSN bmy_16725T0/1-348 SMVLEVTRPL SKWLKHPGEL REQMSSLAGE CWRQPPTPPV TNVLLMLYSN BACU001933/1-280 SMVLEVTRPL SKWLKHPGEL REQMSSLAGE CWRQPPTPPV TSVLLMLYSN 201 250 ENSP00000287139/1-347 LSQEQRQLGG STLLWEAESS WRAQEGQLSW EWGKRHRRHH LPDRSQLCRK ENSBTAP00000017405/1-346 LSPEQRRLGG STLLWEAESS WRAQEGQLSR ERGTRHRRYH VQDRSQLCRK ENSTTRP00000002983/1-348 LSLERKRLGG STLLWEAESS WRVQEGQLSR ERARRHRRYH LQDRNQLCRK bmy_16725T0/1-348 LSPERRRLGG STLLWEAESS WRVQEGQLSR ERGRRHRRYH LQDRNQLCRK BACU001933/1-280 LSPERRRLGG STLLWEAESS WRVQEGQLSR ERGRRHRRYH LQDRNQLCRK 251 300 ENSP00000287139/1-347 VKFQVDFNLI GWGSWIIYPK QYNAYRCEGE CPNPVGEEFH PTNHAYIQSL ENSBTAP00000017405/1-346 VKFQVDFNLI GWGSWIIYPK QYNAYRCEGE CPNPVGEEFH PTNHAYIQSL ENSTTRP00000002983/1-348 VKFQVDFNLI GWGSWIIYPK QYNAYRCEGE CPNPVGEEFH PTNHAYIQSL bmy_16725T0/1-348 VKFQVDFNLI GWGSWIIYPK QYNAYRCEGE CPNPVGEEFH PTNHAYIQSL BACU001933/1-280 VKFQVDFNLI GWGSWIIYPK QYNAYRCEGE CPNPVGEEFH PTNHAYIQSL 301 350 ENSP00000287139/1-347 LKRYQPHRVP STCCAPVKTK PLSMLYVDNG RVLLDHHKDM IVEECGCL ENSBTAP00000017405/1-346 LKRYQPHRVP ATCCAPVKTK PLSMLYVDNG RVLLDHHKDM IVEECGCL ENSTTRP00000002983/1-348 LKRYQPHRVP STCCAPVKTK PLSMLYVDNG RVLLDHHKDM IVEECGCL bmy_16725T0/1-348 LKRYQPHRVP STCCAPVKTK PLSMLYVDNG RVLLDHHKDM IVEECGCL BACU001933/1-280 LKRYQPHRVP STCCAPVKTK PLSMLYVDNG RVLLDHHKDM IVEECGCL