KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:01:24 2014 Check: 00 .. Name: ENSP00000226247/1-648 Len: 1350 Check: 2907 Weight: 1.00 Name: ENSBTAP00000017410/1-644 Len: 1350 Check: 5923 Weight: 1.00 Name: ENSTTRP00000003767/1-645 Len: 1350 Check: 9690 Weight: 1.00 Name: bmy_00108T0/1-646 Len: 1350 Check: 718 Weight: 1.00 Name: BACU010507/1-1345 Len: 1350 Check: 2988 Weight: 1.00 // 1 50 ENSP00000226247/1-648 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000017410/1-644 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000003767/1-645 ---------- ---------- ---------- ---------- ---------- bmy_00108T0/1-646 ---------- ---------- ---------- ---------- ---------- BACU010507/1-1345 MATCWQGLWA YRFYLIVFFL PIILLPLPIL IPTKEAYCAY TIILMALLWC 51 100 ENSP00000226247/1-648 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000017410/1-644 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000003767/1-645 ---------- ---------- ---------- ---------- ---------- bmy_00108T0/1-646 ---------- ---------- ---------- ---------- ---------- BACU010507/1-1345 TEALPLAITA FLPTVLFPMM GIMGASVVST EYLKDTNILF IGGMLVALAV 101 150 ENSP00000226247/1-648 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000017410/1-644 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000003767/1-645 ---------- ---------- ---------- ---------- ---------- bmy_00108T0/1-646 ---------- ---------- ---------- ---------- ---------- BACU010507/1-1345 EHWNLHKRIA LRVLLIIGVR PSLLILGFMV VTAFLSMWIS NTATTAMMVP 151 200 ENSP00000226247/1-648 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000017410/1-644 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000003767/1-645 ---------- ---------- ---------- ---------- ---------- bmy_00108T0/1-646 ---------- ---------- ---------- ---------- ---------- BACU010507/1-1345 IAHAVLEQLH KVPKSKDVEE GENNPAFELQ EPSPQKEETK LDEKDNKQDG 201 250 ENSP00000226247/1-648 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000017410/1-644 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000003767/1-645 ---------- ---------- ---------- ---------- ---------- bmy_00108T0/1-646 ---------- ---------- ---------- ---------- ---------- BACU010507/1-1345 PAPPVPSEPK AQQDEEQLRF TRGMSLCVCY SASIGGIATL TGTTTNLVLQ 251 300 ENSP00000226247/1-648 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000017410/1-644 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000003767/1-645 ---------- ---------- ---------- ---------- ---------- bmy_00108T0/1-646 ---------- ---------- ---------- ---------- ---------- BACU010507/1-1345 GQVNSLFPEN DNVVNFASWF AFAFPTMVIL LLLSWVWLQF LFLGFNFRKN 301 350 ENSP00000226247/1-648 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000017410/1-644 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000003767/1-645 ---------- ---------- ---------- ---------- ---------- bmy_00108T0/1-646 ---------- ---------- ---------- ---------- ---------- BACU010507/1-1345 CGLGDEMRER ERAAFEVIRR EHKLLGPMTF AEKAVSTLFV LLVVLWFTRE 351 400 ENSP00000226247/1-648 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000017410/1-644 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000003767/1-645 ---------- ---------- ---------- ---------- ---------- bmy_00108T0/1-646 ---------- ---------- ---------- ---------- ---------- BACU010507/1-1345 PGFFTGWGNL AFSDEDGKSM PSDGTVAILI AVILFIMPSK IPGLTQEPGK 401 450 ENSP00000226247/1-648 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000017410/1-644 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000003767/1-645 ---------- ---------- ---------- ---------- ---------- bmy_00108T0/1-646 ---------- ---------- ---------- ---------- ---------- BACU010507/1-1345 PGKLKAPPAL LNWKIVKEKM PWNIVLLLGG GFALAKGSEE SGLSKWLGDK 451 500 ENSP00000226247/1-648 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000017410/1-644 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000003767/1-645 ---------- ---------- ---------- ---------- ---------- bmy_00108T0/1-646 ---------- ---------- ---------- ---------- ---------- BACU010507/1-1345 LTPLESVPPP AIAFILCLLI ATFTECTSNV ATTTIFLPIL ASMSQAICIH 501 550 ENSP00000226247/1-648 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000017410/1-644 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000003767/1-645 ---------- ---------- ---------- ---------- ---------- bmy_00108T0/1-646 ---------- ---------- ---------- ---------- ---------- BACU010507/1-1345 PLYVMLPCTL SSSLAFMLPV ATPPNAIAFS FGGLKVTHMA QAGFMLNILG 551 600 ENSP00000226247/1-648 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000017410/1-644 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000003767/1-645 ---------- ---------- ---------- ---------- ---------- bmy_00108T0/1-646 ---------- ---------- ---------- ---------- ---------- BACU010507/1-1345 VLVITLAINT WSIPMFDLHS FPSWAQSNTT GFCGVSQANI TTPSPYTTTK 601 650 ENSP00000226247/1-648 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000017410/1-644 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000003767/1-645 ---------- ---------- ---------- ---------- ---------- bmy_00108T0/1-646 ---------- ---------- ---------- ---------- ---------- BACU010507/1-1345 KSPNVLVYST LVPDDHQDVP AKVDITSLLG MRQSCLTSVL LAVACPNFIL 651 700 ENSP00000226247/1-648 ---------- ---------- ---------- ---------- ---------M ENSBTAP00000017410/1-644 ---------- ---------- ---------- ---------- ---------M ENSTTRP00000003767/1-645 ---------- ---------- ---------- ---------- ---------M bmy_00108T0/1-646 ---------- ---------- ---------- ---------- ---------M BACU010507/1-1345 IPNSIFPSHT IPPPQDGSLH TPEIPFGGQH PSSVPPPGPA GFLRGQDWVM 701 750 ENSP00000226247/1-648 VSLPPPQSDV TLPGPTRLEG ERQGDLMQAP GLPGSPAPQS KHAGFSCSSF ENSBTAP00000017410/1-644 VSLLPPQSDV TLPGPARLEG EPQGDFMQAP GLPGSPAPQN KHAGFSCSSF ENSTTRP00000003767/1-645 VSQLQQQSDV TLPGPTRLEG EPQGDHMQAP GIPGSHATQN KHAGFSCSSF bmy_00108T0/1-646 VSLLLPQSDV TLPGPTRLEG EPQGDHMQAP GLPGSPAPQN KHAGFSCSSF BACU010507/1-1345 VSLLLPQSDV TLPGPTRLEG EPQGDHMQAP GLPGSPAPQN KHAGFSCSSF 751 800 ENSP00000226247/1-648 VSDGPPERTP SLPPHSPRIA SPGPEQVQGH CPAGPGPGPF RLSPSDKYPG ENSBTAP00000017410/1-644 VPDGPPERES SLPPHSPSIA SPGPEQV--H CPAGPGPGPF RLSPSDKYPG ENSTTRP00000003767/1-645 VPDGPPERAP SLPPHSPCAA SPGPEQV--H CPAGPGLGPF RLSPSDKYPG bmy_00108T0/1-646 VPDGPPERAP SLPPHSPCAA SPGPEQV--H CPAGPGLGPF RLSPSDKYPG BACU010507/1-1345 VPDGPPERAP SLPPHSPCAA SPGPEQV--H CPAGPGLGPF RLSPSDKYPG 801 850 ENSP00000226247/1-648 FGFEEAAASS PGRFLKGSHA PFHPYKRPFH EDVFPEAETT LALKGHSFKT ENSBTAP00000017410/1-644 FSFEEGPASG PGRFLKGSHV PFHPYKRHFH EDVFPEAQTA LALDGHSFKT ENSTTRP00000003767/1-645 FGFEEGPASS PGRFLKGSHV PFHPYKRHFH DDVFPEAQTA LALAGHSFKT bmy_00108T0/1-646 FGFEEGPASS PGRFLKGSHV PFHPYQRHFH DDVFPEAQTA LALTGHSFKT BACU010507/1-1345 FGFEEGPASS PGRFLKGSHV PFHPYQRHFH DDVFPEAQTA LALAGHSFKT 851 900 ENSP00000226247/1-648 PGPLEAFEEI PVDVAEAEAF LPGFSAEAWC NGLPYPSQEH GPQVL-GSEV ENSBTAP00000017410/1-644 PGALEAFEEI PADVGEAEAF LPGFPAEVWC NGLPYPSQEH SPQVL-GSEV ENSTTRP00000003767/1-645 PGALEAFEEI PTDVGEREAF LPGFPAEAWC NGLPYPSREH SPQVL-ESEV bmy_00108T0/1-646 PGALEAFEEI PTDVGEREAF LPGFPAEAWC NGLPYPSREH SPQVLQGSEV BACU010507/1-1345 PGALEAFEEI PTDVGEREAF LSGFPAEAWC NGLPYPSREH SPQVLQGSEV 901 950 ENSP00000226247/1-648 KVKPPVLESG AGMFCYQPPL QHMYCSSQPP FHQYSPGGGS YPIPYLGSSH ENSBTAP00000017410/1-644 KVKPPALESG PGMYCYQPPL QHMYCPTQPP FHQYSPGGSS YPVPYLGSSH ENSTTRP00000003767/1-645 EVKPPPLESG PGMYCYQPPL QHMYCPSQPP FHQYSPGGSS YPVPYLGSSY bmy_00108T0/1-646 KVKPPPLESG PGMYCYQPPL QHMYCPSQPP FHQYSPGGSS YPVPYLGSSH BACU010507/1-1345 KVKPPPLESG PGMYCYQPPL QHMYCPSQPP FHQYSPGGSS YPVPYLGSSH 951 1000 ENSP00000226247/1-648 YQYQRMAPQA STDGHQPLFP KPIYSYSILI FMALKNSKTG SLPVSEIYNF ENSBTAP00000017410/1-644 YPYQRIAPQA STDGHQPLFP KPIYSYSILI FMALKNSKTG SLPVSEIYNF ENSTTRP00000003767/1-645 YPYQRIAPQA STDGHQPLFP KPIYSYSILI FMALKNSKTG SLPVSEIYNF bmy_00108T0/1-646 YPYQRIAPQA STDGHQPLFP KPIYSYSILI FMALKNSKTG SLPVSEIYNF BACU010507/1-1345 YPYQRIAPQA STDGHQPLFP KPIYSYSILI FMALKNSKTG SLPVSEIYNF 1001 1050 ENSP00000226247/1-648 MTEHFPYFKT APDGWKNSVR HNLSLNKCFE KVENKSGSSS RKGCLWALNP ENSBTAP00000017410/1-644 MTEHFPYFKT APDGWKNSVR HNLSLNKCFE KVENKSGSSS RKGCLWALNP ENSTTRP00000003767/1-645 MTEHFPYFKT APDGWKNSVR HNLSLNKCFE KVENKSGSSS RKGCLWALNP bmy_00108T0/1-646 MTEHFPYFKT APDGWKNSVR HNLSLNKCFE KVENKSGSSS RKGCLWALNP BACU010507/1-1345 MTEHFPYFKT APDGWKNSVR HNLSLNKCFE KVENKSGSSS RKGCLWALNP 1051 1100 ENSP00000226247/1-648 AKIDKMQEEL QKWKRKDPIA VRKSMAKPEE LDSLIGDKRE KLGSPLLGCP ENSBTAP00000017410/1-644 AKIDKMQEEL QKWKRKDPIA VRKSMAKPEE LDSLIGDKRE KLGSPLLGCP ENSTTRP00000003767/1-645 AKIDKMQEEL QKWKRKDPIA VRKSMAKPEE LDSLIGDKRE KLGSPLLGCP bmy_00108T0/1-646 AKIDKMQEEL QKWKRKDPIA VRKSMAKPEE LDSLIGDKRE KLGSPLLGCP BACU010507/1-1345 AKIDKMQEEL QKWKRKDPIA VRKSMAKPEE LDSLIGDKRE KLGSPLLGCP 1101 1150 ENSP00000226247/1-648 PPGLSGSGPI RPLAPPAGLS PPLHSLHPAP GPIPGKNPLQ DLLMGHTPSC ENSBTAP00000017410/1-644 PPGLAGSGPI QPLAPPAGLS QPLHSIHPAP GPIPGKNPLQ DLLGGHAPSC ENSTTRP00000003767/1-645 APGLAGSGSV RPLPPPAGFS QPLQSVHPAP GPIRGKNPLQ DLLGGHAPSF bmy_00108T0/1-646 PPGLAGSGPI RPLAPPAGFS QPLHSIHPAP GPIPGKNPLQ DLLGGHAPSC BACU010507/1-1345 PPGLAGSGPI RPLAPPAGFS QPLHSIHPAP GPIPGKNPLQ DLLGGHAPSC 1151 1200 ENSP00000226247/1-648 YGQTYLHLSP GLAPPGPPQP LFPQPDGHLE LRAQPGTPQD SPLPAHTPPS ENSBTAP00000017410/1-644 YGQTYSHLSP GLAPPGPPQP LFPQPDGHLE LRAQPGTPQD SPLPAHTPPS ENSTTRP00000003767/1-645 YGQTYSHLSP GLAPPGPLQP LFPQPDGHLE LRAQPGTPQD SPLPAHTPPS bmy_00108T0/1-646 YGQTYSHLSP GLAPPGPPQP LFPQPDGHLE LRAQPGTPQD SPLPAHTPPS BACU010507/1-1345 YGQTYSHLSP GLAPPGPPQP LFPQPDGHLE LRAQPGTPQD SPLPAHTPPS 1201 1250 ENSP00000226247/1-648 HSAKLLAEPS PARTMHDTLL PDGDLGTDLD AINPSLTDFD FQGNLWEQLK ENSBTAP00000017410/1-644 HSAKLLAEPS PARTMHDTLL PDGDLGTDLD AINPSLTDFD FQGNLWEQLK ENSTTRP00000003767/1-645 HSAKLLAEPS PARTIHETLL PDGDLGTDLD AINPSLTDFD FQGNLWEQLK bmy_00108T0/1-646 HSAKLLAEPS PARTIHETLL PDGDLGTDLD AINPSLTDFD FQGNLWEQLK BACU010507/1-1345 HSAKLLAEPS PARTIHETLL PDGDLGTDLD AINPSLTDFD FQGNLWEQLK 1251 1300 ENSP00000226247/1-648 DDSLALDPLV LVTSSPTSSS MPPPQPP--P HCFPPGPCLT ETGSGAGDLA ENSBTAP00000017410/1-644 DDSLALDPLV LVTSSPTSSS VPPAPPP--- -CYPPGPCLA ETGSGTGDLA ENSTTRP00000003767/1-645 DDSLALDPLV LVTSPLTSSS MLPPQPPSPS HCFPPGPCLA ETGSGAGDLT bmy_00108T0/1-646 DDSLALDPLV LVTSPLTSSS MPPPHPPSPS RCFPPGPCLA ETGSGAGDLT BACU010507/1-1345 DDSLALDPLV LVTSPLTSSS MPPPHPPSPS RCFPPGPCLA ETGSGAGDLT 1301 1350 ENSP00000226247/1-648 APGSGGSGAL GDLHLTTLYS AFMELEPTPP TAPAGPSVYL SPSSKPVALA ENSBTAP00000017410/1-644 PPGNGGSGAL GDLHLTTLYS AFMELEPTPS AAPTGPSVYL SPSSKPMALA ENSTTRP00000003767/1-645 PPGNGASGAV GDLHLTTLYS AFMELEPM-- -APAGPSVYL SPSSKPMALA bmy_00108T0/1-646 PPGNGGSGAV GDLHLTTLYS AFMELEPT-- -APAGPCVYL SPSSKPMALA BACU010507/1-1345 PPGNGGSGAV GDLHLTTLYS AFMELEPT-- -APAGPCVYL SPSSKPMALA