KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:01:30 2014 Check: 00 .. Name: ENSTTRP00000004531/1-298 Len: 299 Check: 434 Weight: 1.00 Name: bmy_11475T0/1-258 Len: 299 Check: 1841 Weight: 1.00 Name: ENSP00000441875/1-299 Len: 299 Check: 309 Weight: 1.00 Name: ENSBTAP00000017442/1-299 Len: 299 Check: 145 Weight: 1.00 Name: BACU003065/1-286 Len: 299 Check: 3334 Weight: 1.00 // 1 50 ENSTTRP00000004531/1-298 MAQNLKDLAG RLPSGPRGMG TAL-LLLGAG AVAYGVRESV FTXXXXXXXX bmy_11475T0/1-258 MAQNLKDLAG RLPSGPRGMG TALKLLLGAG AVAYGVRESV FTVEGGQRAI ENSP00000441875/1-299 MAQNLKDLAG RLPAGPRGMG TALKLLLGAG AVAYGVRESV FTVEGGHRAI ENSBTAP00000017442/1-299 MAQNLKDLAG RLPSGPRGMG TALKLLLGAG AVAYGIRESV FTVEGGHRAI BACU003065/1-286 MAQNLKDLAG RLPSGPRGMG TALKLLLGAG AVAYGVRESV FTVEGGQRAI 51 100 ENSTTRP00000004531/1-298 XXXXXXXXXX XXXXXXXXXX XIPWFQYPII YDIRARPRKI SSPTGSKDLQ bmy_11475T0/1-258 FFNRIGGVQQ DTILAEGLHF RIPWFQYPII YDIRARPRKI SSPTGSKDLQ ENSP00000441875/1-299 FFNRIGGVQQ DTILAEGLHF RIPWFQYPII YDIRARPRKI SSPTGSKDLQ ENSBTAP00000017442/1-299 FFNRIGGVQQ DTILAEGLHF RIPWFQYPII YDIRARPRKI SSPTGSKDLQ BACU003065/1-286 FFNRIGGVQQ DTILAEGLHF RIPWFQYPII YDIRARPRKI SSPTGSKDLQ 101 150 ENSTTRP00000004531/1-298 MVNISLRVLS RPNAAELPSM YQRLGLDYEE RVLPSIVNEV LKSVVAKFNA bmy_11475T0/1-258 MVNISLRVLS RPNALELPSM YQRLGLDYEE RVLPSIVNEV LKSVVAKFNA ENSP00000441875/1-299 MVNISLRVLS RPNAQELPSM YQRLGLDYEE RVLPSIVNEV LKSVVAKFNA ENSBTAP00000017442/1-299 MVNISLRVLS RPNAMELPSM YQRLGLDYEE RVLPSIVNEV LKSVVAKFNA BACU003065/1-286 MVNISLRVLS RPNALELPSM YQRLGLDYEE RVLPSIVNEV LKSVVAKFNA 151 200 ENSTTRP00000004531/1-298 SQLITQRAQV SLLIRRELTE RAKDFSLILD DVAITELSFS REYTAAVEAK bmy_11475T0/1-258 SQLITQRAQV SLLIRRELTE RAKDFSLILD DVAITELSFS REYTAAVEAK ENSP00000441875/1-299 SQLITQRAQV SLLIRRELTE RAKDFSLILD DVAITELSFS REYTAAVEAK ENSBTAP00000017442/1-299 SQLITQRAQV SLLIRRELTE RAKDFSLILD DVAITELSFS REYTAAVEAK BACU003065/1-286 SQLITQRAQV SLLIRRELTE RAKDFSLILD DVAITELSFS REYTAAVEAK 201 250 ENSTTRP00000004531/1-298 QVAQQEAQRA QFLVEKAKQE QRQKIVQAEG EAEAAKMLGE ALGKNPGYIK bmy_11475T0/1-258 QVAQQEAQRA QFLVEKAKQE QRQKIVQA-- ---------E ALGKNPGYIK ENSP00000441875/1-299 QVAQQEAQRA QFLVEKAKQE QRQKIVQAEG EAEAAKMLGE ALSKNPGYIK ENSBTAP00000017442/1-299 QVAQQEAQRA QFLVEKAKQE QRQKIVQAEG EAEAARMLGE ALSKNPGYIK BACU003065/1-286 QVAQQEAQRA QFLVEKAKQE QRQKIVQA-- ---------E ALGKNPGYIK 251 300 ENSTTRP00000004531/1-298 LRKIRAAQNI SKTIATSQNR VFLTADNLVL NLQDESFTRY SDSLIKGKK bmy_11475T0/1-258 LRKIRAAQNI SKTPFSDED- ---------- ---------- --------- ENSP00000441875/1-299 LRKIRAAQNI SKTIATSQNR IYLTADNLVL NLQDESFTRG SDSLIKGKK ENSBTAP00000017442/1-299 LRKIRAAQNI SKTIATSQNR IYLTADNLVL NLQDESFTRG SDSLIKGKK BACU003065/1-286 LRKIRAAQNI SKTIATSQNR IYLTADNLVL NLQDESFTR- -DSLIKGKK