KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:01:32 2014 Check: 00 .. Name: BACU001659/1-77 Len: 528 Check: 6853 Weight: 1.00 Name: ENSP00000355777/1-528 Len: 528 Check: 3536 Weight: 1.00 Name: ENSBTAP00000017450/1-528 Len: 528 Check: 1684 Weight: 1.00 Name: bmy_10519T0/1-438 Len: 528 Check: 5247 Weight: 1.00 Name: ENSTTRP00000004479/1-436 Len: 528 Check: 8973 Weight: 1.00 // 1 50 BACU001659/1-77 ---------- ---------- ---------- ---------- ---------- ENSP00000355777/1-528 MAAVLNAERL EVSVDGLTLS PDPEERPGAE GAPLLPPPLP PPSPPGSGRG ENSBTAP00000017450/1-528 MAAVLSAERL EVSVDGLTLS PDPEERPGAE GAPLLPPPLP PPSPPGSGRG bmy_10519T0/1-438 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004479/1-436 ---------- ---------- ---------- ---------- ---------- 51 100 BACU001659/1-77 ---------- ---------- ---------- ---------- ---------- ENSP00000355777/1-528 PGASGEQPEP GEAAAGGAAE EARRLEQRWG FGLEELYGLA LRFFKEKDGK ENSBTAP00000017450/1-528 PGAAGEQPEP GEAVAGGAAE EARRLEQRWG FGLEELYGLA LRFFKEKDGK bmy_10519T0/1-438 ---------- ---------- ---------- ---------- MQIEVQKDGK ENSTTRP00000004479/1-436 ---------- ---------- ---------- ---------- --FFKEKDGK 101 150 BACU001659/1-77 ---------- ---------- ---------- ---------- ---------- ENSP00000355777/1-528 AFHPTYEEKL KLVALHKQVL MGPYNPDTCP EVGFFDVLGN DRRREWAALG ENSBTAP00000017450/1-528 AFHPTYEEKL KLVALHKQVL MGPYNPDTCP EVGFFDVLGN DRRREWAALG bmy_10519T0/1-438 AFHPTYEEKL KLVALHKQVL MGPYNPDTCP EVGFFDVLGN DRRREWAALG ENSTTRP00000004479/1-436 AFHPTYEEKL KLVALPKQVL MGPYNPDTCP EVGFFDVLGN DRRREWAALG 151 200 BACU001659/1-77 ---------- -------MSP FFLT------ ---------- ---------- ENSP00000355777/1-528 NMSKEDAMVE FVKLLNRCCH LFSTYVASHK IEKEEQEKKR KEEEERRRRE ENSBTAP00000017450/1-528 NMSKEDAMVE FVKLLNRCCH LFSTYVASHK IEKEEQEKKR KEEEERRRRE bmy_10519T0/1-438 NMSKEDAMVE FVKLLNRCCH LFSTYVASHK IEKEEQEKKR KEEEERRRRE ENSTTRP00000004479/1-436 NMSKEDAMVE FVKLLNRCCH LFSTYVASHK IEKEEQEKKR KEEEERRRRE 201 250 BACU001659/1-77 ---------- ---------- ---------- ---------- ---------- ENSP00000355777/1-528 EEERERLQKE EEKRRREEEE RLRREEEERR RIEEERLRLE QQKQQIMAAL ENSBTAP00000017450/1-528 EEERERLQKE EEKRRREEEE RLRREEEERR RLEEERLRLE QQKQQIMAAL bmy_10519T0/1-438 EEERERLQKE EEKRRQEEEE RLRREEEERR RIEEERLRLE QQKQQIMAAL ENSTTRP00000004479/1-436 EEERERLQKE EEKRRQEEEE RLRREEEERR RIEEERLRLE QQKQQIMAAL 251 300 BACU001659/1-77 ---------- ---------- ---------- ---------- ---------- ENSP00000355777/1-528 NSQTAVQFQQ YAAQQYPGNY EQQQILIRQL QEQHYQQYMQ QLYQVQLAQQ ENSBTAP00000017450/1-528 NSQTAVQFQQ YAAQQYPGNY EQQQILIRQL QEQHYQQYMQ QLYQVQLAQQ bmy_10519T0/1-438 NSQTAVQFQQ YAAQQYPGNY EQQQLLIRQL QEQHYQQYMQ QLYQVQLAQQ ENSTTRP00000004479/1-436 NSQTAVQFQQ YAAQQYPGNY EQQQILIRQL QEQHYQQYMQ QLYQVQLAQQ 301 350 BACU001659/1-77 ---------- ---------- ---------- ---------- ---------- ENSP00000355777/1-528 QAALQKQQEV VVAGSSLPTS SKVNATVPSN MMSVNGQAKT HTDSSEKELE ENSBTAP00000017450/1-528 QAALQKQQEV AVAGASSPTS SKVNATTPSD MMSVNGQAKT HTDNTEKETK bmy_10519T0/1-438 QAALQKQQEV AVAGASLPTS SKVNTTTPSD MMSVNGQAKT HTDNSEKELE ENSTTRP00000004479/1-436 QAALQKQQEV AVAGASLPTS SKVNTTTPSD MMSVNGQAKT HTDNSEKELE 351 400 BACU001659/1-77 ---------- ---------- ---------- ---------- ---------- ENSP00000355777/1-528 PEAAEEALEN GPKESLPVIA APSMWTRPQI KDFKEKIQQD ADSVITVGRG ENSBTAP00000017450/1-528 PEAAEEALEN GPKESLPVIA APSMWTRPQI KDFKEKIRQD ADSVITVGRG bmy_10519T0/1-438 PEAAEEALEN GPKESLPVIA APSMWTRPQI KDFKEKIRQD ADSVITVGRG ENSTTRP00000004479/1-436 PEAAEEALEN GPKESLPVIA APSMWTRPQI KDFKEKIRQD ADSVITVGRG 401 450 BACU001659/1-77 ---------- ---------- ---------- ---------- ---------- ENSP00000355777/1-528 EVVTVRVPTH EEGSYLFWEF ATDNYDIGFG VYFEWTDSPN TAVSVHVSES ENSBTAP00000017450/1-528 EVVTVRVPTH EEGSYLFWEF ATDNYDIGFG VYFEWTDSPN TAVSVHVSES bmy_10519T0/1-438 EVVTVRVPTH EEGSYLFWEF ATDNYDIGFG VYFEWTDSPN TAVSVHVSES ENSTTRP00000004479/1-436 EVVTVRVPTH EEGSYLFWEF ATDNYDIGFG VYFEWTDSPN TAVSVHVSES 451 500 BACU001659/1-77 --------EN ISSEEKAKKN ANKPLLDEIV PVYRRDCHEE VYAGSHQYPG ENSP00000355777/1-528 SDDDEEEEEN IGCEEKAKKN ANKPLLDEIV PVYRRDCHEE VYAGSHQYPG ENSBTAP00000017450/1-528 SDDDEEEEEN ISSEEKAKKN ANKPLLDEIV PVYRRDCHEE VYAGSHQYPG bmy_10519T0/1-438 SDDDEEEEEN ISSEEKAKKN ANKPLLDEIV PVYRRDCHEE VYAGSHQYPG ENSTTRP00000004479/1-436 SDDDEEEEEN ISSEEKAKKN ANKPLLDEIV PVYRRDCHEE VYAGSHQYPG 501 550 BACU001659/1-77 RGVYLLKFDN SYSLWRSKSV YYRVYYTR ENSP00000355777/1-528 RGVYLLKFDN SYSLWRSKSV YYRVYYTR ENSBTAP00000017450/1-528 RGVYLLKFDN SYSLWRSKSV YYRVYYTR bmy_10519T0/1-438 RGVYLLKFDN SYSLWRSKSV YYRVYYTR ENSTTRP00000004479/1-436 RGVYLLKFDN SYSLWRSKSV YYRVYYTR