KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:01:34 2014 Check: 00 .. Name: ENSP00000333037/1-372 Len: 372 Check: 2599 Weight: 1.00 Name: ENSBTAP00000017467/1-368 Len: 372 Check: 8749 Weight: 1.00 Name: bmy_21670T0/1-372 Len: 372 Check: 6250 Weight: 1.00 Name: ENSTTRP00000001765/1-361 Len: 372 Check: 6967 Weight: 1.00 // 1 50 ENSP00000333037/1-372 MNHCQLPVVI DNGSGMIKAG VAGCREPQFI YPNIIGRAKG QSRAAQGGLE ENSBTAP00000017467/1-368 MSYYQLPVVI DNGSGVIKAG LAGSREPQFV YSNIVGRTKG LTCGV----E bmy_21670T0/1-372 MSYYQLPVVI DNGSGVIKAG LAGSREPQFV YPNIIGRAKG QTWGSEGAQE ENSTTRP00000001765/1-361 MSYYQLPVVI DNGSGVIKAG LAGSREPQFV YPNFIGRAKG QTWGAEGAQE 51 100 ENSP00000333037/1-372 LCVGDQAQDW RSSLFISYPV ERGLITSWED MEIMWKHIYD YNLKLKPCDG ENSBTAP00000017467/1-368 VCVGDQAEQR RSSLSISYPV ERGLITSWGD MEIMWKHIYD DNLRLKPCDG bmy_21670T0/1-372 VCVGDQAQHR RSSLSVSYPV ERGLITCWGD MEIMWKHIYD DNLKLKPCDG ENSTTRP00000001765/1-361 VCVGDQ---- -------YPV ERGLITCWGD MEIMWKHIYD DNLKLKPCDG 101 150 ENSP00000333037/1-372 PVLITEPALN PLANRQQITE MFFEHLGVPA FYMSIQAVLA LFAAGFTTGL ENSBTAP00000017467/1-368 PVLITESALN PLANRQRVTE VFFEYLEVPA FFMSVQGVLA LFAAGFTTGF bmy_21670T0/1-372 PVLITESALN PLANRQRVTE EFFEHLEVPA FYMSIQGVLA LFAAGFTTGF ENSTTRP00000001765/1-361 PVLITESALN SLANRQRVTE VFFEHLEVPA FYMSIQGVLA LFATGLTTGF 151 200 ENSP00000333037/1-372 VLNSGAGVTQ SVPIFEGYCL PHGVQQLDLA GLDLTNYLMV LMKNHGIMLL ENSBTAP00000017467/1-368 VLNSGAGVTQ CVPIFEGYCL PHGVQQLDLA GLDLTNYLMM LLKENGIMLL bmy_21670T0/1-372 VLNSGAGVTQ CVPIFEGYCL PHSVQQLDLA GLDLTNYLMR LLKEHGIMLL ENSTTRP00000001765/1-361 VLNSGAGVTQ CVPIFEGYCL PHSVQQLDLA GLDLTNYLMM LLKEHGIMLL 201 250 ENSP00000333037/1-372 SASDRKIVED IKESFCYVAM NYEEEMAKKP DCLEKVYQLP DGKVIQLHDQ ENSBTAP00000017467/1-368 RTSERKIITD IKETYCYVAM NFEEEKAKKA DCIEKIYQLP DGKRFKLHNQ bmy_21670T0/1-372 SASERKIVTD IKENYCYVAM NFEEEKAKKA DCIEKVYQLP DGKTLKLHDQ ENSTTRP00000001765/1-361 SASDRKIVTD IKETYCYVAM NFEEEKAKKA DCIEKVYQLP DGKTIKLHDQ 251 300 ENSP00000333037/1-372 LFSCPEALFS PCHMNLEAPG IDKICFSSIM KCDTGLRNSF FSNIILAGGS ENSBTAP00000017467/1-368 LFYCPEALFS PSLMHLETPG IDKMCFSSIM KCDADLRNAF FSNIILAGGS bmy_21670T0/1-372 LFHCPEALFS PSLMHLETPG IDKMCFSSIM KCDTDLRNSF FSNIILAGGS ENSTTRP00000001765/1-361 LFHCPEALFS PSLLHLETPG IDKMCFSSIM KCDTDLRNSF FSNIILAGGS 301 350 ENSP00000333037/1-372 TSFPGLDKRL VKDIAKVAPA NTAVQVIAPP ERKISVWMGG SILASLSAFQ ENSBTAP00000017467/1-368 TSFPGLEKRL VKDIAKMVPA NTPVQVIAPP ERKISVWMGG SILASLSAFQ bmy_21670T0/1-372 TSFPGLDKRL VKDIAKVVPA NTPVQVIAPP ERRISVWMGG SVLASLSAFQ ENSTTRP00000001765/1-361 TSFPGLDKRL VKDIAKVVPA NTPVQVIAPP ERKISVWVGG SILASLSAFQ 351 400 ENSP00000333037/1-372 DMWITAAEFK EVGPNIVHQR CF ENSBTAP00000017467/1-368 DMWITAAEYK EVGSNIVHQR CF bmy_21670T0/1-372 DMWITAAEFK EVGPNIVHQR CF ENSTTRP00000001765/1-361 HMWITAAEFK EVGPNIVHQR CF