KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:01:35 2014 Check: 00 .. Name: ENSTTRP00000001519/1-432 Len: 492 Check: 6583 Weight: 1.00 Name: bmy_06578T0/1-492 Len: 492 Check: 1811 Weight: 1.00 Name: ENSP00000263257/1-492 Len: 492 Check: 1811 Weight: 1.00 Name: ENSBTAP00000017485/1-464 Len: 492 Check: 2828 Weight: 1.00 // 1 50 ENSTTRP00000001519/1-432 IEPEAPDSRK RPLDTPPEVV CSKRSITGEE GEYFLKVLIP SYAAGSIIGK bmy_06578T0/1-492 MEPEAPDSRK RPLETPPEVV CTKRSNTGEE GEYFLKVLIP SYAAGSIIGK ENSP00000263257/1-492 MEPEAPDSRK RPLETPPEVV CTKRSNTGEE GEYFLKVLIP SYAAGSIIGK ENSBTAP00000017485/1-464 ---------- ---------- --------EE GEYFLKVLIP SYAAGSIIGK 51 100 ENSTTRP00000001519/1-432 GGQTIVQLQK ETGATIKLSK SKDFYPGTTE RVCLVQGTAE ALNAVHSFIA bmy_06578T0/1-492 GGQTIVQLQK ETGATIKLSK SKDFYPGTTE RVCLVQGTAE ALNAVHSFIA ENSP00000263257/1-492 GGQTIVQLQK ETGATIKLSK SKDFYPGTTE RVCLVQGTAE ALNAVHSFIA ENSBTAP00000017485/1-464 GGQTIVQLQK ETGATIKLSK SKDFYPGTTE RVCLVQGTAE ALNAVHSFIA 101 150 ENSTTRP00000001519/1-432 EKVREIPQAM TKPEVVNILQ PQTTMNPDRA KQAKLIVPNS TAGLIIGKGG bmy_06578T0/1-492 EKVREIPQAM TKPEVVNILQ PQTTMNPDRA KQAKLIVPNS TAGLIIGKGG ENSP00000263257/1-492 EKVREIPQAM TKPEVVNILQ PQTTMNPDRA KQAKLIVPNS TAGLIIGKGG ENSBTAP00000017485/1-464 EKVREIPQAM TKPEVVNILQ PQTTMNPDRA KQAKLIVPNS TAGLIIGKGG 151 200 ENSTTRP00000001519/1-432 ATVKAVMEQS GAWVQLSQKP EGINLQERVV TVSGEPEQVH KAVSAIVQKV bmy_06578T0/1-492 ATVKAVMEQS GAWVQLSQKP EGINLQERVV TVSGEPEQVH KAVSAIVQKV ENSP00000263257/1-492 ATVKAVMEQS GAWVQLSQKP EGINLQERVV TVSGEPEQVH KAVSAIVQKV ENSBTAP00000017485/1-464 ATVKAVMEQS GAWVQLSQKP EGINLQERVV TVSGEPEQVH KAVSAIVQKV 201 250 ENSTTRP00000001519/1-432 QEDPQSSSCL NISYANVAGP VANSNPTGSP YASPADVLPA AAAASAAAAS bmy_06578T0/1-492 QEDPQSSSCL NISYANVAGP VANSNPTGSP YASPADVLPA AAAASAAAAS ENSP00000263257/1-492 QEDPQSSSCL NISYANVAGP VANSNPTGSP YASPADVLPA AAAASAAAAS ENSBTAP00000017485/1-464 QEDPQSSSCL NISYANVAGP VANSNPTGSP YASPADVLPA AAAASAAAAS 251 300 ENSTTRP00000001519/1-432 GLLGPAGLAG VGAFPAALPA FSGTDLLAIS TALNTLASYG YNTNSLGLGL bmy_06578T0/1-492 GLLGPAGLAG VGAFPAALPA FSGTDLLAIS TALNTLASYG YNTNSLGLGL ENSP00000263257/1-492 GLLGPAGLAG VGAFPAALPA FSGTDLLAIS TALNTLASYG YNTNSLGLGL ENSBTAP00000017485/1-464 GLLGPAGLAG VGAFPAALPA FSGTDLLAIS TALNTLASYG YNTNSLGLGL 301 350 ENSTTRP00000001519/1-432 NSAAASGVLA AVAAGANPAA AAAANLLASY AGEAGAGPAG GAAPPPPPPP bmy_06578T0/1-492 NSAAASGVLA AVAAGANPAA AAAANLLASY AGEAGAGPAG GAAPPPPPPP ENSP00000263257/1-492 NSAAASGVLA AVAAGANPAA AAAANLLASY AGEAGAGPAG GAAPPPPPPP ENSBTAP00000017485/1-464 NSAAASGVLA AVAAGANPAA AAAANLLASY AGEAGAGPAG GAAPPPPPPP 351 400 ENSTTRP00000001519/1-432 GALGSFALAA AANGYLGAGA GGGAGGGGGP LVAAAAAAGA AGGFLTAEKL bmy_06578T0/1-492 GALGSFALAA AANGYLGAGA GGGAGGGGGP LVAAAAAAGA AGGFLTAEKL ENSP00000263257/1-492 GALGSFALAA AANGYLGAGA GGGAGGGGGP LVAAAAAAGA AGGFLTAEKL ENSBTAP00000017485/1-464 GALGSFALAA AANGYLGAGA GGGAGGGGGP LVAAAAAAGA AGGFLTAEKL 401 450 ENSTTRP00000001519/1-432 AAESAKELVE I-VPE--LGA ILST-GQTLV EYQELT---- ---------- bmy_06578T0/1-492 AAESAKELVE IAVPENLVGA ILGKGGKTLV EYQELTGARI QISKKGEFLP ENSP00000263257/1-492 AAESAKELVE IAVPENLVGA ILGKGGKTLV EYQELTGARI QISKKGEFLP ENSBTAP00000017485/1-464 AAESAKELVE IAVPENLVGA ILGKGGKTLV EYQELTGARI QISKKGEFLP 451 500 ENSTTRP00000001519/1-432 ---------- ---------- ---------- ---------- -- bmy_06578T0/1-492 GTRNRRVTIT GSPAATQAAQ YLISQRVTYE QGVRASNPQK VG ENSP00000263257/1-492 GTRNRRVTIT GSPAATQAAQ YLISQRVTYE QGVRASNPQK VG ENSBTAP00000017485/1-464 GTRNRRVTIT GSPAATQAAQ YLISQRVTYE QGVRASNPQK VG