KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:01:42 2014 Check: 00 .. Name: ENSP00000364126/1-518 Len: 561 Check: 6994 Weight: 1.00 Name: ENSBTAP00000017537/1-514 Len: 561 Check: 8293 Weight: 1.00 Name: ENSTTRP00000004425/1-515 Len: 561 Check: 6558 Weight: 1.00 Name: bmy_18317T0/1-547 Len: 561 Check: 3888 Weight: 1.00 Name: BACU012647/1-515 Len: 561 Check: 7203 Weight: 1.00 // 1 50 ENSP00000364126/1-518 ---------- ---------- ---------- ---------- ---MLRVVSW ENSBTAP00000017537/1-514 ---------- ---------- ---------- ---------- ---MLRLVSW ENSTTRP00000004425/1-515 ---------- ---------- ---------- ---------- ---MLRVVSW bmy_18317T0/1-547 LRHAQERLRK CARGRPGLAD LVFGFLLAPT WGAGLKALQL AVSMLRVVSW BACU012647/1-515 ---------- ---------- ---------- ---------- ---MLRVVSW 51 100 ENSP00000364126/1-518 NINGIRRPLQ GVANQEPSNC AAVAVGRILD ELDADIVCLQ ETKVTRDALT ENSBTAP00000017537/1-514 NINGIRSPLQ GVRCEEPSSC SAMAMGRILD KLDADIVCLQ ETKVTRDVLT ENSTTRP00000004425/1-515 NINGIRSPVQ GVGNEEPSNC TAMAMGRILD KLDADIVCLQ ETKVTRDVLT bmy_18317T0/1-547 NINGIRSPVQ GVGYEEPSNC TAMAMGRILD KLDADIVCLQ ETKVTRDVLT BACU012647/1-515 NINGIRSPVQ GVGYEEPSNC TAMAMGRILD KLDADIVCLQ ETKVTRDVLT 101 150 ENSP00000364126/1-518 EPLAIVEGYN SYFSFSRNRS GYSGVATFCK DNATPVAAEE GLSGLFATQN ENSBTAP00000017537/1-514 EPLAIIEGYN SYFSFSRNRS GYSGVATFCK DSATPVAAEE GLSGLLSTQN ENSTTRP00000004425/1-515 EPLAIIEGCN SYFSFSRNRS GYSGVATFCK DSATPVAAEE GLSGLLATQN bmy_18317T0/1-547 EPLAIIEGCN SYFSFSRNRS GYSGVATFCK DSATPVAAEE GLSGLLATQN BACU012647/1-515 EPLAIIEGCN SYFSFSRNRS GYSGVATFCK DSATPVAAEE GLSGLLATQN 151 200 ENSP00000364126/1-518 GDVGCYGNMD EFTQEELRAL DSEGRALLTQ HKIRTWEGKE KTLTLINVYC ENSBTAP00000017537/1-514 GDVGCYGNMD DFTQEELRAL DSEGRALLTQ HKICTWEGKE KTLTLINVYC ENSTTRP00000004425/1-515 GDVGCYGNMD DFTQEELRAL DSEGRALLTQ HKICTWEGKE KTLTLINVYC bmy_18317T0/1-547 GDVGCYGNMD DFTQEELRAL DSEGRALLTQ HKICTWEGKE KTLTLINVYC BACU012647/1-515 GDVGCYGNMD DFTQEELRAL DSEGRALLTQ HKICTWEGKE KTLTLINVYC 201 250 ENSP00000364126/1-518 PHADPGRPER LVFKMRFYRL LQIRAEALLA AGSHVIILGD LNTAHRPIDH ENSBTAP00000017537/1-514 PHADPGKPER LTFKMRFYRL LQIRAEALLA AGSHVIILGD LNTAHRPIDH ENSTTRP00000004425/1-515 PHADPGKPER LAFKMRFYRL LQIRAEALLA AGXXXXXXXX XXXXXXXXXX bmy_18317T0/1-547 PHADPGKPER LAFKMRFYRL LQIRAEALLA AGSHVIILGD LNTAHRPIDH BACU012647/1-515 PHADPGKPER LAFKMRFYRL LQIRAEALLA AGSHVIILGD LNTAHRPIDH 251 300 ENSP00000364126/1-518 WDAVNLECFE EDPGRKWMDS LLSNLGCQSA SHVGPFIDSY RCFQPKQEGA ENSBTAP00000017537/1-514 WDAVNMECFE EDPGRKWMDG LLSNLGCESG SHMGPFIDSY RCFQPKQKGA ENSTTRP00000004425/1-515 XXXXXXECFQ EDPGRKWMDH LLSNLGCQAG SHTGPFIDSY RCFHPKQKGA bmy_18317T0/1-547 WDAVNL---- -------MDH LLSNLGCQAG SHTGPFIDSY RCFHPKQKGA BACU012647/1-515 WDAVNLECFE EDPGRKWMDH LLSNLGCQAG SHTEPFIDSY RYFHPKQKGA 301 350 ENSP00000364126/1-518 FTCWSAVTGA RHLNYGSRLD YVLGDRTLVI DTFQASFLLP EVMGSDHCPV ENSBTAP00000017537/1-514 FTCWSTVSGA RHLNYGSRLD YVLGDRTLVI DTFQSSFLLP EVMGSDHCPV ENSTTRP00000004425/1-515 FTCWSTVSGA RHLNYGSRLD YVLGDRTLVM DTFQASFLLP EVMGSDHCPV bmy_18317T0/1-547 FTCWSTVSGA RHLNYGSRLD YVLGDRTLVM DTFQASFLLP EVMGSDHCPV BACU012647/1-515 FTCWSTVSGA RHLNYGSRLD YVLGDRTLVM DTFQASFLLP EVMGSDHCPV 351 400 ENSP00000364126/1-518 GAVLSVSSVP AKQCPPLCTR FLPEFAGTQL KILRFLVPLE QSPVLEQSTL ENSBTAP00000017537/1-514 GAVLSVSSVP AKQCPPLCTC FLPEFAGTQL KILRFLVHFK QDPVFKQSAL ENSTTRP00000004425/1-515 GAVLSVSSVP AKQCPPLCTR FLPEFAGTQL KILRFLVRLE QDPVFRQSAL bmy_18317T0/1-547 GAVLSVSSVP AKQCPPLCTR FLPEFAGTQL KILRFLVRLE QDPVFRQSAL BACU012647/1-515 GAVLSVSSVP AKQCPPLCTR FLPEFAGTQL KILRFLVRLE QDPVFRQSAL 401 450 ENSP00000364126/1-518 QHNNQTRVQT CQNKAQVRST RPQPSQVGSS RGQKNLKSYF QPSPSCPQAS ENSBTAP00000017537/1-514 QPSNQTQVHM RQNKARVRST RSRPSKTGSS RGQKNLMSYF QPSSSGPQTS ENSTTRP00000004425/1-515 QLSNQTPVQM RQNKARVRST RSRPSQAGSS RGQKNLMSYF QPSSSRPRAS bmy_18317T0/1-547 QLSNQTPVQM RQNKARVRST RSRPSQAGSS RGQKNLMSYF QPSSSRPQAS BACU012647/1-515 QLSNQTPVQM RQNKARVRST RSRPSQAGSS RGQKNLMSYF QPSSSRPQAS 451 500 ENSP00000364126/1-518 PDIELPSLPL MSALMTPKTP EEKAVAKVVK GQAKTSEAKD EKELRTSFWK ENSBTAP00000017537/1-514 -NLDLPSL-- -GTLITPKTS EEDVMANVVE GQTKASEAKD EKEIRTSFWK ENSTTRP00000004425/1-515 SNLELPSL-- -GTLMTPKTS EEDVMANVVE GRAKASEAKD EKEVRTSFWK bmy_18317T0/1-547 PNLELPSL-- -GTLVTPKTS EEDVMANVVE GQAKASEAKN EKEVRTSFWK BACU012647/1-515 PNLELPSL-- -GTLVTPKTS EEDVMASVVE GRAKASEAKN EKEGRTSFWK 501 550 ENSP00000364126/1-518 SVLAGPLRTP LCGGHREPCV MRTVKKPGPN LGRRFYMCAR PRGPPTDPSS ENSBTAP00000017537/1-514 SLLGGPSPMP LCGGHREPCV MRTVKKPGPN LGRHFYMCAR PQGPPTDPSS ENSTTRP00000004425/1-515 SLLGGPLPMP LCGGHREPCV MRTVKKPGPN LGRHFYMCAR PQGPPTDPSS bmy_18317T0/1-547 SLLRGPLPMP LCGGHREPCV MRTVKKPGPN LGRHFYMCAR PQGPPTDPSS BACU012647/1-515 SLLGGPLPMP LCGGHREPCV MRTVKKPGPN LGRHFYMCAR PQGPPTDPSS 551 600 ENSP00000364126/1-518 RCNFFLWSRP S ENSBTAP00000017537/1-514 RCNFFLWSRP S ENSTTRP00000004425/1-515 RCSFFLWSRP S bmy_18317T0/1-547 RCSFFLWSRP N BACU012647/1-515 RCSFFLWSRP N