KEY:
ENSP* - Homo sapiens (Human)
ENSBTA* - Bos taurus (Cow)
ENSTTR* - Tursiops truncatus (Dolphin)
bmy_* - Balaena mysticetus (Bowhead whale)
BACU* - Balaenoptera acutorostrata (Minke whale)
Copy from below the line for a valid .msf file.
----------------------------------------------------------------------------------
NoName MSF: 5 Type: P Thu May 15 17:01:43 2014 Check: 00 ..
Name: ENSP00000332369/1-587 Len: 594 Check: 9357 Weight: 1.00
Name: ENSBTAP00000017538/1-587 Len: 594 Check: 6631 Weight: 1.00
Name: BACU012646/1-557 Len: 594 Check: 2061 Weight: 1.00
Name: bmy_18316T0/1-594 Len: 594 Check: 6452 Weight: 1.00
Name: ENSTTRP00000004439/1-587 Len: 594 Check: 6662 Weight: 1.00
//
1 50
ENSP00000332369/1-587 -------MVT AAMLLQCCPV LARGPTSLLG KVVKTHQFLF GIGRCPILAT
ENSBTAP00000017538/1-587 -------MVT AAMLLQRCPV LIRSPTGLLG KMIKTHQFLF GIGRCPILAT
BACU012646/1-557 MQNFGLKRVA AAMLLQRCPV LIRSPTALLG KMIKTHQFLF GIGRCPILAI
bmy_18316T0/1-594 MQNFGLKRVA AAMLLQRCPV LIRSPTALLG KMIKTHQFLF GIGRCPILAT
ENSTTRP00000004439/1-587 -------RVA AAMLLQRCPV LIRSPTAILG KMIKTHQFLF GIGRCPILAT
51 100
ENSP00000332369/1-587 QGPNCSQIHL KATKAGGDSP SWAKGHCPFM LSELQDGKSK IVQKAAPEVQ
ENSBTAP00000017538/1-587 QGPSFSQIHL KATKAGGDSP SWAKSHCPFM LLELQDGKSK IVQKAAPEVQ
BACU012646/1-557 QGTTCSQIHL KATKAGGDSP SWAKSHCPFM LLELQDGKSK IVQKAAPEVQ
bmy_18316T0/1-594 QGTTCSQIHL KATKAGGDSP SWAKSHCPFM LLELQDGKSK IVQKAAPEVQ
ENSTTRP00000004439/1-587 QGTTCSQIHL KATKAGGDSP SWAKSHCPFM LLELQDGKSK IVQKAAPEVQ
101 150
ENSP00000332369/1-587 EDVKAFKTDL PSSLVSVSLR KPFSGPQEQE QISGKVTHLI QNNMPGNYVF
ENSBTAP00000017538/1-587 EDVKTFKTDL PTSLASTSLK KTFSSPQEPE KNSEKVTHLI QNNMAGDHVF
BACU012646/1-557 EDVKTFKT-- ---------- ---------- ---------- -----GNHVF
bmy_18316T0/1-594 EDVKTFKTDL PISLASTSLR KPFFSPQQSE KNSEKVTHLI QNNMAGNHVF
ENSTTRP00000004439/1-587 EDVKTFKTDL PISLASTSLR KPFFSPQEPE KNSEKVTHLI QNNMAGNHVF
151 200
ENSP00000332369/1-587 SYDQFFRDKI MEKKQDHTYR VFKTVNRWAD AYPFAQHFSE ASVASKDVSV
ENSBTAP00000017538/1-587 GYDQFFRDKI MEKKQDHTYR VFKTVNRWAD AYPFAEHFFE ASVASKDVSV
BACU012646/1-557 GYDQFFRNKI MEKKQDHTYR VFKTVNRWAD AYPFAEHFFE ASVALKDVSV
bmy_18316T0/1-594 GYDQFFRNKI MEKKQDHTYR VFKTVNRWAD AYPFAEHFFE ASVASKDVSV
ENSTTRP00000004439/1-587 GYDQFFRNKI MEKKQDHTYR VFKTVNRWAD AYPFAEHFFE ASVASKDVSV
201 250
ENSP00000332369/1-587 WCSNDYLGMS RHPQVLQATQ ETLQRHGAGA GGTRNISGTS KFHVELEQEL
ENSBTAP00000017538/1-587 WCSNDYLGMS RHPRVLQATQ EILQRHGAGA GGTRNISGTS KFHVELEQEL
BACU012646/1-557 WCSNDYLGMS RHPRVLQATQ ETLQGHGAGA GGTRNISGTS RFHVELEQEL
bmy_18316T0/1-594 WCSNDYLGMS RHPRVLQATQ ETLQRHGAGA GGTRNISGTS RFHVELEQEL
ENSTTRP00000004439/1-587 WCSNDYLGMS RHPRVLQATQ ETLQRHGAGA GGTRNISGTS RFHVELEQEL
251 300
ENSP00000332369/1-587 AELHQKDSAL LFSSCFVAND STLFTLAKIL PGCEIYSDAG NHASMIQGIR
ENSBTAP00000017538/1-587 AELHQKDSAL LFSSCFVAND STLFTLAKIL PGCEIYSDAG NHASMIQGIR
BACU012646/1-557 AELHQKDSAL LFSSCFVAND STLFTLAKIL PGCEIYSDAG NHASMIQGIR
bmy_18316T0/1-594 AELHQKDSAL LFSSCFVAND STLFTLAKIL PGCEIYSDAG NHASMIQGIR
ENSTTRP00000004439/1-587 AELHQKDSAL LFSSCFVAND STLFTLAKIL PGCEIYSDAG NHASMIQGIR
301 350
ENSP00000332369/1-587 NSGAAKFVFR HNDPDHLKKL LEKSNPKIPK IVAFETVHSM DGAICPLEEL
ENSBTAP00000017538/1-587 NSGAAKFVFR HNDPDHLKKL LKKSNPETPK IVAFETVHSM DGAICPLEEL
BACU012646/1-557 NSGAAKFVFR HNDPDHLKKL LKKSNPETPK IVAFETVHSM DGAICPLEEL
bmy_18316T0/1-594 NSGAAKFVFR HNDPDHLKKL LKKSNPETPK IVAFETVHSM DGAICPLEEL
ENSTTRP00000004439/1-587 NSGAAKFVFR HNDPDHLKKL LKKSNPETPK IVAFETVHSM DGAICPLEEL
351 400
ENSP00000332369/1-587 CDVSHQYGAL TFVDEVHAVG LYGSRGAGIG ERDGIMHKID IISGTLGKAF
ENSBTAP00000017538/1-587 CDVAHQYGAL TFVDEVHAVG LYGSRGAGIG ERDGIMHKID IISGTLGKAF
BACU012646/1-557 CDVAHQYGAL TFVDEVHAVG LYGSRGAGIG ERDGIMHKID IISGTLGKAF
bmy_18316T0/1-594 CDVAHQYGAL TFVDEVHAVG LYGSRGAGIG ERDGIMHKID IISGTLGKAF
ENSTTRP00000004439/1-587 CDVAHQYGAL TFVDEVHAVG LYGSRGAGIG ERDGIMHKID IISGTLGKAF
401 450
ENSP00000332369/1-587 GCVGGYIAST RDLVDMVRSY AAGFIFTTSL PPMVLSGALE SVRLLKGEEG
ENSBTAP00000017538/1-587 GCVGGYIAST RDLVDMVRSY AAGFIFTTSL PPMVLSGALE SVRLLKGEEG
BACU012646/1-557 GCVGGYIAST RDLVDMVRSY AAGFIFTTSL PPMVLSGALE SVRLLKGEEG
bmy_18316T0/1-594 GCVGGYIAST RDLVDMVRSY AAGFIFTTSL PPMVLSGALE SVRLLKGEEG
ENSTTRP00000004439/1-587 GCVGGYIAST CDLVDMVRSY AAGFIFTTSL PPMVLSGALE SVRLLKGEEG
451 500
ENSP00000332369/1-587 QALRRAHQRN VKHMRQLLMD RGLPVIPCPS HIIPIRVGNA ALNSKLCDLL
ENSBTAP00000017538/1-587 QALRRAHQRN VKHMRQLLMD RGLPVIPCPS HIIPIRVGDA MLNTRICDLL
BACU012646/1-557 QALRRAHQRN VKHMRQLLMD RGLPAIPCPS HIIPIRVGDA ALNSRICDLL
bmy_18316T0/1-594 QALRRAHQRN VKHMRQLLMD RGLPVIPCPS HIIPIRVGDA ALNSRICDLL
ENSTTRP00000004439/1-587 QALRRAHQRN VKHMRQLLMD RGLPVIPCPS HIIPIRVGDA ALNSRICDLL
501 550
ENSP00000332369/1-587 LSKHGIYVQA INYPTVPRGE ELLRLAPSPH HSPQMMEDFV EKLLLAWTAV
ENSBTAP00000017538/1-587 LSKYGIYVQA INYPTVPRGE ELLRLAPSPH HSPQMMEDFV EKLLEAWTEV
BACU012646/1-557 LSKHGIYVQA INYPTVPRGE ELLRLAPSPH HSPQMMEDFV EKLLAAWTEV
bmy_18316T0/1-594 LSKHGIYVQA INYPTVPRGE ELLRLAPSPH HSPQMMEDFV EKLLAAWTEV
ENSTTRP00000004439/1-587 LSKHGIYVQA INYPTVPRGE ELLRLAPSPH HSPQMMEDFV EKLLAAWTEV
551 600
ENSP00000332369/1-587 GLPLQDVSVA ACNFCRRPVH FELMSEWERS YFGNMGPQYV TTYA
ENSBTAP00000017538/1-587 GLPLQDISIA ACNFCRRPVH FELMSEWERS YFGNMGPQYV TTYA
BACU012646/1-557 GLPLQDVSIA ACNFCRRPVH FELMSEWERS YFGNMGPQYV TTYA
bmy_18316T0/1-594 GLPLQDVSIA ACNFCRRPVH FELMSEWERS YFGNMGPQYV TTYA
ENSTTRP00000004439/1-587 GLPLQDVSIA ACNFCRRPVH FELMSEWERS YFGNMGPQYV TTYA