KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:01:43 2014 Check: 00 .. Name: ENSBTAP00000017541/1-782 Len: 786 Check: 3333 Weight: 1.00 Name: ENSP00000350249/1-634 Len: 786 Check: 9524 Weight: 1.00 Name: bmy_02145T0/1-603 Len: 786 Check: 2730 Weight: 1.00 Name: ENSTTRP00000002652/1-634 Len: 786 Check: 6447 Weight: 1.00 Name: BACU006832/1-785 Len: 786 Check: 7521 Weight: 1.00 // 1 50 ENSBTAP00000017541/1-782 MPLELIKEVN GVPEVDLLNK LHKVDIRSLQ PGSDYDKKYI QKLILILIML ENSP00000350249/1-634 ---------- ---------- ---------- ---------- ---------- bmy_02145T0/1-603 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002652/1-634 ---------- ---------- ---------- ---------- ---------- BACU006832/1-785 MPLELIKEVK GVPEVDLLSK LHKVDFRYLQ PGCDYSRKYI EGKLSLISSL 51 100 ENSBTAP00000017541/1-782 LQSLGFTCNY FSFTSEQDNS NSEISKINIL FFGSLAKDCA KVFYEGDTIA ENSP00000350249/1-634 ---------- ---------- ---------- ---------- ---------- bmy_02145T0/1-603 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002652/1-634 ---------- ---------- ---------- ---------- ---------- BACU006832/1-785 TYGGNRRAVL KIGLQEQENS NSEINTISVL FFGKLAKDCA KVFYEGDTIA 101 150 ENSBTAP00000017541/1-782 VAGFVVLSAS SSPSRDGKHC LFLKASENFK STVYVLLQLS VTAWLQEGSP ENSP00000350249/1-634 ---------- ---------- ---------- ---------- --------MS bmy_02145T0/1-603 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002652/1-634 ---------- ---------- ---------- ---------- --------MS BACU006832/1-785 VAGFVILSAS SSTSRDGKLC LFLKASEDFK STVYVYVK-S VRDFSTESMS 151 200 ENSBTAP00000017541/1-782 KAPATHYVYT PLNQLKGGMI VNVYGVVKFF KPPYLSRGTD YCSVVTIVDQ ENSP00000350249/1-634 LVPATNYIYT PLNQLKGGTI VNVYGVVKFF KPPYLSKGTD YCSVVTIVDQ bmy_02145T0/1-603 ---------- --DFIKGKNN VWCFELSIIL SNALKYEKSD YCSVVTIVDQ ENSTTRP00000002652/1-634 LVPATHYVYT PLNQLKSGMI VNVYGVVKFF KPPYLSKGTD YCSVVTIVDQ BACU006832/1-785 LVPATHYVYT PLNQLKSGMI VNVYGVVKFF KPPYLSKGTD YCSVVTIVDQ 201 250 ENSBTAP00000017541/1-782 TNVKLTCLFF SGNYEALPMI YKNGDIVRFH RLKIQVYKKE TQGITSSGFA ENSP00000350249/1-634 TNVKLTCLLF SGNYEALPII YKNGDIVRFH RLKIQVYKKE TQGITSSGFA bmy_02145T0/1-603 THVKLTCLFF SGNYEALPMI YKNGDIVRFH RLKIQVYKKE TQGITSSGFA ENSTTRP00000002652/1-634 THVKLTCLFF SGNYEALPMI YKNGDIVRFH RLKIQVYKKE TQGITSSGFA BACU006832/1-785 THVKLTCLFF SGNYEALPMI YKNGDIVRFH RLKIQVYKKE TQGITSSGFA 251 300 ENSBTAP00000017541/1-782 SLTFEGTLGA PIIPRTASKC FNFTAEDQKM VEALRIWAST HISPSSILVK ENSP00000350249/1-634 SLTFEGTLGA PIIPRTSSKY FNFTTEDHKM VEALRVWAST HMSPSWTLLK bmy_02145T0/1-603 SLTFEGTLGA PIIPRTSSKC FNFTAEDHKM VEALRVWAST HISPSSTLVK ENSTTRP00000002652/1-634 SLTFEGTLGA PIIPRTSSKC FNFTAEDHKM VEALRVWAST HISPSSTLVK BACU006832/1-785 SLTFEGTLGA PIIPRTSSKC FNFTAEDHKM VEALRVWAST HISPSSTLVK 301 350 ENSBTAP00000017541/1-782 LCDVQPMQYF DLTCQLLGKA EVDGASFLLK VWDGTRTPFP SWRVLMQDLA ENSP00000350249/1-634 LCDVQPMQYF DLTCQLLGKA EVDGASFLLK VWDGTRTPFP SWRVLIQDLV bmy_02145T0/1-603 LCDVQPMQYF DLTCQLLGKA EVDGASFLLK VWDGTRTPFP SWRVLIQDLV ENSTTRP00000002652/1-634 LCDVQPMQYF DLTCQLLGKA EVDGASFLLK VWDGTRTPFP SWRVLIQDLV BACU006832/1-785 LCDVQPMQYF DLTCQLLGKA EVDGASFLLK VWDGTKTPFP SWRVLIQDLV 351 400 ENSBTAP00000017541/1-782 LEGDLSRIHQ LQNLTADILV YDNHVQVAKS LKVGSFLRIY SLHTKLQSVS ENSP00000350249/1-634 LEGDLSHIHR LQNLTIDILV YDNHVHVARS LKVGSFLRIY SLHTKLQSMN bmy_02145T0/1-603 LEGDLSHIHR VQNLTIDILV YDNHVQVAKS LKVGSFLRIY SLHTKLQSVN ENSTTRP00000002652/1-634 LEGDLSHIHR VQNLTIDILV YDNHVQVAKS LKVGSFLRIY SLHTKLQSVN BACU006832/1-785 LEGDLSHIHR VQNLTIDILV YDNHVQVAKS LKVGSFLRIY SLHTKLQSVN 401 450 ENSBTAP00000017541/1-782 SENLATSLAL EFHLHGGTSY GRGIRVLPEN NSDVDQLKKI LESAHLPPNQ ENSP00000350249/1-634 SEN-QTMLSL EFHLHGGTSY GRGIRVLPES NSDVDQLKKD LESANLTANQ bmy_02145T0/1-603 SENLATFLAL EFHLHGGTSY GRGIRVLPES NSDVDQLK-- --------NE ENSTTRP00000002652/1-634 SENLATFLAL EFHLHGGTSY GRGIRVLPES NSDVDQLKKV LESVDLPANQ BACU006832/1-785 SENLATFLAL EFHLHGGTSY GRGIRVLPES NSDVDQLKKV LESVDLPANQ 451 500 ENSBTAP00000017541/1-782 SFGGVCQSEQ EDSFSNISSK DS----KLER CQQLSATILT DHQYLEKTPL ENSP00000350249/1-634 HSDVICQSEP DDSF---PSS GSVSLYEVER CQQLSATILT DHQYLERTPL bmy_02145T0/1-603 YYEG--DSCQ EYTY------ ---ILADFSN LIQKFFIVLT DHQYLEKTPL ENSTTRP00000002652/1-634 RLEGICQSEH EDSF---SSS GSVSLYELER CQQLSATILT DHQYLEKTPL BACU006832/1-785 CLDGICQSEH EDSFSNISSS GSVSLYEVER CQQLSATILT DYQYLEKTPL 501 550 ENSBTAP00000017541/1-782 CAILKQNAPQ QYRIRAKLRS YKPRRLFQSV KLYCPKCHLL QEVPHEIDLD ENSP00000350249/1-634 CAILKQKAPQ QYRIRAKLRS YKPRRLFQSV KLHCPKCHLL QEVPHEGDLD bmy_02145T0/1-603 CAILKQKAPQ QYRIRAKLRS YKPRRLFQSV KLYCLKCHSL QEVPHEGDLD ENSTTRP00000002652/1-634 CAILK-KAPQ QYRIXXXXXX XXXXXXXXXX XXXXXXXXXX QEVPHEGDLD BACU006832/1-785 CAILKQKAPQ QYRIRAKLRS YKPRRLFQSV KLYCLKCHSL QEVPHEGDLD 551 600 ENSBTAP00000017541/1-782 KILQEGTSKT PDTTLQNTSL YNSKVWTTKD QGERKVAIHF VKNNGILPLS ENSP00000350249/1-634 IIFQDGATKT PDVKLQNTSL YDSKIWTTKN QKGRKVAVHF VKNNGILPLS bmy_02145T0/1-603 IILQEGATKT PDSKLQNTSL YDSKIWTTKD QGERKVAVHF VKNNGILPLS ENSTTRP00000002652/1-634 IILQEGATKT PDSKLQNTSL YDSNIWTTKD QGERKVAVHF VKNNGILPLS BACU006832/1-785 IILQEGATKT PDSKLQNTSL YDSKIWTTKD QGERKVAVHF VKNNGILPLS 601 650 ENSBTAP00000017541/1-782 NDCLILIEGG TLSEICKLSD KFHSVIPVRS GHEDLEVLDL SAPFLIQGKI ENSP00000350249/1-634 NECLLLIEGG TLSEICKLSN KFNSVIPVRS GHEDLELLDL SAPFLIQGTI bmy_02145T0/1-603 NDCLILIEGG TLNEICKLSN KFHSVIPVRS GHEDLEVLDL SAPFLIQGKI ENSTTRP00000002652/1-634 NDCLILIEGG TLNEICKLSN KFHSVIPVRS GHEDLEVLDL SAPFLIQGKI BACU006832/1-785 NDCLILIEGG TLNEICKLSN KFHSVIPVRS GHEDLEVLDL SAPFLIQGKI 651 700 ENSBTAP00000017541/1-782 HHYGCKHCSS LRPIKNLNSL VNKTSWIPSS VAEALGIVPL QQVFVMTFTL ENSP00000350249/1-634 HHYGCKQCSS LRSIQNLNSL VDKTSWIPSS VAEALGIVPL QYVFVMTFTL bmy_02145T0/1-603 HHYGCKQCSS LRPIQNLNSL VDKTSWIPSS VAEVLGIVPL QHVFVMTFTL ENSTTRP00000002652/1-634 HHYGCKQCSS LRPIQNLNSL VDKTSWIPSS VAEVLGIVPL QHVFVMTFTL BACU006832/1-785 HHYGCKQCSS LRPIQNLNSL VDKTSWIPSS VAEVLGIVPL QHVFVMTFTL 701 750 ENSBTAP00000017541/1-782 DDGTGVLEAY LMDSENFFQI PASEVLNNDN LQHSMEMIMD MFCPPGAKID ENSP00000350249/1-634 DDGTGVLEAY LMDSDKFFQI PASEVLMDDD LQKSVDMIMD MFCPPGIKID bmy_02145T0/1-603 DDGTGVLEAY LMDSEKFFQI PASEVLMNDG LQQSMDMIMD MFCPPGVKID ENSTTRP00000002652/1-634 DDGTGVLEAY LMDSEKFFQI PASEVLIKDG LQQIMDMIMD MFCPPGLKID BACU006832/1-785 DDGTGVLEAY LMDSEKFFQI PASEVLMNDG LQQSMDMIMD MFCPPGVKID 751 800 ENSBTAP00000017541/1-782 AYPWLEFFIR SYNVTSGKEQ QICYQIFDTT IADDVI ENSP00000350249/1-634 AYPWLECFIK SYNVTNGTDN QICYQIFDTT VAEDVI bmy_02145T0/1-603 AYPWLECFIK SYNVTSGAEQ QICYQIFDTT VAEDLI ENSTTRP00000002652/1-634 AYPWLECFIK SYNVTSGAEQ QICYQIFDTT VAEDLI BACU006832/1-785 AYPWLECFIK SYNVTSGAEQ QICYQIFDTT VAEDLI