KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:02:03 2014 Check: 00 .. Name: ENSP00000266505/1-608 Len: 715 Check: 8235 Weight: 1.00 Name: bmy_15743T0/1-550 Len: 715 Check: 1050 Weight: 1.00 Name: ENSBTAP00000017574/1-634 Len: 715 Check: 9592 Weight: 1.00 Name: BACU016330/1-570 Len: 715 Check: 5021 Weight: 1.00 Name: ENSTTRP00000002795/1-609 Len: 715 Check: 2376 Weight: 1.00 // 1 50 ENSP00000266505/1-608 ---------- ---------- ---------- -MEMRWFLSK IQDDFRGGKI bmy_15743T0/1-550 MASMYNQALR ITVPNPMEAR YAERKAAVAS VDEFQEIPLL QRGREKDGFI ENSBTAP00000017574/1-634 ---------- ---------- ---------- -MENKWFLLM VRDDFKGGKI BACU016330/1-570 ---------- ---------- ---------- ---------- --------MS ENSTTRP00000002795/1-609 ---------- ---------- ---------- -MENKWFLSM VRDDFKYGKI 51 100 ENSP00000266505/1-608 NLEKTQRLLE K--------- ----LDIRCS YIHVKQ---- ---------- bmy_15743T0/1-550 TLILCCKLFY SPPPTWMASS LFPYLQFSFS SHRFQFPSAQ NKAFDRGNQL ENSBTAP00000017574/1-634 TLEKALKLLE K--------- ----LDIQCN TIHVKY---- ---------- BACU016330/1-570 KMELNLKKID S--------- ----VTLTYV DLKIQN---- ---------- ENSTTRP00000002795/1-609 TLEKTLKLLE K--------- ----LGIRCN TIHVKY---- ---------- 101 150 ENSP00000266505/1-608 ---------- -------IFK DNDRLKQGRI TIEEFRAIYR IITHREEIIE bmy_15743T0/1-550 GRDKTADYNE LYGMAYVITT DNDRLKQGRI TIEEFRRIYR IIAHREEIIE ENSBTAP00000017574/1-634 ---------- -------IFK DNDRLKQGRI TIEEFRTIYR IITYREEIIE BACU016330/1-570 ---------- -------FKT NNDRLKQGRI TIEEFRRIYR IIAHREEIIE ENSTTRP00000002795/1-609 ---------- -------IFK DNDRLKQGRI TIEEFRTIYR IIAHREEIIE 151 200 ENSP00000266505/1-608 IFNTYSENRK ILLASNLAQF LTQEQYAAEM SKAIAFEIIQ KYEPIEEVRK bmy_15743T0/1-550 IFNTYSENQK FLFEKNLAQF LTQEQYTLDI NKSTASEIIQ KYEPIEEVKQ ENSBTAP00000017574/1-634 IFNTYSENRK ILLEKNLVEF LMREQYTLDF NKSIASEIIQ KYEPIEEVKQ BACU016330/1-570 IFNTYSENRK FLFEKNLAQF LTQEQYTLDI NKSTASEIIQ KYEPIEEVKQ ENSTTRP00000002795/1-609 IFNTYSENRK FLFEKNLAQF LTQEQYTLDI NKSIASEIIQ KYEPIEEVKQ 201 250 ENSP00000266505/1-608 AHQMSLEGFT RYMDSRECLL FKNECRKVYQ DMTHPLNDYF ISSSHNTYLV bmy_15743T0/1-550 AHQMSFEGFT RYMDSSECLL FNNKYESVYQ DMTHPLSDYF ISSSHNTYLI ENSBTAP00000017574/1-634 AHQMSFEGFR RYMDSSECLL FDNKCDHVYQ DMTHPLTDYF ISSSHNTYLI BACU016330/1-570 AHQMSFEGFT RYMDSSECLL FNNKYESVYQ DMTHPLSDYF ISSSHNTYLI ENSTTRP00000002795/1-609 AHQMSFEGFR RYMDSSECLL FNNKYESVYQ DMTHPLSDYF ISSSHNTYLI 251 300 ENSP00000266505/1-608 SDQLLGPSDL WGYVSALVKG CRCLEIDCWD GAQNEPVVYH GYTLTSKLLF bmy_15743T0/1-550 SDQLVGPSDL WGYVSALVKG CRCLEIDCWD GSQNEPVVYH GYTFTSKLLF ENSBTAP00000017574/1-634 SDQLWGPSDL WGYISALVKG CRCLEIDCWD GSQNEPVVYH GYTFTSKLLF BACU016330/1-570 SDQLVGPSDL WGYVSALVKG CRCLEIDCWD GSQNEPVVYH GYTFTSKLLF ENSTTRP00000002795/1-609 SDQLVGPSDL WGYVSALVKG CRCLEIDCWD GSQNEPVVYH GYTFTSKLLF 301 350 ENSP00000266505/1-608 KTVIQAIHKY AFMTSDYPVV LSLENHCSTA QQEVMADNLQ ATFGESLLSD bmy_15743T0/1-550 KTVIRAIHKY AFITSDYPVV LSLENHCSPS QQEVMADSLQ STFGDALLSD ENSBTAP00000017574/1-634 KTVIQAINKY AFLASEYPVV LSLENHCSPS QQEVMADSLL ATFGDALLSY BACU016330/1-570 KTVIRAIHKY AFITSDYPVV LSLENHCSPS QQEVMADSLQ STFGDALLSD ENSTTRP00000002795/1-609 KTVIRAIHKY AFITSDYPVV LSLENHCSPS QQEVMADNLQ STFGDALLSD 351 400 ENSP00000266505/1-608 MLDDFPDTLP SPEALKFKIL VKNKKIGTLK ETHERKGSDK RG-------- bmy_15743T0/1-550 MLDDFPDKLP SPEALKFKIL VRNKKIGTLR ETRERRGSDK HGQVEECEEE ENSBTAP00000017574/1-634 TLDNFSDRLP SPEALKFKIL VRNKKIGTLH ETLERKGSDM HGKVEEFEEE BACU016330/1-570 TLDDFPDKLP SPEALKFKIL VRNKKIGTLR ETRERRGSDK HGQVEECEEE ENSTTRP00000002795/1-609 TLDDFPDKLP SPEALKFKIL VRNKKIGTLR ETRERRGSDK HE-------- 401 450 ENSP00000266505/1-608 ---------- ---------- --DNQDKETG VKKLPGVMLF KKKKTRKLKI bmy_15743T0/1-550 EEAEQEEEEN EAKGPEPSDA FQDNLEKEAE SKRAVGIPLF KKK---KLKI ENSBTAP00000017574/1-634 EEIEQEEDGS GAKEPEPVGD FQDDLAKEEQ LKRVVGIPLF RKK---KIKI BACU016330/1-570 EEAEQEEEEN EAKGPEPSDA FQDDLEKEAE SKRAVGIPLF KKK---KLKI ENSTTRP00000002795/1-609 ---------- ---------- --DDLEKEAE SKGAVGIPLF KKK-TAKLKI 451 500 ENSP00000266505/1-608 ALALSDLVIY TKAEKFKSFQ HSRLYQQFNE NNSIGETQAR KLSKLRVHEF bmy_15743T0/1-550 AMALSDLVIY TKAEKFRSFH HSRLYQQFNE SNSIGESQAR KLSKLRG--- ENSBTAP00000017574/1-634 SMALSDLVIY TKVEKFKSFH HSHLYQQFNE SNSIGESQAR KLTKLAAREF BACU016330/1-570 ATALSDLVIY TKAEKFRSFH HSRLYQQFNE SNSIGESQAR KLSKLRANEF ENSTTRP00000002795/1-609 ATALSDLVIY TKIEKFRSFH HSRLYQQFNE SNSIGESQAR KLSKLRPNEF 501 550 ENSP00000266505/1-608 IFHTRKFITR IYPKATRADS SNFNPQEFWN IGCQMVALNF QTPGLPMDLQ bmy_15743T0/1-550 --HIKFYFTE L--------- NHYLSHEIL- ---------- --------IE ENSBTAP00000017574/1-634 ILHTRRFITR VYPKALRADS SNFNPQEFWN VGCQMVALNF QTPGVPMDLQ BACU016330/1-570 ILHTTKFITR IYPKATRTDS SNFNPQEFWN VGCQMVALNF QTPGLPMDLQ ENSTTRP00000002795/1-609 ILHTTKFITR IYPKATRADS SNFNPQEFWN VGCQMVALNF QTPGLPMDLQ 551 600 ENSP00000266505/1-608 NGKFLDNGGS GYILKPHFLR ESKSYFNPSN I-KEGMPITL TIRLISGIQL bmy_15743T0/1-550 NVQFMK---- ---------R ASFEEFSTLG VLESSN---- ---------- ENSBTAP00000017574/1-634 NGKFLDNGCS GYVLKPRFLR DKKTKFNPHK VQIDSNPLTL TIRLISGIQL BACU016330/1-570 NGKFLDNGGS GYILKPHFLR DSKTKFNPNK ALMDSNPIIL MIRLISGIQL ENSTTRP00000002795/1-609 NGKFLDNGGS GYILKPHFLR DSKTKFNPNK ALMDSNPVIL MIRLISGIQL 601 650 ENSP00000266505/1-608 PLT-HSSSNK GDSLVIIEVF GVPNDQMKQQ TRVIKKNAFS PRWNETFTFI bmy_15743T0/1-550 ---------- ---------- ---DESLASR VEVIPK---- ---------- ENSBTAP00000017574/1-634 PPSYQ---NK ADTLVIVEIF GVPNDQMKQQ SRVIKKNAFN PRWNETFTFV BACU016330/1-570 PPSYHSSSNK ADTLVSVEIL GVPNDQMKQQ SRVIKKN--- ---------- ENSTTRP00000002795/1-609 PPSCHSSSNK ADTLVIIEIL GVPNDQMKQQ SRVIKKNAFS PRWNETFTFI 651 700 ENSP00000266505/1-608 IHVPELALIR FVVEGQGLIA GNEFLGQYTL PLLCMNKGYR RIPLFSRMGE bmy_15743T0/1-550 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000017574/1-634 IQVPELALIR FVAENQGLIA GNEFLGQYTL PVLCMNRGYR RVPLFSKMGE BACU016330/1-570 ---------- ---------- ---------- -------GYR RVPLFSKMGE ENSTTRP00000002795/1-609 IQVPELALIR FVVENQGLIA GNEFLGQYTL PVLCMNKGYR RVPLFSKMGE 701 750 ENSP00000266505/1-608 SLEPASLFVY VWYVR bmy_15743T0/1-550 ---------- ----- ENSBTAP00000017574/1-634 SLEPASLFIY VWYIR BACU016330/1-570 SLEPASLFIY VWYVR ENSTTRP00000002795/1-609 SLEPASLFIY VWYVR