KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:02:09 2014 Check: 00 .. Name: BACU016603/1-473 Len: 628 Check: 8237 Weight: 1.00 Name: bmy_11687T0/1-385 Len: 628 Check: 9654 Weight: 1.00 Name: ENSBTAP00000017592/1-605 Len: 628 Check: 3096 Weight: 1.00 Name: ENSTTRP00000008452/1-626 Len: 628 Check: 9952 Weight: 1.00 Name: ENSP00000419975/1-626 Len: 628 Check: 1783 Weight: 1.00 // 1 50 BACU016603/1-473 ---------- ---------M EAAAAEMDYP EGKGSRAADK AVAMVMKEIP bmy_11687T0/1-385 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000017592/1-605 ---------- ---------- --LEYLVINN KGKGSRAADK AVAMVMKEIP ENSTTRP00000008452/1-626 MYQGHMQKSK EKGYGKLSSD EDLKIIVDQK QGKGSRAADK AVAMVMKEIP ENSP00000419975/1-626 MYQGHMQKSK EQGYGKLSSD EDLEIIVDQK QGKGSRAADK AVAMVMKEIP 51 100 BACU016603/1-473 REESAEEKPL LTMTSQLVNE QQESRPLLSP SIDDFLCETK SEAIARPVTS bmy_11687T0/1-385 ---------- ---------- --MSNILLEK CFK------- --------TS ENSBTAP00000017592/1-605 REESAEEKPL LTMTSQLVNE QQESRPLLSP SIDDFLCETK SEAIARPVTS ENSTTRP00000008452/1-626 REESAEEKPL LTMTSQLVNE QQESRPLLSP SIDDFLCETK SEAIARPVTS ENSP00000419975/1-626 REESAEEKPL LTMTSQLVNE QQESRPLLSP SIDDFLCETK SEAIARPVTS 101 150 BACU016603/1-473 NTAVLTTGLD LLDLSEPVSQ TQTKAKKLEA SSKTSSLKKK ADGPDLISAD bmy_11687T0/1-385 STCIF----- ---------- ---------- ---------- ---------- ENSBTAP00000017592/1-605 NTAVLTTGLD LLDLSEPVSQ TQSKAKKLEA SSKTSSLKKK ADGSDLISAD ENSTTRP00000008452/1-626 NTAVLTTGLD LLDLSEPVSQ TQTKAKKLET SSKTSSLKKK VDGPDLISAD ENSP00000419975/1-626 NTAVLTTGLD LLDLSEPVSQ TQTKAKKSEP SSKTSSLKKK ADGSDLISTD 151 200 BACU016603/1-473 AEQRGQALRN SETASLDLVD IQTQLEKWDD VKFHGDRNSK GHPMAERKSS bmy_11687T0/1-385 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000017592/1-605 AEQRGQALRG SETASLDLTD IQTQLEKWDD VKFHGDRNSK GHPMAERKSS ENSTTRP00000008452/1-626 AEQRGQALRN PETASLDL-D IQTQLEKWDD VKFHGDRNSK GHPMAERKSS ENSP00000419975/1-626 AEQRGQPLRV PETSSLDL-D IQTQLEKWDD VKFHGDRNTK GHPMAERKSS 201 250 BACU016603/1-473 SSRTGSKELL WSSEHRSQPE LSGGKSALNS ESAAELELVP PTQARLTKEQ bmy_11687T0/1-385 ------KKLF ----KKASPQ Y--------- ---------- ---------- ENSBTAP00000017592/1-605 SSRTGSKELL WSSEHRSQPE LSGGKSALNS ESASELELVP PTQARLTKEQ ENSTTRP00000008452/1-626 SSRTGSKELL WSSEHRSQPE LSGGKSALNS ESAAELELVP PTQARLTKEQ ENSP00000419975/1-626 SSRTGSKELL WSSEHRSQPE LSGGKSALNS ESASELELVA PTQARLTKEH 251 300 BACU016603/1-473 RWGSALLSRN HSLEEEFERA KAAVETDNYR FGSISLQ--- ---------- bmy_11687T0/1-385 ---------- ---------- -LNVQSDTEF WDKMQAEWEE MARRNWISEN ENSBTAP00000017592/1-605 RWGSALLSRN HSLEEEFERA KAAVESDTEF WDKMQAEWEE MARRNWISEN ENSTTRP00000008452/1-626 RWGSALLSRN HSLEEEFERA KAAVESDTEF WDKMQAEWEE MARRNWISEN ENSP00000419975/1-626 RWGSALLSRN HSLEEEFERA KAAVESDTEF WDKMQAEWEE MARRNWISEN 301 350 BACU016603/1-473 ---------- ------CFDG DLRM---PGA --DGTDPVRE ---------R bmy_11687T0/1-385 QEAQNQVTIS ASEKGYYFHT ENPFKDWPGA FEEGLKRLKE GDLPVTILFM ENSBTAP00000017592/1-605 QEAQNQVTIS ASEKGYYFHT ENPFKDWPGA FEEGLKRLKE GDLPVTILFM ENSTTRP00000008452/1-626 QEAQNQVTIS ASEKGYYFHT ENPFKDWPGA FEEGLKRLKE GDLPVTILFM ENSP00000419975/1-626 QEAQNQVTIS ASEKGYYFHT ENPFKDWPGA FEEGLKRLKE GDLPVTILFM 351 400 BACU016603/1-473 EREISEQRAT SSRVRLYDIV AVFPKTEKLF HVA---CTHL DVD----LVC bmy_11687T0/1-385 EAAILQDPGD AEAWQFLGIT QAENENEQAA IVALQRCLEL QPNNLKALMA ENSBTAP00000017592/1-605 EAAILQDPGD AEAWQFLGIT QAENENEQAA IVALQRCLEL QPNNLKALMA ENSTTRP00000008452/1-626 EAAILQDPGD AEAWQFLGIT QAENENEQAA IVALQRCLEL QPNNLKALMA ENSP00000419975/1-626 EAAILQDPGD AEAWQFLGIT QAENENEQAA IVALQRCLEL QPNNLKALMA 401 450 BACU016603/1-473 ITVA------ ---------- --EKLPFY-- ---------- ----FKRPPI bmy_11687T0/1-385 LAVSYTNTGH QQDACEALKN WIKQNPKYKY LVKSKKGSPG LTRRMSKSPV ENSBTAP00000017592/1-605 LAVSYTNTGH QQDACEALKN WIKQNPKYKY LVKSKKGSPG LTRRMSKSPV ENSTTRP00000008452/1-626 LAVSYTNTGH QQDACEALKN WIKQNPKYKY LVKSKKGSPG LTRRMSKSPV ENSP00000419975/1-626 LAVSYTNTGH QQDACDALKN WIKQNPKYKY LVKSKKGSPG LTRRMSKSPV 451 500 BACU016603/1-473 NVAIDRGVGF ELVYSPAIKD STMRRYTISN ALNLMQVCKG KNVIISSAAE bmy_11687T0/1-385 DSSVLEGVK- ELYLEAAHQN GDMIDPDLQT GLGVLFHLSG EFNRAIDAFN ENSBTAP00000017592/1-605 DSSVLEGVK- ELYLEAAHQN GDVIDPDLQT GLGVLFHLSG EFNRAIDAFN ENSTTRP00000008452/1-626 DSSVLEGVK- ELYLEAAHQN GDMIDPDLQT GLGVLFHLRG EFNRAIDAFN ENSP00000419975/1-626 DSSVLEGVK- ELYLEAAHQN GDMIDPDLQT GLGVLFHLSG EFNRAIDAFN 501 550 BACU016603/1-473 RPLEIRGP-Y DVAN-LGLLF GLSESDAKAA VSTN------ ---------- bmy_11687T0/1-385 AALTVRPEDY SLWNRLGATL ANGDRSEEAV EAYTRALEIQ PGFIRSRYNL ENSBTAP00000017592/1-605 AALTVRPEDY SLWNRLGATL ANGDRSEEAV EAYTRALEIQ PGFIRSRYNL ENSTTRP00000008452/1-626 AALTVRPEDY SLWNRLGATL ANGDRSEEAV EAYTRALEIQ PGFIRSRYNL ENSP00000419975/1-626 AALTVRPEDY SLWNRLGATL ANGDRSEEAV EAYTRALEIQ PGFIRSRYNL 551 600 BACU016603/1-473 ---CRAVLLH GEARKTAFGI ISTVKKPRTS E--------- ---------- bmy_11687T0/1-385 GISCINLGAY REAVSNFLTA LSLQRKSRNQ QQVPHPAISG NIWAALRIAL ENSBTAP00000017592/1-605 GISCINLGAY REAVSNFLTA LSLQRKSRNQ QQVPHPAISG NIWAALRIAL ENSTTRP00000008452/1-626 GISCINLGAY REAVSNFLTA LSLQRKSRNQ QQVPHPAISG NIWAALRIAL ENSP00000419975/1-626 GISCINLGAY REAVSNFLTA LSLQRKSRNQ QQVPHPAISG NIWAALRIAL 601 650 BACU016603/1-473 --VDDDSLPA C--------- -KKAKCES bmy_11687T0/1-385 SLMDQPELFQ AANLGDLDVL LRAFNLDP ENSBTAP00000017592/1-605 SLMDQPELFQ AANLGDLDVL LRAFNLDP ENSTTRP00000008452/1-626 SLMDQPELFQ AANLGDLDVL LRAFNLDP ENSP00000419975/1-626 SLMDQPELFQ AANLGDLDVL LRAFNLDP