KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:02:09 2014 Check: 00 .. Name: ENSP00000356272/1-449 Len: 452 Check: 7704 Weight: 1.00 Name: ENSBTAP00000017596/1-451 Len: 452 Check: 7164 Weight: 1.00 Name: ENSTTRP00000013456/1-446 Len: 452 Check: 932 Weight: 1.00 Name: bmy_14544T0/1-449 Len: 452 Check: 3821 Weight: 1.00 Name: BACU020178/1-440 Len: 452 Check: 2543 Weight: 1.00 // 1 50 ENSP00000356272/1-449 MPATLLRAVA RSHHILSKAH QCRRIGHLML KPLKEFENTT CSTLTIRQSL ENSBTAP00000017596/1-451 MSARLLRALA GSRHILSKAC QCQRLIHQML KPLKEFETAA RTALTRNQNL ENSTTRP00000013456/1-446 MPARLLRSLA RSHYILSEAC QCQRLVHRTL KPLKEFETTT CNTLTRSQNV bmy_14544T0/1-449 MSARFLRSLA RCHCILSKAC QCQRLVHRTL KPLKEFETTT CNTLTRSQNV BACU020178/1-440 MSARLLRSLA RCHYILSKAC QCQRLVHRTL KPLKEFETTA CNTLTRSQNV 51 100 ENSP00000356272/1-449 DLFLPDKTAS GLNKSQILEM NQKKSDTSML SPLNAARCQD EKAHLPTMKS ENSBTAP00000017596/1-451 DLFFPDAATG GLNKSQILWM NQKISNTNVL PPFNTACCQD GKAHLPTRNS ENSTTRP00000013456/1-446 NFFFPDTAAV GLNKSQVLEM NRKISNTNVL SPLNTARYED EKEHLPTRNS bmy_14544T0/1-449 NLFFPDTAAV GLNKSQVPEM NRKISNTNVL SPLNTARYQD EKEHLPTRNS BACU020178/1-440 NLFFPDTAAV GLNKSQVLEM NRKISNTNVL SPLNTARYQD EKEHLPTRNS 101 150 ENSP00000356272/1-449 FGTHRRVTHK PNLLGSKWFI KILKRHFSSV STETFVPKQD FPQVKRPLKA ENSBTAP00000017596/1-451 VSTHRKVTHK PNLLGSKWFI KILKRHSSSV STET-VSKQD FPQIKRPLKA ENSTTRP00000013456/1-446 LGTHRKVIHR PNLLGFKWFI KILKRHSSSV STETLVSKQD FPQIKRPLKA bmy_14544T0/1-449 LGTHRKVTHK PNLLGFKWFI KILKRHSSSV STETLISKQD FPQIKRPLKA BACU020178/1-440 LGTHRKVTHK PNLLGFKWFI KILKRHSSSV STETLVSKQD FPQIKRPLKA 151 200 ENSP00000356272/1-449 SRTRQPSRTN LPVLSVNEDL MHCTAFATAD EYHLGNLSQD LASHGYVEVT ENSBTAP00000017596/1-451 SRTRQPSRTN LPVLPVNEDL MQCTAFATAD EYHLGNLSQD LTSHGYVEVT ENSTTRP00000013456/1-446 SRTRQPSRTN LPVLPVNKDL MRCTAFATAD EYHLGSLSQD LTSHGYVEVT bmy_14544T0/1-449 SRTRQPSRTN LPVLPVNKDL MHCTAFATAD EYHLGSLSQD LASHGYVEVT BACU020178/1-440 SRTRQPSRTN LPVLPVNKDL MHCTAFATAD EYHLGSLSQD LASHGYVEVT 201 250 ENSP00000356272/1-449 SLPRDAANIL VMGVENSAKE GDPGTIFFFR EGAAVFWNVK DKTMKHVMKV ENSBTAP00000017596/1-451 SLPRDAANIL VMGVENSAKE GDPGTIFFFR EGAAVFWNVK DQTMKHVMQV ENSTTRP00000013456/1-446 SLPRDAANIL VIGMENSAKE GDAGTIFFFR EGAAVFWNVK DKTMKHVMQV bmy_14544T0/1-449 SLPRDAANIL VIGMENSAKE GDPGTIFFFR EGAAVFWNVK DKTMKHVMQV BACU020178/1-440 SLPRDAANIL VIGIENSAKE GDPGTIFFFR EGAAVFWNVK DKTMKHVMQV 251 300 ENSP00000356272/1-449 LEKHEIQPYE IALVHWENEE LNYIKIEGQS KLHRGEIKLN SELDLDDAIL ENSBTAP00000017596/1-451 LEKHEIQPYE IALVHWENEE LNYTKTEGQS KLHRGEIRLN SELDLDDVIL ENSTTRP00000013456/1-446 LEKHEIHPYE IALVHWENEE LNYSKTEGQS KLHRGEIRLN SELDLDDAIL bmy_14544T0/1-449 LEKHEIQPYE IALVHWENEE LNYSKTEGQS KLHRGEIRLN SELDLEDAIL BACU020178/1-440 LEKHEIQPYE IALVHWENEE LNYSKTEGQS KLHRGEIRLN SELDLEDAIL 301 350 ENSP00000356272/1-449 EKFAFSNALC LSVKLAIWEA SLDKFIESIQ SIPEALKAGK KVKLSHEEVM ENSBTAP00000017596/1-451 EKFAFSNALC LSVKLAIWEA SLDKFVESIQ SIPEALKAGK KVKLSHEEVM ENSTTRP00000013456/1-446 EKFAFSNALC LSVKLAIWEA ALDKFVESIQ S---ALKAGK KVKLSHEEVM bmy_14544T0/1-449 EKFAFSNALC LSVKLAIWEA SLDKFVESIQ SIPEALKAGK KVKLSHEEVM BACU020178/1-440 EKFAFSNALC LSVKLAIWEA SLDKFVESIQ SIPEALKAGK KVKLSHEEVM 351 400 ENSP00000356272/1-449 QKIGELFALR HRINLSSDFL ITPDFYWDRE NLEGLYDKTC QFLSIGRRVK ENSBTAP00000017596/1-451 QKMGELFALR HRINLSSDFL ITPDFYWDRE NLEELYDKTC RFLSITRRVK ENSTTRP00000013456/1-446 QKMGELFALR HHINLSSDFL ITPDFYWDRE NLEELYDKTC RFLSITRRVK bmy_14544T0/1-449 QKMGELFALR HHINLSSDFL ITPDFYWDRE NLEELYDKTC RFLSITRRVK BACU020178/1-440 QKMGELFALR HHINLSSDFL ITPDFYWDRE NLEELYDKTC RFLSITRRVK 401 450 ENSP00000356272/1-449 VMNEKLQHCM ELTDLMRNHL NEKRALRLEW MIVILITIEV MFELGRVFF- ENSBTAP00000017596/1-451 VMNEKLQHCM ELTDLMRNHL TEKRALRLEW MIVILITIEV LFELGRVFFL ENSTTRP00000013456/1-446 VMNEKLQHCM ELTDLMRNHL TEKRTLRLEG MIVILITIEV MFELGRAFF- bmy_14544T0/1-449 VMNEKLQHCM ELTDLMRNHL TEKRTLRLEW MIVILITIEV MFELGRVFF- BACU020178/1-440 VMNEKLQHCM ALTDLMRNHL TEKRTLRLEW MIVILITIEV ---------- 451 500 ENSP00000356272/1-449 -- ENSBTAP00000017596/1-451 IK ENSTTRP00000013456/1-446 -- bmy_14544T0/1-449 -- BACU020178/1-440 --