KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:02:09 2014 Check: 00 .. Name: ENSP00000265433/1-754 Len: 798 Check: 697 Weight: 1.00 Name: ENSBTAP00000017598/1-754 Len: 798 Check: 1327 Weight: 1.00 Name: ENSTTRP00000012443/1-746 Len: 798 Check: 2099 Weight: 1.00 Name: bmy_08037T0/1-716 Len: 798 Check: 715 Weight: 1.00 Name: BACU009432/1-705 Len: 798 Check: 5784 Weight: 1.00 // 1 50 ENSP00000265433/1-754 ---------- ---------- ---------- ---------- MWKLLPAAGP ENSBTAP00000017598/1-754 ---------- ---------- ---------- ---------- MWKLVPAAGP ENSTTRP00000012443/1-746 ---------- ---------- ---------- ---------- MWKLLPAAGP bmy_08037T0/1-716 CGFRERARPG VRANRWRCGR ARRSAAVTLP HIGQTLVFQA MWKLLPAAGP BACU009432/1-705 ---------- ---------- ---------- ---------- MWKLLPAAGP 51 100 ENSP00000265433/1-754 AGGEPYRLLT GVEYVVGRKN CAILIENDQ- SISRNHAVLT ANFSVTNLSQ ENSBTAP00000017598/1-754 A-REPYRLLT GVEYIVGRKN CGILIEDDQ- SISRNHATLT ANFSVTNLSQ ENSTTRP00000012443/1-746 A-RXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXLT ANFSVT-LSQ bmy_08037T0/1-716 A-REPYRLLA GVEYIVGRKN CGILIEDDQ- SISRNHAVLT ANFSVTNLSQ BACU009432/1-705 A-REPYRLLA GVEYIVGRKN CGILIEDDQ- SISRNHAVLT ANFSVTNLSQ 101 150 ENSP00000265433/1-754 TDEIPVLTLK DNSKYGTFVN EEKMQNGFSR TLKSGDGITF GVFGSKFRIE ENSBTAP00000017598/1-754 TDEIPVLTIK DNSKYGTFVN EEKMQNGLSQ ILKSGDRVTF GVFESKFRVE ENSTTRP00000012443/1-746 TDEIPILTIK DNSKYGTFVN EEKMQNGLSR ILKTGDRVTF GVFESKFRVE bmy_08037T0/1-716 TDEIPVLTIK DNSKYGTFVN EEKMQNGLSR ILKTGDRVTF GVFESKFKVE BACU009432/1-705 TDEIPVLTIK DNSKYGTFVN EEKMQNGLSR ILKTGDRVTF GVFESKFKVE 151 200 ENSP00000265433/1-754 YEPLVACSSC LDVSGKTALN QAILQLGGFT VNNWTEECTH LVMVSVKVTI ENSBTAP00000017598/1-754 YEPLVACSSC LDVSGKTALS HAILQLGGLT VNNWTEECTH LVMVSVKVTI ENSTTRP00000012443/1-746 YEPLVACSSC LDVSGKTALS QAVLQLGGLT VNNWTEECTH LVMTSVKVTI bmy_08037T0/1-716 YEPLVACSSC LDVSGKTALS QAVLQLGGLT VNNWTEECTH LVMVSVKVTI BACU009432/1-705 YEPLVACSSC LDVSGKTALS QAVLQLGGLT VNNWTEECTH LVMVSVKVTI 201 250 ENSP00000265433/1-754 KTICALICGR PIVKPEYFTE FLKAVESKKQ PPQIESFYPP LDEPSIGSKN ENSBTAP00000017598/1-754 KTICALICGR PIVKPEYFTE FLKAVQSKKQ LPEIESFYPP VDEPAIESKN ENSTTRP00000012443/1-746 KTICALICGR PIVKPEYFTE FLKTVQSKKQ PPEIESFYPP IDEPVIGSKN bmy_08037T0/1-716 KTICALICGR PIVKPEYFTE FLKTVQSKKQ PPEIESFYPP IDEPVIGSKN BACU009432/1-705 KTICALICGR PIVKPEYFTE FLKTVQSKKQ PPEIESFYPP IDEPVIGSKN 251 300 ENSP00000265433/1-754 VDLSGRQERK QIFKGKTFIF LNAKQHKKLS SAVVFGGGEA RLITEENEEE ENSBTAP00000017598/1-754 IDLSGRQERK QIFKGKTFVF LNAKQHKKLS AAVIFGGGDA RLITEENKED ENSTTRP00000012443/1-746 IDLSERQERK QIFKGKTFVF LNAKQHKKLS AAVVFGGGDA RLITEDN-EE bmy_08037T0/1-716 IDLSGRQERK QIFKGKTFVF LNAKQHKKLS AAVVFGGGDT RLITEDNEEE BACU009432/1-705 IDLSGRQERK QIFKGKTFVF LNAKQHKKLS AAVVFGGGDT RLITEDNEEE 301 350 ENSP00000265433/1-754 HNFFLAPGTC VVDTGITNSQ TLIPDCQKKW IQSIMDMLQR QGLRPIPEAE ENSBTAP00000017598/1-754 DSFFSAPGTC VVDAGLTDSQ TFIPDSQKKW IHSIMDILQR RGLRPIPEAE ENSTTRP00000012443/1-746 DSFFSAPGTC VVDVGITDSQ TLIPDSQKKR IHSIMDILQR QGLRPIPEAE bmy_08037T0/1-716 DSFFSAPGTC VVDVGITDSQ TLIPDSQKKW IHSIMDILQR QGLRPIPEAE BACU009432/1-705 DSFFSAPGTC VVDVGITDSQ TLIPDSQKKW IHSIMDILQR QGLRPIPEAE 351 400 ENSP00000265433/1-754 IGLAVIFMTT KNYCDPQGHP STGLKTTTPG PSLSQGVSVD EKLMPSAPVN ENSBTAP00000017598/1-754 IGLAVLFVTT ENYCDPQGQP STGLKTTTPG PSLSQALPAN ENLMPNASVN ENSTTRP00000012443/1-746 IGLAVIFITT ENYCDPQGQP STGLKTTTPG PSLSQVLPAN ENLMPGAPVN bmy_08037T0/1-716 IGLAVIFITT ENYCDPQGQP STGLKTTTPG PGLSQVLPAN ENLMPGAPVN BACU009432/1-705 IGLAVIFITT ENYCDPQGQP STGLKTTTPG PGLSQVLPAN ENLMPGAPVN 401 450 ENSP00000265433/1-754 TTTYVADTES EQADT-WDLS ERPKEIKVSK MEQKFRMLSQ DAPTVKESCK ENSBTAP00000017598/1-754 TTTYVADTES EQADTCMDLS ERPKEIKIFG MEPKCRILSQ ETSTVKKPHK ENSTTRP00000012443/1-746 TTTYVADTQS EQGNK-WNLS ERPKEIKIFG MEQKFRIPSQ ETSTVKEPHK bmy_08037T0/1-716 TTTYVADTQS EQGDTCMNLS ERPKEIKIFG MEQKFRIPSQ ESSTVKEPHK BACU009432/1-705 TTTYVADTQS EQGDTCMNLS ERPKEIKIFG MEQKFRIPSQ ESSTVKEPHK 451 500 ENSP00000265433/1-754 TSSNNNSMVS NTLAKMRIPN YQLSPTKLPS INKSKDRASQ QQQTNSIRNY ENSBTAP00000017598/1-754 ISSNNN-IVS NTLVRMKIPN YQLSPTKVPH VNKSRGWPSQ HQQTNSIRDY ENSTTRP00000012443/1-746 VNSSNNNIVS NTLVSMKIPK CQLSPTKFPG VNKSGDWASQ HQQTNSIKNY bmy_08037T0/1-716 VNSNNNNIVS NTLVSMKIPN YQLSPTKFPG VNKSGDRASQ HQQTNSIKNY BACU009432/1-705 VNSNNNNIVS NTLVSMKTPN YQLSPTKFPG VNKSGDRASQ HQQTNSIKNY 501 550 ENSP00000265433/1-754 FQP--STKKR ERDEENQEMS SCKSARIETS CSLLEQTQPA TPSLWKNKEQ ENSBTAP00000017598/1-754 FQPLTSPQKR ERDEENQEMS LSKSARMETS CSLLEQTQPT TSLIRKNKDE ENSTTRP00000012443/1-746 FQP--STKKR ERDEENQEMS LSKSARIEMS CSLLEQTQPT TSSVWNNKEQ bmy_08037T0/1-716 FQP--STKKR ERDEENQEMS LSKSARIEMS CSLLEQTQPT TSSVWNNKEQ BACU009432/1-705 FQP--STKKR ERDEENQEMS LSKSARIEMS CSLLEQTQPT TSSVWNNKEQ 551 600 ENSP00000265433/1-754 HLSENEPVDT NSDNNLFTDT DLKSIVKNSA SKSHAAEKLR SNKKREMDDV ENSBTAP00000017598/1-754 HLSQNVLVEE NPDNS-YADT NVKPTVKNYA NKSLFTENLK SKKRKEIDDL ENSTTRP00000012443/1-746 ---QNEPVER NPDNS-YADI DLKSTVKNSA NKSLSTEKLR SEKRKEIDDL bmy_08037T0/1-716 ---QNEPVEK KPDNS-YADI DLKSTVKNSA NKSLSTEKLR SEKRKEIDDL BACU009432/1-705 ---QNEPVEK KPDNS-YADV DLKSTVKNSA NKSLSTEKLR SEKRKEIDDL 601 650 ENSP00000265433/1-754 AIEDEVLEQL FKDTKPELEI DVKVQKQEED VNVRKRPRMD IETNDTFSDE ENSBTAP00000017598/1-754 AIEDEVLEQL FKDTELELES EVKVQKQEED INVRKRLRLD KETNVTFNDE ENSTTRP00000012443/1-746 AIENEVLEQL LKNAKPELEI EVKVQKQEED VNIRKRPRLD IETNGPCNDE bmy_08037T0/1-716 AIEDEVLEQL FKNANPELEI EVKVQKQEED ---------- ---------- BACU009432/1-705 AIEDEVLEQL FKNANPELEI EVKVQKQEED VNIRKRPRLV IERNGTCNDE 651 700 ENSP00000265433/1-754 AVPESSKISQ ENEIGKKREL KEDSLWSAKE ISNNDKLQDD SEMLPKKLLL ENSBTAP00000017598/1-754 TIPESNKISQ ENEIKKKCEL KKESLWSTKE LSNNCELQDG DEMLPKKVLL ENSTTRP00000012443/1-746 AIPESNKISQ ENEIAKNCEL K--SLWSTKE LSNNDELQGD GEMLPKTVLL bmy_08037T0/1-716 ---------- ---------- ---------- --NNDELQDD GEILPKKVLL BACU009432/1-705 AIPESNKI-- ---------- ---------- -SNNDELQDD GEMLPKKVLL 701 750 ENSP00000265433/1-754 TEFRSLVIKN STSRNPSGIN DDYGQLKNFK KFKKVTYPGA GKLPHIIGGS ENSBTAP00000017598/1-754 TEFRSLVVCN STSRNASNVN NDYGELKNFK KFKKVTFPGA GKLPHIIGGS ENSTTRP00000012443/1-746 TEFRSLVVRN STSRNASSVN NDYGELKNFK KFKKVKFPGA GKLPHIIGGS bmy_08037T0/1-716 TEFRSLVVRN STSRNASSVN NDYGELKNFK KFKKVKFPGA GKLPHIIGGS BACU009432/1-705 TEFRSLVVRN STSRNASSVN NDYGELKNFK KFKKVKFPGA GKLPHIIGGS 751 800 ENSP00000265433/1-754 DLIAHHARKN TELEEWLRQE MEVQNQHAKE ESLADDLFRY NPYLKRRR ENSBTAP00000017598/1-754 DLIAHHARKN TELEEWLRQE MEVQNQHAKE DSLADDLFRY NPNVKRRR ENSTTRP00000012443/1-746 DLIAHHTRKT TELEEWLRQE MEVQNQHAKE ESLADELFRY NPNVKRRR bmy_08037T0/1-716 DLMAHHARKN TELEEWLRQE MEVS------ ---------- ------RK BACU009432/1-705 DLMAHHARKN TELEEWLRQE MEVS------ ---------- ------RK