KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:02:13 2014 Check: 00 .. Name: ENSP00000360312/1-320 Len: 351 Check: 3655 Weight: 1.00 Name: ENSBTAP00000017615/1-319 Len: 351 Check: 3976 Weight: 1.00 Name: ENSTTRP00000014719/1-319 Len: 351 Check: 1589 Weight: 1.00 Name: bmy_22561T0/1-269 Len: 351 Check: 7254 Weight: 1.00 Name: BACU000229/1-347 Len: 351 Check: 9879 Weight: 1.00 // 1 50 ENSP00000360312/1-320 MADEKTFRIG FIVLGLFLLA LGTFLMSHDR PQVYGTFYAM GSVMVIGGII ENSBTAP00000017615/1-319 MTDEKTFRIG FIVLGLFLLA LGTFLMSHDR PQVYGTFYAM GGVMVIGGVI ENSTTRP00000014719/1-319 MADEKTFRIG FIMLGLFLLA LGTFLMSHDR PQVYGTFYAM GGVMVIGGVI bmy_22561T0/1-269 MADEKTFRIG FIMLGLFLLA LGTFLMSHDR PQVYGTFYAV GGVMVIGGVI BACU000229/1-347 MADEKTFRIG FIMLGLFLLA LGTFLMSHDR PQVYGTFYAV GGVMVIGGVI 51 100 ENSP00000360312/1-320 WSMCQCYPK- ---------- ---------- --------IT FVPADSDFQG ENSBTAP00000017615/1-319 WSMCQCYPK- ---------- ---------- --------IT FIPADSDFQG ENSTTRP00000014719/1-319 WSMCQCYPK- ---------- ---------- --------IT FVPADSDFQG bmy_22561T0/1-269 WSMCQCYPK- ---------- ---------- --------IT FVPADSDFQG BACU000229/1-347 WSMCQCYPKC PKQRSPGEEG PGARAAHITT TSIVILLPIT FVPADSDFQG 101 150 ENSP00000360312/1-320 ILS--PKAMG LLENGLAAEM KSPSPQPPYV RLWEEAAYDQ SLPDFSHIQM ENSBTAP00000017615/1-319 VLSTKAKALG LLESGFAAEM K--SPQPPYV RLWEAAAYDQ SLPDFSHIQM ENSTTRP00000014719/1-319 ILS--PKALG LLENGLTAEM KXXSPR-PYV RLWEEAAYDQ SLPDSVHMQM bmy_22561T0/1-269 ILS--PKALG LLENGLTAEM R--SPRTPYV RLWEEAAYDQ SLPDFSHVRM BACU000229/1-347 ILS--PKALG LLENGLTAEM K--SPRTSYV RLWEEAAYDQ SLPDFSHVQM 151 200 ENSP00000360312/1-320 KVMSYSEDHR SLLAPEMGQP KLGTSDGGEG GPGDVQAWME AAVVIHKGSD ENSBTAP00000017615/1-319 KVMSYSEDPR PLLDPEPGQR QPGASDGGES GPHDPQTWLE ATVVIHRGSD ENSTTRP00000014719/1-319 KVMGYSEDPH PVLAHKPGRP QPGASDGGEG GPRDPQALLE AAVVIHRGSD bmy_22561T0/1-269 KVMGYSEDPH PVLAPKLGRP QPGASDGGEG GPRDPQGLLE AAVVIHRGSD BACU000229/1-347 KVMGYSEDPH PVLAPKPGRP QPGANDGGGG GPRDPQALLE AAVVIHRGSD 201 250 ENSP00000360312/1-320 ESEGERRLTQ SWPGPLACPQ GPAPLASFQD DLDMDSSEGS SPNASPHDRE ENSBTAP00000017615/1-319 QDEGEGDPSQ GRLSPPTCPQ GSAPLASFQD DLDVGSSEGS SPNPSPPEEA ENSTTRP00000014719/1-319 QDEGERDPSQ GRPGPLTCPQ GPAPLASFQD DLDVGSSEGS SPNLAPSEGA bmy_22561T0/1-269 QDEGERDPSQ GRPG------ ---------- ---------- ---------- BACU000229/1-347 QDEGERDPSQ GRPGPPTCPQ GPAPLASFQD DLDVGPSEGS SPNLVPSEGA 251 300 ENSP00000360312/1-320 EACSPQQEPQ GCRCPLDRFQ DFALIDAPTL EDEPQEGQQW EIALPNNWQR ENSBTAP00000017615/1-319 EPQPPPPESR TCRCQLDRFH DFALIDAPAT EDAPPEKQRW EAAVPSSQQR ENSTTRP00000014719/1-319 EPRPATPEPQ ACRCRLDRFH DFALIDAPAL EDVPPEKQLQ VAALPSSCQR bmy_22561T0/1-269 ---------- ---CRLDRFH DFALIDAPTL EGVPPEKQLQ VAALPSSWQR BACU000229/1-347 EPRPAPPEPQ ACRCRLDRFH DFALIDAPAL EGVPPEKQLQ VAALPSSWQR 301 350 ENSP00000360312/1-320 YPRTKVEEKE ASDTGGEEPE KEEEDLYYGL PDGAGDLLPD KELGFEPDTQ ENSBTAP00000017615/1-319 SPRTK-EEEE ASDTGTEGPA QEEEDLYYGL PDSPGDPLPD KELGFEPEAQ ENSTTRP00000014719/1-319 PPRTKWEEEE ASDAGTEEPE QEEEDLYYGL PDSPGDPLPD KELDFEPDAQ bmy_22561T0/1-269 PPRTKREEEE ASDAGTEELE QEEEDLYYGL PDSPGDPLPD KELGFEPDAQ BACU000229/1-347 PPRAKREEEE ASDAGTEEPE QEEEDLYYGL PDSPGDPLPD KELGFEPDAQ 351 400 ENSP00000360312/1-320 G ENSBTAP00000017615/1-319 G ENSTTRP00000014719/1-319 G bmy_22561T0/1-269 G BACU000229/1-347 G