KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:02:17 2014 Check: 00 .. Name: ENSTTRP00000012684/1-1023 Len: 1093 Check: 9596 Weight: 1.00 Name: bmy_02995T0/1-1010 Len: 1093 Check: 100 Weight: 1.00 Name: ENSP00000384863/1-1071 Len: 1093 Check: 6816 Weight: 1.00 Name: BACU013709/1-1071 Len: 1093 Check: 6961 Weight: 1.00 Name: ENSBTAP00000017629/1-1071 Len: 1093 Check: 6961 Weight: 1.00 // 1 50 ENSTTRP00000012684/1-1023 MPAIMTMLAD HAARQLLDFS QKLDINLLDN VVNCLYHGEG AQQRMAQEVL bmy_02995T0/1-1010 ---------- ---------- ---------- ---------- ---------- ENSP00000384863/1-1071 MPAIMTMLAD HAARQLLDFS QKLDINLLDN VVNCLYHGEG AQQRMAQEVL BACU013709/1-1071 MPAIMTMLAD HAARQLLDFS QKLDINLLDN VVNCLYHGEG AQQRMAQEVL ENSBTAP00000017629/1-1071 MPAIMTMLAD HAARQLLDFS QKLDINLLDN VVNCLYHGEG AQQRMAQEVL 51 100 ENSTTRP00000012684/1-1023 THLKEHPDAW TRVDTILEFS QNMNTKYYGL QILENVIKTR WKILPRNQCE bmy_02995T0/1-1010 ---------- ---------- ---------- ---MDKSRHN FGIFTEYEHE ENSP00000384863/1-1071 THLKEHPDAW TRVDTILEFS QNMNTKYYGL QILENVIKTR WKILPRNQCE BACU013709/1-1071 THLKEHPDAW TRVDTILEFS QNMNTKYYGL QILENVIKTR WKILPRNQCE ENSBTAP00000017629/1-1071 THLKEHPDAW TRVDTILEFS QNMNTKYYGL QILENVIKTR WKILPRNQCE 101 150 ENSTTRP00000012684/1-1023 GIKKYVVGLI IKTSSDPTCV EKEKVYIGKL NMILVQILKQ EWPKHWPTFI bmy_02995T0/1-1010 RIKKYVVGLI IKTSSDPTCV EKEKVYIGKL NMILVQILKQ EWPKHWPTFI ENSP00000384863/1-1071 GIKKYVVGLI IKTSSDPTCV EKEKVYIGKL NMILVQILKQ EWPKHWPTFI BACU013709/1-1071 GIKKYVVGLI IKTSSDPTCV EKEKVYIGKL NMILVQILKQ EWPKHWPTFI ENSBTAP00000017629/1-1071 GIKKYVVGLI IKTSSDPTCV EKEKVYIGKL NMILVQILKQ EWPKHWPTFI 151 200 ENSTTRP00000012684/1-1023 SDIVGASRTS ESLCQNNMVI LKLLSEEVFD FSSGQITQVK AKHLKDS--- bmy_02995T0/1-1010 SDIVGASRTS ESLCQNNMVI LKLLSEEVFD FSSGQITQVK AKHLKDRQVI ENSP00000384863/1-1071 SDIVGASRTS ESLCQNNMVI LKLLSEEVFD FSSGQITQVK SKHLKDS--- BACU013709/1-1071 SDIVGASRTS ESLCQNNMVI LKLLSEEVFD FSSGQITQVK AKHLKDS--- ENSBTAP00000017629/1-1071 SDIVGASRTS ESLCQNNMVI LKLLSEEVFD FSSGQITQVK AKHLKDS--- 201 250 ENSTTRP00000012684/1-1023 ---------- ---------M CNEFSQIFQL CQFVMENSQN APLVHATLET bmy_02995T0/1-1010 VLEFLSNFSS NFKEFGGRFM CNEFSQIFQL CQFVMENSQN APLVHATLET ENSP00000384863/1-1071 ---------- ---------M CNEFSQIFQL CQFVMENSQN APLVHATLET BACU013709/1-1071 ---------- ---------M CNEFSQIFQL CQFVMENSQN APLVHATLET ENSBTAP00000017629/1-1071 ---------- ---------M CNEFSQIFQL CQFVMENSQN APLVHATLET 251 300 ENSTTRP00000012684/1-1023 LLRFLNWIPL GYIFETKLIS TLIYKFLNVP MFRNVSLKCL TEIAGVSVSQ bmy_02995T0/1-1010 LLRFLNWIPL GYIFETKLIS TLIYKFLNVP MFRNVSLKCL TEIAGVSVSQ ENSP00000384863/1-1071 LLRFLNWIPL GYIFETKLIS TLIYKFLNVP MFRNVSLKCL TEIAGVSVSQ BACU013709/1-1071 LLRFLNWIPL GYIFETKLIS TLIYKFLNVP MFRNVSLKCL TEIAGVSVSQ ENSBTAP00000017629/1-1071 LLRFLNWIPL GYIFETKLIS TLIYKFLNVP MFRNVSLKCL TEIAGVSVSQ 301 350 ENSTTRP00000012684/1-1023 YEEQFVTLFT LTMMQLKQXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_02995T0/1-1010 YEEQFVTLFT LTMMQLKQML PLNTNIRLAY SNGKDDEQNF IQNLSLFLCT ENSP00000384863/1-1071 YEEQFVTLFT LTMMQLKQML PLNTNIRLAY SNGKDDEQNF IQNLSLFLCT BACU013709/1-1071 YEEQFVTLFT LTMMQLKQML PLNTNIRLAY SNGKDDEQNF IQNLSLFLCT ENSBTAP00000017629/1-1071 YEEQFVTLFT LTMMQLKQML PLNTNIRLAY SNGKDDEQNF IQNLSLFLCT 351 400 ENSTTRP00000012684/1-1023 XXXXXXXXXX XXXXXXXXXX XALHYMLLVS EVEETEIFKI CLEYWNHLAA bmy_02995T0/1-1010 FLKEHGQLIE KRLNLRETLM EALHYMLLVS EVEETEIFKI CLEYWNHLAA ENSP00000384863/1-1071 FLKEHDQLIE KRLNLRETLM EALHYMLLVS EVEETEIFKI CLEYWNHLAA BACU013709/1-1071 FLKEHGQLIE KRLNLRETLM EALHYMLLVS EVEETEIFKI CLEYWNHLAA ENSBTAP00000017629/1-1071 FLKEHGQLIE KRLNLRETLM EALHYMLLVS EVEETEIFKI CLEYWNHLAA 401 450 ENSTTRP00000012684/1-1023 ELYRESPFST SASPLLSGSQ HFDVPPRRQL YLPVLSKVRL LMVSRMAKPE bmy_02995T0/1-1010 ELYRESPFST SASPLLSGSQ HFDVPPRRQL YLPVLSKVRL LMVSRMAKPE ENSP00000384863/1-1071 ELYRESPFST SASPLLSGSQ HFDVPPRRQL YLPMLFKVRL LMVSRMAKPE BACU013709/1-1071 ELYRESPFST SASPLLSGSQ HFDVPPRRQL YLPVLSKVRL LMVSRMAKPE ENSBTAP00000017629/1-1071 ELYRESPFST SASPLLSGSQ HFDVPPRRQL YLPVLSKVRL LMVSRMAKPE 451 500 ENSTTRP00000012684/1-1023 EVLVVENDQG EVVREFMKDT DSINLYKNMR ETLVYLTHLD YVDTERIMTE bmy_02995T0/1-1010 EVLVVENDQG EVVREFMKDT DSINLYKNMR ETLVYLTHLD YVDTERIMTE ENSP00000384863/1-1071 EVLVVENDQG EVVREFMKDT DSINLYKNMR ETLVYLTHLD YVDTERIMTE BACU013709/1-1071 EVLVVENDQG EVVREFMKDT DSINLYKNMR ETLVYLTHLD YVDTERIMTE ENSBTAP00000017629/1-1071 EVLVVENDQG EVVREFMKDT DSINLYKNMR ETLVYLTHLD YVDTERIMTE 501 550 ENSTTRP00000012684/1-1023 KLHNQVNGTE WSWKNLNTLC WAIGSISGAM HEEDEKRFLV TVIKDLLGLC bmy_02995T0/1-1010 KLHNQVNGTE WSWKNLNTLC WAIGSISGAM HEEDEKRFLV TVIKDLLGLC ENSP00000384863/1-1071 KLHNQVNGTE WSWKNLNTLC WAIGSISGAM HEEDEKRFLV TVIKDLLGLC BACU013709/1-1071 KLHNQVNGTE WSWKNLNTLC WAIGSISGAM HEEDEKRFLV TVIKDLLGLC ENSBTAP00000017629/1-1071 KLHNQVNGTE WSWKNLNTLC WAIGSISGAM HEEDEKRFLV TVIKDLLGLC 551 600 ENSTTRP00000012684/1-1023 EQKRGKDNKA IIASNIMYIV GQYPRFLRAH WKFLKTVVNK LFEFMHETHD bmy_02995T0/1-1010 EQKRGKDNKA IIASNIMYIV GQYPRFLRAH WKFLKTVVNK LFEFMHETHD ENSP00000384863/1-1071 EQKRGKDNKA IIASNIMYIV GQYPRFLRAH WKFLKTVVNK LFEFMHETHD BACU013709/1-1071 EQKRGKDNKA IIASNIMYIV GQYPRFLRAH WKFLKTVVNK LFEFMHETHD ENSBTAP00000017629/1-1071 EQKRGKDNKA IIASNIMYIV GQYPRFLRAH WKFLKTVVNK LFEFMHETHD 601 650 ENSTTRP00000012684/1-1023 GVQDMACDTF IKIAQKCRRH FVQVQVGEVM PFIDEILNNI NTIICDLQPQ bmy_02995T0/1-1010 GVQDMACDTF IKIAQKCRRH FVQVQVGEVM PFIDEILNNI NTIICDLQPQ ENSP00000384863/1-1071 GVQDMACDTF IKIAQKCRRH FVQVQVGEVM PFIDEILNNI NTIICDLQPQ BACU013709/1-1071 GVQDMACDTF IKIAQKCRRH FVQVQVGEVM PFIDEILNNI NTIICDLQPQ ENSBTAP00000017629/1-1071 GVQDMACDTF IKIAQKCRRH FVQVQVGEVM PFIDEILNNI NTIICDLQPQ 651 700 ENSTTRP00000012684/1-1023 QVHTFYEAVG YMIGAQTDQT VQEHLIEKYM LLPNQVWDSI IQQATKNVDI bmy_02995T0/1-1010 QVHTFYEAVG YMIGAQTDQT VQEHLIEKYM LLPNQVWDSI IQQATKNVDI ENSP00000384863/1-1071 QVHTFYEAVG YMIGAQTDQT VQEHLIEKYM LLPNQVWDSI IQQATKNVDI BACU013709/1-1071 QVHTFYEAVG YMIGAQTDQT VQEHLIEKYM LLPNQVWDSI IQQATKNVDI ENSBTAP00000017629/1-1071 QVHTFYEAVG YMIGAQTDQT VQEHLIEKYM LLPNQVWDSI IQQATKNVDI 701 750 ENSTTRP00000012684/1-1023 LKDPETVKQL GSILKTNVRA CKAVGHPFVI QLGRIYLDML NVYKCLSENI bmy_02995T0/1-1010 LKDPETVKQL GSILKTNVRA CKAVGHPFVI QLGRIYLDML NVYKCLSENI ENSP00000384863/1-1071 LKDPETVKQL GSILKTNVRA CKAVGHPFVI QLGRIYLDML NVYKCLSENI BACU013709/1-1071 LKDPETVKQL GSILKTNVRA CKAVGHPFVI QLGRIYLDML NVYKCLSENI ENSBTAP00000017629/1-1071 LKDPETVKQL GSILKTNVRA CKAVGHPFVI QLGRIYLDML NVYKCLSENI 751 800 ENSTTRP00000012684/1-1023 SAAIQANGEM VTKQPLIRSM RTVKRETLKL ISGWVSRSND PQMVAENFVP bmy_02995T0/1-1010 SAAIQANGEM VTKQPLIRSM RTVKRETLKL ISGWVSRSND PQMVAENFVP ENSP00000384863/1-1071 SAAIQANGEM VTKQPLIRSM RTVKRETLKL ISGWVSRSND PQMVAENFVP BACU013709/1-1071 SAAIQANGEM VTKQPLIRSM RTVKRETLKL ISGWVSRSND PQMVAENFVP ENSBTAP00000017629/1-1071 SAAIQANGEM VTKQPLIRSM RTVKRETLKL ISGWVSRSND PQMVAENFVP 801 850 ENSTTRP00000012684/1-1023 PLLDAVLIDY QRNVPAAREP EVLSTMAIIV NKLGGHITAE IPQIFDAVFE bmy_02995T0/1-1010 PLLDAVLIDY QRNVPAAREP EVLSTMAIIV NKLGGHITAE IPQIFDAVFE ENSP00000384863/1-1071 PLLDAVLIDY QRNVPAAREP EVLSTMAIIV NKLGGHITAE IPQIFDAVFE BACU013709/1-1071 PLLDAVLIDY QRNVPAAREP EVLSTMAIIV NKLGGHITAE IPQIFDAVFE ENSBTAP00000017629/1-1071 PLLDAVLIDY QRNVPAAREP EVLSTMAIIV NKLGGHITAE IPQIFDAVFE 851 900 ENSTTRP00000012684/1-1023 CTLNMINKXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_02995T0/1-1010 CTLNMINKDF EEYPEHRTNF FLLLQAVNSH CFPAFLAIPP AQFKLVLDSI ENSP00000384863/1-1071 CTLNMINKDF EEYPEHRTNF FLLLQAVNSH CFPAFLAIPP TQFKLVLDSI BACU013709/1-1071 CTLNMINKDF EEYPEHRTNF FLLLQAVNSH CFPAFLAIPP AQFKLVLDSI ENSBTAP00000017629/1-1071 CTLNMINKDF EEYPEHRTNF FLLLQAVNSH CFPAFLAIPP AQFKLVLDSI 901 950 ENSTTRP00000012684/1-1023 XXXXXXXXXX XXXXXLQILF TLLQNVAQEE AAAQSFYQTY FCDILQHIFS bmy_02995T0/1-1010 IWAFKHTMRN VADTGLQILF TLLQNVAQEE AAAQSFYQTY FCDILQHIFS ENSP00000384863/1-1071 IWAFKHTMRN VADTGLQILF TLLQNVAQEE AAAQSFYQTY FCDILQHIFS BACU013709/1-1071 IWAFKHTMRN VADTGLQILF TLLQNVAQEE AAAQSFYQTY FCDILQHIFS ENSBTAP00000017629/1-1071 IWAFKHTMRN VADTGLQILF TLLQNVAQEE AAAQSFYQTY FCDILQHIFS 951 1000 ENSTTRP00000012684/1-1023 VVTDTSHTAG LTMHASILAY MFNLVEEGKI STPLNPGNPV NNQMFIQEYV bmy_02995T0/1-1010 VVTDTSHTAG LTMHASILAY MFNLVEEGKI STPLNPGNPV NNQMFIQEYV ENSP00000384863/1-1071 VVTDTSHTAG LTMHASILAY MFNLVEEGKI STSLNPGNPV NNQIFLQEYV BACU013709/1-1071 VVTDTSHTAG LTMHASILAY MFNLVEEGKI STPLNPGNPV NNQMFIQEYV ENSBTAP00000017629/1-1071 VVTDTSHTAG LTMHASILAY MFNLVEEGKI STPLNPGNPV NNQMFIQEYV 1001 1050 ENSTTRP00000012684/1-1023 ANLLKSAFPH LQDAQVKLFV TGLFSLNQDI PAFKEHLRDF LVQIK----- bmy_02995T0/1-1010 ANLLKSAFPH LQDAQVKLFV TGLFSLNQDI PAFKEHLRDF LVQIKEFAGE ENSP00000384863/1-1071 ANLLKSAFPH LQDAQVKLFV TGLFSLNQDI PAFKEHLRDF LVQIKEFAGE BACU013709/1-1071 ANLLKSAFPH LQDAQVKLFV TGLFSLNQDI PAFKEHLRDF LVQIKEFAGE ENSBTAP00000017629/1-1071 ANLLKSAFPH LQDAQVKLFV TGLFSLNQDI PAFKEHLRDF LVQIKEFAGE 1051 1100 ENSTTRP00000012684/1-1023 ---------- ---------- ---------- ---------- --- bmy_02995T0/1-1010 DTSDLFLEER ETALRQAQEE KHKLQMSVPG ILNPHEIPEE MCD ENSP00000384863/1-1071 DTSDLFLEER EIALRQADEE KHKRQMSVPG IFNPHEIPEE MCD BACU013709/1-1071 DTSDLFLEER ETALRQAQEE KHKLQMSVPG ILNPHEIPEE MCD ENSBTAP00000017629/1-1071 DTSDLFLEER ETALRQAQEE KHKLQMSVPG ILNPHEIPEE MCD