KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:02:18 2014 Check: 00 .. Name: ENSP00000266674/1-907 Len: 919 Check: 8790 Weight: 1.00 Name: ENSBTAP00000017631/1-907 Len: 919 Check: 6544 Weight: 1.00 Name: bmy_13480T0/1-752 Len: 919 Check: 7268 Weight: 1.00 Name: BACU016424/1-717 Len: 919 Check: 5377 Weight: 1.00 Name: ENSTTRP00000006933/1-890 Len: 919 Check: 1281 Weight: 1.00 // 1 50 ENSP00000266674/1-907 MDTSRLGVLL SLPVLLQLAT GGSSPRSGVL LRGCPTHCHC EPDGRMLLRV ENSBTAP00000017631/1-907 MDTSSVGVLL SLPVLLQLAA GGGSPRPGTL LRGCPAHCQC EPDGRMLLRV bmy_13480T0/1-752 ---------- ---------- ---------- ---------- ---------- BACU016424/1-717 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006933/1-890 ---------- -----LQLAA GGGSPRPGAL QRGNQAH-QC EPDGRMLLRG 51 100 ENSP00000266674/1-907 DCSDLGLSEL PSNLSVFTSY LDLSMNNISQ LLPNPLPSLR FLEELRLAGN ENSBTAP00000017631/1-907 DCSDLGLSEL PSNLSVFTSY LDLSMNNISQ LPPSPLHSLR FLEELRLAGN bmy_13480T0/1-752 ---------- -----MLSTR LEENHGTVEF YSSGSTHE-- ---------- BACU016424/1-717 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006933/1-890 DCSDLGLSEL PSNLSVFTSY QDLSMNNISQ LPPNPLHGLR FLEELRLAGN 101 150 ENSP00000266674/1-907 ALTYIPKGAF TGLYSLKVLM LQNNQLRHVP TEALQNLRSL QSLRLDANHI ENSBTAP00000017631/1-907 ALTYIPKGAF AGLYSLKVLM LQNNHLRQVP TEALQNLRSL QSLRLDANRI bmy_13480T0/1-752 ---------- ---------- ---------- ---------- ---RLDANHI BACU016424/1-717 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006933/1-890 ALTYIPKGAF AGLYSLKVLM LQNNHLRQVP TEALQNLRSL QSLRLDANHI 151 200 ENSP00000266674/1-907 SYVPPSCFSG LHSLRHLWLD DNALTEIPVQ AFRSLSALQA MTLALNKIHH ENSBTAP00000017631/1-907 SSVPPSCFSG LHSLRHLWLD DNALTEIPVQ AFRSLSALQA MTLALNKIHH bmy_13480T0/1-752 SSVPPSCFSG LYSLRHLWLD DNALTEIPVQ ALRSLSALQA MTLALNKIHH BACU016424/1-717 ---------- ---------- ---------- ---------- MTLALNKIHH ENSTTRP00000006933/1-890 SSVPPSCFSG LYSLRHLWLD DNSLTEIPVQ AFRSLSALQA VTLALNKIHH 201 250 ENSP00000266674/1-907 IPDYAFGNLS SLVVLHLHNN RIHSLGKKCF DGLHSLETLD LNYNNLDEFP ENSBTAP00000017631/1-907 IPDYAFGNLS SLVVLHLHNN RIHSLGKKCF DGLHSLETLD LNYNNLDEFP bmy_13480T0/1-752 IPDYAFRNLS SLVVLHLHNN RIHSLGKKCF DGLHSLETLD LNYNNLDEFP BACU016424/1-717 IPDYAFRNLS SLVVLHLHNN RIHSLGKKCF DGLHSLETLD LNYNNLDEFP ENSTTRP00000006933/1-890 IPDYAFRNLS SLVVLHLHNN RIHSLGKKCF DGLHSLETLD LNYNNLDEFP 251 300 ENSP00000266674/1-907 TAIRTLSNLK ELGFHSNNIR SIPEKAFVGN PSLITIHFYD NPIQFVGRSA ENSBTAP00000017631/1-907 TAVRTLSNLK ELGFHSNNIK SIPEKAFVGN PSLITIHFYD NPIQLVGRSA bmy_13480T0/1-752 TAIRTLSNLK ELGFHSNNIK SIPEKAFVGN PSLIT----- ---------- BACU016424/1-717 TAIRTLSNLK ELGFHSNNIK SIPEKAFVGN PSLITIHFYD NPIQVVGRSA ENSTTRP00000006933/1-890 TAIRTLSNLK ELGFHSNNIK SIPEKAFVGN PSLITIHF-D NPMQVVGRSA 301 350 ENSP00000266674/1-907 FQHLPELRTL TLNGASQITE FPDLTGTANL ESLTLTGAQI SSLPQTVCNQ ENSBTAP00000017631/1-907 FQHLPELRTL TLNGASQITE FPDLTGTASL ESLTLTGAQI SSLPQTVCDQ bmy_13480T0/1-752 ---------- ---------- ---------- --MTLTGAQI SSLPQTVCDQ BACU016424/1-717 FQHLPELRTL TLNGASQITE FPDLTGTASL ESLTLTGAQI SSLPQTVCDQ ENSTTRP00000006933/1-890 FQHLPELRIL TLNGASQITE FPDLTGTASL ESLTLTGAQI SSLPQTVCDQ 351 400 ENSP00000266674/1-907 LPNLQVLDLS YNLLEDLPSF SVCQKLQKID LRHNEIYEIK VDTFQQLLSL ENSBTAP00000017631/1-907 LPNLQVLDLS YNLLEDLPSF SVCQKLQKID LRHNEIYEIQ ADTFQQLFSL bmy_13480T0/1-752 LPNLQALDLS YNLLEDLPSF SVCQKLQKID LRHNEMCEIR ANTFQQLFSL BACU016424/1-717 LPNLQALDLS YNLLEDLPSF SVCQKLQKID LRHNEMCEIR ANTFQQLFSL ENSTTRP00000006933/1-890 LPNLQVLDLS YNLIEDLPSF SVCRKLQKID LRHNEMCEIR ANTFQQLFSL 401 450 ENSP00000266674/1-907 RSLNLAWNKI AIIHPNAFST LPSLIKLDLS SNLLSSFPIT GLHGLTHLKL ENSBTAP00000017631/1-907 RSLNLAWNKI AIIDPNAFST LPSLRKLDLS SNRLSSIPVT GLHGLTHLKL bmy_13480T0/1-752 RSLNLAWNKI AIIHPNAFST LPSLRKLDLS SNRLSSFPVT GLHGLTHLKL BACU016424/1-717 RSLNLAWNKI AIIHPNAFST LPSLRKLDLS SNRLSSFPVT GLHGLTHLKL ENSTTRP00000006933/1-890 RSLNLAWNKI AIIHPNAFST LPSLRKLDLS SNRLSSFPVT GLHGLTHLKL 451 500 ENSP00000266674/1-907 TGNHALQSLI SSENFPELKV IEMPYAYQCC AFGVCENAYK ISNQWNKGDN ENSBTAP00000017631/1-907 TGNHALQSLI SSENFPELKV IEMPYAYQCC AFGVCENVYK ISNPWSKGDN bmy_13480T0/1-752 TGNHALQSLI SSENFPELKV IEMPYAYQCC AFGVCENVYK ISNQWTKGDN BACU016424/1-717 TGNHALQSLI SSENFPELKV IEMPYAYQCC AFGVCENVYK ISNQWTKGDN ENSTTRP00000006933/1-890 TGNHALQSLI SSENFPELKV IEMPYAYQCC AFGVCENVYK ISNQWNKGDN 501 550 ENSP00000266674/1-907 SSMD------ --DLHKKD-- --AGMFQAQD ERDLEDFLLD FEEDLKALHS ENSBTAP00000017631/1-907 STAE------ --DLHKKD-- --AGVFQVQD ERDLEDFLLD FEEDLRALHP bmy_13480T0/1-752 SRQSRTLLPG SWSLKRETEL IIPELLIPAD ERDLEDFLLD FEEDLKALHS BACU016424/1-717 SSAD------ --DLHKKD-- --AGMFQVQD ERDLEDFLLD FEEDLKALHS ENSTTRP00000006933/1-890 SSAD------ --DLHKKD-- --PGMLQVQD ERDLEDFLLD FEEDLKALHS 551 600 ENSP00000266674/1-907 VQCSPSPGPF KPCEHLLDGW LIRIGVWTIA VLALTCNALV TSTVFRSPLY ENSBTAP00000017631/1-907 VRCSPSPGPF KLCEYLFGSW LIRIGVWTIA VLALTCNALV TSTVFRAAVY bmy_13480T0/1-752 VQCSPSPGPF KLCEYLFGSW LIRIGVWTIA VLALTCNALV TSTVFRAPLY BACU016424/1-717 VQCSPSPGPF KLCEYLFGSW LIRIGVWTIA VLALTCNALV TSTVFRAPLY ENSTTRP00000006933/1-890 VQCSPSPGPF KLCEYLFGSW LIRIGVWTIA VLALTCNALV TSTVFRAPLY 601 650 ENSP00000266674/1-907 ISPIKLLIGV IAAVNMLTGV SSAVLAGVDA FTFGSFARHG AWWENGVGCH ENSBTAP00000017631/1-907 ISSIKLLIGL IAAVNMLMGV SSAVLAGVDA FTFGSFAQHG AWWEQAVGCQ bmy_13480T0/1-752 ISSVKLLIGL IAVVNMLTGV SSAVLAGVDA FTFGSFAQHG AWWEQGVGCQ BACU016424/1-717 ISSVKLLIGL IAVVNMVTGV SSAVLAGVDA FTFGSFAQHG AWWEQGVGCQ ENSTTRP00000006933/1-890 ISSVKLLIGL IAVVNMLTGV SSAVLAGVDA FTFGSFAQHG AWWEQGVGCQ 651 700 ENSP00000266674/1-907 VIGFLSIFAS ESSVFLLTLA ALERGFSVKY SAKFETKAPF SSLKVIILLC ENSBTAP00000017631/1-907 VVGFLSIFAS ESSVFLLTLA ALERGWSVKC SAKFETQTPF PSLRATLALC bmy_13480T0/1-752 VVGFLSIFAS ESSVFLLTLA ALERGFSVKC SAKFETKTPF SSLKAIVVLC BACU016424/1-717 VVGFLSIFAS ESSVFLLTLA ALERGFSVKC SAKFETKTPF SSLKAIVVLC ENSTTRP00000006933/1-890 VVGFLSIFAS ESSVFLLTLA ALERGFSVKC SAKFETKTPF SSLKAIVALC 701 750 ENSP00000266674/1-907 ALLALTMAAV PLLGGSKYGA SPLCLPLPFG EPSTMGYMVA LILLNSLCFL ENSBTAP00000017631/1-907 ALLAGTVAAV PLLGGSEYSA SPLCLPLPFG EPRATGYMVA LVLLNSLCFL bmy_13480T0/1-752 AVLAVTIAAV PLLGGSEYSA SPLCLPLPFG EPSATGYMVA LVLLNSLCFL BACU016424/1-717 AVLAVTVAAV PLLGGSEYSA SPLCLPLPFG EPSATGYMVA LVLLNSLCFL ENSTTRP00000006933/1-890 AMLAATIAAV PLLGGSEYSA SPLCLPLPFG EPSATGYMVA LVLLNSLCFL 751 800 ENSP00000266674/1-907 MMTIAYTKLY CNLDKGDLEN IWDCSMVKHI ALLLFTNCIL NCPVAFLSFS ENSBTAP00000017631/1-907 VMTVAYTRLY CHLEKGDLES MWDCSMVKHV ALLLFTNCIL HCPVAFLSFS bmy_13480T0/1-752 VMTIAYTKLY CNLEKGDLEN IWDCSMVKHI ALLLFTNCIL YCPVAFLSFS BACU016424/1-717 VMTIAYTKLY CNLEKGDLEN IWDCSMVKHI ALLLFTNCIL YCPVAFLSFS ENSTTRP00000006933/1-890 VMTIAYTKLY CNLEKGDLEN IWDCSMVKHI ALLLFTNCIL YCPVAFLSFS 801 850 ENSP00000266674/1-907 SLINLTFISP EVIKFILLVV VPLPACLNPL LYILFNPHFK EDLVSLRKQT ENSBTAP00000017631/1-907 SLLNLTFISP EVIKFILLVI VPLPACLNPL LYILFNPHFK EDLGSLGKQT bmy_13480T0/1-752 SLLNLTFISP EVIKFILLVI VPLPACLNPL LYILFNPHFK EDLGSLGKQT BACU016424/1-717 SLLNLTFISP EVIKFILLVI VPLPACLNPL LYILFNPHFK EDLGSLGKQT ENSTTRP00000006933/1-890 SLLNLTFISP EVIKFILLVI VPLPACLNPL LYILFNPHFK EDLGSLGKQT 851 900 ENSP00000266674/1-907 YVWTRSKHPS LMSINSDDVE KQSCDSTQAL VTFTSSSITY DLPPSSVPSP ENSBTAP00000017631/1-907 HFWTRSKHTS LMSINSDDVE KQSCDSTQAL VTFTSASIAY DLPSSSGSPP bmy_13480T0/1-752 HFWTRAKHTS LMSINSDDVE KQSCDSTQAL VTFTSASRAY DLPSNSGSPP BACU016424/1-717 HFWTRAKHTS LMSINSDDVE KQSCDSTQAL VTFASASRAY DLPSNSGSPP ENSTTRP00000006933/1-890 HFWTRSKHTS LMSINSDDVE KQSCDSTQAL VTFTSASRAY NLPSNSGSPP 901 950 ENSP00000266674/1-907 AYPVTESCHL SSVAFVPCL ENSBTAP00000017631/1-907 AYPMTESCHL SSVAFVPCL bmy_13480T0/1-752 AYPMTESCHL SSVAFVPCL BACU016424/1-717 AYPMTESCHL SSVAFVPCL ENSTTRP00000006933/1-890 AYPMTESCHL SSVAFVPCL