KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:02:19 2014 Check: 00 .. Name: ENSTTRP00000002625/1-453 Len: 473 Check: 7358 Weight: 1.00 Name: ENSP00000274545/1-453 Len: 473 Check: 9495 Weight: 1.00 Name: ENSBTAP00000017637/1-453 Len: 473 Check: 8416 Weight: 1.00 Name: bmy_19647T0/1-470 Len: 473 Check: 8574 Weight: 1.00 Name: BACU003712/1-453 Len: 473 Check: 8753 Weight: 1.00 // 1 50 ENSTTRP00000002625/1-453 MASPLPWLYI ILW------- ---------- ---VENALGK LEDEGNFYSR ENSP00000274545/1-453 MASSLPWLCI ILW------- ---------- ---LENALGK LEVEGNFYSE ENSBTAP00000017637/1-453 MVSPLPCLYI VLW------- ---------- ---VENALGK LEDEGNFYSK bmy_19647T0/1-470 ---MYVWWGR RGWNEQPIFS EARSEGHGLS THRVENALGK PEDEGNVYSR BACU003712/1-453 MASPLPWLYI ILW------- ---------- ---AENALGK LEDEGNVYSR 51 100 ENSTTRP00000002625/1-453 NISRILDNLL EGYDNRLRPG FGGAVTEVKT DIYVTSFGPV SDVEMEYTMD ENSP00000274545/1-453 NVSRILDNLL EGYDNRLRPG FGGAVTEVKT DIYVTSFGPV SDVEMEYTMD ENSBTAP00000017637/1-453 NISRILDNLL EGYDNRLRPG FGGAVTEVKT DIYVTSFGPV SDVEMEYTMD bmy_19647T0/1-470 NISRILDNLL EGYDNRLRPG FGGAVTEVKT DIYVTSFGPV SDVEMEYTMD BACU003712/1-453 NISRILDNLL EGYDNRLRPG FGGAVTEVKT DIYVTSFGPV SDVEMEYTMD 101 150 ENSTTRP00000002625/1-453 VFFRQTWTDE RLKFGGPAEI LSLNNLMVSK IWTPDTFFRN GKKSIAHNMT ENSP00000274545/1-453 VFFRQTWTDE RLKFGGPTEI LSLNNLMVSK IWTPDTFFRN GKKSIAHNMT ENSBTAP00000017637/1-453 VFFRQTWTDE RLKFGGPTEI LSLNNLMVSK IWTPDTFFRN GKKSIAHNMT bmy_19647T0/1-470 VFFRQTWTDE RLKFGGPAEI LSLNNLMVSK IWTPDTFFRN GKKSIAHNMT BACU003712/1-453 VFFRQTWTDE RLKFGGPAEI LSLNNLMVSK IWTPDTFFRN GKKSIAHNMT 151 200 ENSTTRP00000002625/1-453 TPNKLXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXAYP ENSP00000274545/1-453 TPNKLFRIMQ NGTILYTMRL TINADCPMRL VNFPMDGHAC PLKFGSYAYP ENSBTAP00000017637/1-453 TPNKLFRIMQ NGTILYTMRL TINADCPMKL VNFPMDGHAC PLKFGSYAYP bmy_19647T0/1-470 TPNKLFRIMQ NGTILYTMRL TINADCPMRL VNFPMDGHAC PLKFGSYAYP BACU003712/1-453 TPNKLFRIMQ NGTILYTMRL TINADCPMRL VNFPMDGHAC PLKFGSYAYP 201 250 ENSTTRP00000002625/1-453 KSEIIYTWKK GPLYSVEVPE ESSSLLQYDL IGQTVSSETI KSNTGEYVIM ENSP00000274545/1-453 KSEIIYTWKK GPLYSVEVPE ESSSLLQYDL IGQTVSSETI KSNTGEYVIM ENSBTAP00000017637/1-453 KSEIIYTWKK GPLYSVEVPE ESSSLLQYDL IGQTVSSETI KSNTGEYVIM bmy_19647T0/1-470 KSEIIYTWKK GPLYSVEVPE ESSSLLQYDL IGQTVSSETI KSNTGEYVIM BACU003712/1-453 KSEIIYTWKK GPLYSVEVPE ESSSLLQYDL IGQTVSSETI KSNTGEYVIM 251 300 ENSTTRP00000002625/1-453 TVYFHLQRKM GYFMIQIYTP CIMTVILSQV SFWINKESVP ARTVFGITTV ENSP00000274545/1-453 TVYFHLQRKM GYFMIQIYTP CIMTVILSQV SFWINKESVP ARTVFGITTV ENSBTAP00000017637/1-453 TVYFHLQRKM GYFMIQIYTP CIMTVILSQV SFWINKESVP ARTVFGITTV bmy_19647T0/1-470 TVYFHLQRKM GYFMIQIYTP CIMTVILSQV SFWINKESVP ARTVFGITTV BACU003712/1-453 TVYFHLQRKM GYFMIQIYTP CIMTVILSQV SFWINKESVP ARTVFGITTV 301 350 ENSTTRP00000002625/1-453 LTMTTLSISA RHSLPKVSYA TAMDWFIAVC FAFVFSALIE FAAVNYFTNL ENSP00000274545/1-453 LTMTTLSISA RHSLPKVSYA TAMDWFIAVC FAFVFSALIE FAAVNYFTNL ENSBTAP00000017637/1-453 LTMTTLSISA RHSLPKVSYA TAMDWFIAVC FAFVFSALIE FAAVNYFTNL bmy_19647T0/1-470 LTMTTLSISA RHSLPKVSYA TAMDWFIAVC FAFVFSALIE FAAVNYFTNL BACU003712/1-453 LTMTTLSISA RHSLPKVSYA TAMDWFIAVC FAFVFSALIE FAAVNYFTNL 351 400 ENSTTRP00000002625/1-453 QTQKAKRKAQ IAASPPVTIA KATEPLEAEI VLHPDSKYYL KKRITSLTLP ENSP00000274545/1-453 QTQKAKRKAQ FAAPPTVTIS KATEPLEAEI VLHPDSKYHL KKRITSLSLP ENSBTAP00000017637/1-453 QTQKAKRKAQ IAASPPVTIA KATEPLEAEI VLHPDSKYHL KKRITSLTLP bmy_19647T0/1-470 QTQKAKRKAQ IAASPPVTIA KATEPLEAEF VLHPDSKYHL KKRITSLTLP BACU003712/1-453 HTQKAKRKAQ IAASPPVTIA KATEPLEAEI VLHSDSKYHL KKRITSLTLP 401 450 ENSTTRP00000002625/1-453 IVPSSKASTV LTRAPILQST PVTPPPLSPT FAGTSKIDQY SRILFPVAFA ENSP00000274545/1-453 IVSSSEANKV LTRAPILQST PVTPPPLSPA FGGTSKIDQY SRILFPVAFA ENSBTAP00000017637/1-453 IVPSPEASKV LTRAPILQST PVTPPPVSLT FGGTSKIDQY SRILFPVAFA bmy_19647T0/1-470 IVPSPKASTV LTRAPILQST PVTPPPLSPT FGGTSKIDQY SRILFPVAFA BACU003712/1-453 IVPSPKASTV LTRAPILPST PVTPPPLSPT FGGTSKIDQY SRILFPVAFA 451 500 ENSTTRP00000002625/1-453 GFNLVYWIVY LSKDTMEVSS SVE ENSP00000274545/1-453 GFNLVYWVVY LSKDTMEVSS SVE ENSBTAP00000017637/1-453 GFNLVYWIVY LSKDTMEVSN SVE bmy_19647T0/1-470 GFNLVYWIVY LSKDTMEVSS SVD BACU003712/1-453 GFNLVYWIVY LSKDTMEVSS SVE