KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:02:22 2014 Check: 00 .. Name: bmy_10712T0/1-181 Len: 312 Check: 3514 Weight: 1.00 Name: ENSP00000225609/1-252 Len: 312 Check: 7561 Weight: 1.00 Name: ENSBTAP00000017653/1-253 Len: 312 Check: 6092 Weight: 1.00 Name: BACU005239/1-284 Len: 312 Check: 4749 Weight: 1.00 Name: ENSTTRP00000001902/1-253 Len: 312 Check: 6927 Weight: 1.00 // 1 50 bmy_10712T0/1-181 ---------- ---------- --------MS APSPGHEPKP PERVVF---R ENSP00000225609/1-252 -MEAMWLLCV ALAVLAWGFL WVWDSSERMK SREQGGRLGA ESRTLLVIAH ENSBTAP00000017653/1-253 MEVAAPLLCL AAAVLVWGVL WVWGSWERMT RPEQAGLPGG GSRTLLVTAH BACU005239/1-284 ---------- ---------- --------MK SPEQAGLPGA GSRTLLVTAH ENSTTRP00000001902/1-253 MEVVGLLLCV AAAVLTWGFL WVWDSWERMK SPEQAGLPGG GSRTLLVTAH 51 100 bmy_10712T0/1-181 PDAAASPLPP TPTG------ ---------- ---APGEA-- ------CT-- ENSP00000225609/1-252 PDDEAMFFAP TVLGLARLRH WVYLLCFSAG NYYNQGETRK KELLQSCDVL ENSBTAP00000017653/1-253 PDDEAMFFAP TILGLARLRH QLFLLCFSAG NYYNQGEIRK KELLQSCDVL BACU005239/1-284 PDDEAMFFAP TVLGLARLRH QVSLLCFSSG NYYNQGEIRK KELLQSCDVL ENSTTRP00000001902/1-253 PDDEAMFFAP TVLGLVRMRH QVSLLCFSAG NYYNQGETRK KELLQSCDVL 101 150 bmy_10712T0/1-181 ---------- ---------- ---------- ---------- ---------- ENSP00000225609/1-252 GIPLSSVMII DN-------- ---------- ---------- ---------- ENSBTAP00000017653/1-253 GIPPSNVMII EN-------- ---------- ---------- ---------- BACU005239/1-284 GIPPSNVMII DNSANQRVLV PLRMVKLDFE GLSNPAKSRC KIYSFSAIPF ENSTTRP00000001902/1-253 GIPPSNVMII DN-------- ---------- ---------- ---------- 151 200 bmy_10712T0/1-181 ---------- ---------- -GDFPDDPGV RWDTERVADV LLRHVEASRI ENSP00000225609/1-252 ---------- ---------- -RDFPDDPGM QWDTEHVARV LLQHIEVNGI ENSBTAP00000017653/1-253 ---------- ---------- -RDFPDDPDV RWDPDRAADV LLQHVEANGI BACU005239/1-284 SLSPSNPVSS LTLEITVFRR KRDFPDDPGV RWDTERVADV LLRHVEADRI ENSTTRP00000001902/1-253 ---------- ---------- -RDFPDDPGV WWDTERVADV LLRHVEASRI 201 250 bmy_10712T0/1-181 NLVVTFDAGG VSGHSNHVAL YAAARTLHAE GKLPKGCSVL TLRSVNLLRK ENSP00000225609/1-252 NLVVTFDAGG VSGHSNHIAL YAAVRALHSE GKLPKGCSVL TLQSVNVLRK ENSBTAP00000017653/1-253 KLVVTFDEGG VSGHSNHVAL NAAVRTLQAE GKLPKGCSVL TLQSVNLLRK BACU005239/1-284 NLVVTFDAGG VSGHSNHAAL YAAARTLHAE GKLPKGCSVL TLQSVNLLRK ENSTTRP00000001902/1-253 NLVVTFDAGG VSGHSNHVAL YAAARTLHAQ GKLPKGCSVL TLQSVNLLRK 251 300 bmy_10712T0/1-181 YLSLLDLPCS LLLARDALFV LSHREVAQAQ RAMSCHRSQL LWFRHLYVLF ENSP00000225609/1-252 YISLLDLPLS LLHTQDVLFV LNSKEVAQAK KAMSCHRSQL LWFRRLYIIF ENSBTAP00000017653/1-253 YLCLLDLPCS LLLARDALFV LTQREAAQAQ RAMSCHRSQL LWFRRLYMLF BACU005239/1-284 YLSLLDLPCS LLLARDALFV LSRREVAQAQ KAMSCHRSQL LWFRHLYMLF ENSTTRP00000001902/1-253 YLSLLDLPCS LLCARDALFV LSRREAAQAQ RAMSCHRSQL LWFRHLYVLF 301 350 bmy_10712T0/1-181 SRYMRINSLH FL ENSP00000225609/1-252 SRYMRINSLS FL ENSBTAP00000017653/1-253 SRYMRINSLN FL BACU005239/1-284 SRYMRINSLH FL ENSTTRP00000001902/1-253 SRYMRINSLH FL