KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:02:22 2014 Check: 00 .. Name: ENSP00000410804/1-782 Len: 786 Check: 1742 Weight: 1.00 Name: ENSBTAP00000017658/1-784 Len: 786 Check: 7995 Weight: 1.00 Name: BACU012629/1-401 Len: 786 Check: 4047 Weight: 1.00 Name: bmy_07176T0/1-420 Len: 786 Check: 9169 Weight: 1.00 Name: ENSTTRP00000003853/1-784 Len: 786 Check: 1886 Weight: 1.00 // 1 50 ENSP00000410804/1-782 MSINLTVDIY -IYLLSNARS VCGKQRSKQL YFLFSPKHYW RISHISLQRG ENSBTAP00000017658/1-784 MSINLTIDLY YIYLLSNARS LCGKQRSKQL PFLCSPEHYW RISHISLQRG BACU012629/1-401 ---------- ---------- -------MQT LHLPTP---- ---------- bmy_07176T0/1-420 MSVNLTISLY YIYLLSNARS LCGKQRSKQL PFLCSPKXFW RISHVSLQRG ENSTTRP00000003853/1-784 MSVNLTVGLY YIYLLSNTRS LCGKQRSKQL PFLCSPKHYW RISHSSLQRG 51 100 ENSP00000410804/1-782 FHTNIIRCKW TKSEAHSCSK HCYSPSNHGL HIGILKLSTS APKGLTKVNI ENSBTAP00000017658/1-784 VHMSRIRCKW TKSEAHSCSK HCSPLSHHGL HLAVLRLSTS APKGLTKVSP BACU012629/1-401 ---------- ---------- ---------- ---------- ---------- bmy_07176T0/1-420 FHTSXIRCKW TKXEAHSCSK HCYSPSNHGL RFGILKLSTS APKGLTKASL ENSTTRP00000003853/1-784 FHTSKIRCKW TKSEAHSCSK HCYSPSNHGL HFGILKLSTS APKGLTKASL 101 150 ENSP00000410804/1-782 CMSRIKSTLN SVSKAVFGNQ NEMISRLAQF KPSSQILRKV SDSGWLKQKN ENSBTAP00000017658/1-784 RMSRIKNTLN SVSKAVFGKQ NEMISRLAQL KPSSRILRKV TDSGWLKQKS BACU012629/1-401 ---------- ---------- ---------- -PSSRV---- ---------- bmy_07176T0/1-420 CMSRIKNTLN SFSKAVFGKQ NEMISRLAQL KPSPRILRKV SDSGWLKQKN ENSTTRP00000003853/1-784 RMSRIKNTLN AVSKAVFGKQ NEMISLLAQL KPSSRILRKL SDSGW-KQKN 151 200 ENSP00000410804/1-782 IKQAIKSLKK YSDKSAEKSP FPEEKSHIID KEEDIGKRSL FHYTSSITTK ENSBTAP00000017658/1-784 VKQTIKFLKK YSDKSAEKSS IPAKESQVIE K-DDIGKPSL FHYTSNITTK BACU012629/1-401 ---------- ---------- ---------- ---------- ---------- bmy_07176T0/1-420 IKQTIKFLKK YSNKSAEKGS FAAKESHVME K-EDXGKQSL FHYTNNLTTK ENSTTRP00000003853/1-784 IKQTITFLKK YSNKLAEKDS FAAKESHVME K-EDTGKQSL FHYTNNLTTK 201 250 ENSP00000410804/1-782 FGDSFYFLSN HINSYFKRKE KMSQQKENEH FRDKSELEDK KVE-EGKLRS ENSBTAP00000017658/1-784 FGESFYFLSS HINSYFKREE KMSQQKEDQH FQEKSELELK KVE-DEKPSS BACU012629/1-401 ---------- ---------- ---------- ---------- ---------- bmy_07176T0/1-420 FGESFYFLSS HINSYFKREE KMSEQKEDKH FQDKSELELK KTE-DEKPSS ENSTTRP00000003853/1-784 FGESFYLLSS HINSYFKREE KMSEQKENKH FQDKSELELK KTEDDEKPSS 251 300 ENSP00000410804/1-782 PDPGILAYKP --GSESVHTV DKPTSPSAIP DVLQVSTKQS IANFLSRPTE ENSBTAP00000017658/1-784 PDPGILSDKK LDSEASLYSE DKPGSPSGTP EVLPISTKQS IANFLSRPTE BACU012629/1-401 ---------- ---------- ---------- ---------- ---------- bmy_07176T0/1-420 PDPGVLTDKK LGSEASLCSE DNAASPSGTP EVLPISTKQS IANFLSRPTE ENSTTRP00000003853/1-784 PDPGVLTDKK LGSEASLYSE DDAASPSGTP EVLPISTKQS IANFLSRPTE 301 350 ENSP00000410804/1-782 GVQALVGGYI GGLVPKLKYD SKSQSEEQEE PAKTDQAVSK DRNAEEKKRL ENSBTAP00000017658/1-784 GVQALVGGYI GGLVPKLKYD SKSQLEDQEE ATKAEQAVSK DKNAEEKRRL BACU012629/1-401 ---------- ---------- ---------- ---------- ---------- bmy_07176T0/1-420 GVQAL----- ---------- ---------- ---------- ---------- ENSTTRP00000003853/1-784 GVQALVGGYI GGLVPKLKYD SKSQLEEQEE AMKAEQAISK DKNAEEKRRL 351 400 ENSP00000410804/1-782 SLQREKIIAR VSIDNRTRAL VQALRRTTDP KLCITRVEEL TFHLLEFPEG ENSBTAP00000017658/1-784 SLQREKIIAR VSIDNRTRAL VQALRRTTDP RLCINRVEEL TFHLLEFPEG BACU012629/1-401 ---------- ---------- ---------- ---------- ---------G bmy_07176T0/1-420 ------IIAR VSIDNRTRAL VQALRRTTDP RLCINRVEEL TFHLLEFPEG ENSTTRP00000003853/1-784 SLQREKIIAR VSIDNRTRAL VQALRRTTDP RLCINRVEEL TFHLLEFPEG 401 450 ENSP00000410804/1-782 KGVAVKERII PYLLRLRQIK DETLQAAVRE ILALIGYVDP VKGRGIRILS ENSBTAP00000017658/1-784 KGVAVKEKII PYLLRLRQIK DETLQAAVRE ILALIGYVDP VKGRGIRILS BACU012629/1-401 LKAASTEKII PYLLRLRQIK DETLQAAVRE ILALIGYVDP VKGRGIRILT bmy_07176T0/1-420 KGVAVKTMVI IYQLF----- ---------- ---------P LTVNG-SLLP ENSTTRP00000003853/1-784 KGVAVKEKII PYLLRLRQVK DETLQAAVRE ILALIGYVDP VKGRGIRXXX 451 500 ENSP00000410804/1-782 IDGGGTRGVV ALQTLRKLVE LTQKPVHQLF DYICGVSTGA ILAFMLGLFH ENSBTAP00000017658/1-784 IDGGGTRGVV ALQTLRKLVE LTQKPVHQLF DYICGVSTGA ILAFMLGLFH BACU012629/1-401 IDGGGTRGVV ALQTLRKLVE LTQKPVHQLF DYICGVSTGA ILAFMLGLFH bmy_07176T0/1-420 KIMEGTLGVV ALQTLRKLVE LTQKPVHQLF DYICGVSTGY LL-------- ENSTTRP00000003853/1-784 XXXXXXXGVV ALQTLRKLVE LTQKPVHQLF DYICGVSTGA ILAFMLGLFH 501 550 ENSP00000410804/1-782 MPLDECEELY RKLGSDVFSQ NVIVGTVKMS WSHAFYDSQT WENILKDRMG ENSBTAP00000017658/1-784 MPLDECEELY RKLGSDVFSQ NVIVGTVKMS WSHAFYDSQT WENILKDRMG BACU012629/1-401 MPLDECEELY RKLGSDVFSQ NVIVGTVKMS WSHAFYDSET WENILKDRMG bmy_07176T0/1-420 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000003853/1-784 MPLDECEELY RKLGSDVFSQ NVIVGTVKMS WSHAFYDSQT WENILKDRMG 551 600 ENSP00000410804/1-782 SALMIETARN PTCPKVAAVS TIVNRGITPK AFVFRNYGHF PGINSHYLGG ENSBTAP00000017658/1-784 SSLMIETARN PKCPKVAAVS TIVNRGITPK AFVFRNYGHF PGINSHYLGG BACU012629/1-401 SSLMIETARN PMCPKVAAVS TIVNRGITPK AFVFRNYGHF PGVNSHYLGG bmy_07176T0/1-420 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000003853/1-784 SSLMIETARN PMCPKXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 601 650 ENSP00000410804/1-782 CQYKMWQAIR ASSAAPGYFA EYALGNDLHQ DGGLLLNNPS ALAMHECKCL ENSBTAP00000017658/1-784 CQYKMWQAIR ASSAAPGYFA EYALGNDLHQ DGGLLLNNPS ALAMHECKCL BACU012629/1-401 CQYKMWQAIR ASSAAPGYFA EYVLGNDLHQ DGGLLLNNPS ALAIHECKCL bmy_07176T0/1-420 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000003853/1-784 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX DGGLLLNNPS ALAIHECKCL 651 700 ENSP00000410804/1-782 WPDVPLECIV SLGTGRYESD VRNTVTYTSL KTKLSNVINS ATDTEEVHIM ENSBTAP00000017658/1-784 WPDVPLECIV SLGTGRYESD VRNNVTYTSL KTKLSNVINS ATDTEEVHVM BACU012629/1-401 WPDVPLECIV SLGTGRYESD VRNTATHTSL KTKLSNVINS ATDTEEVHVM bmy_07176T0/1-420 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000003853/1-784 WPDVPLECIV SLGTGRYESD VRNTATHTSL KTKLSNVINS ATDTEEVHVM 701 750 ENSP00000410804/1-782 LDGLLPPDTY FRFNPVMCEN IPLDESRNEK LDQLQLEGLK YIERNEQKMK ENSBTAP00000017658/1-784 LDGLLPPDTY FRFNPVMCEN IPLDESRNEK LNQLQLEGLK YIERNEEKMK BACU012629/1-401 LDGLLPPDTY FRFNPVICEN IPLDESRNEK LDQLQLEGLK YIERNEEKMK bmy_07176T0/1-420 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000003853/1-784 LDGLLPPDTY FRFNPVICEN IPLDESRNEK LDQLQLEGLK YIERNEEKMK 751 800 ENSP00000410804/1-782 KVAKILSQEK TTLQKINDWI KLKTDMYEGL PFFSKL ENSBTAP00000017658/1-784 KLAKILSQEK TTLQKINDWI KLKTDMYEGL PFFSKL BACU012629/1-401 KLAKILSQEK TTLQKINDWI KLKTDMYEGL PFFSKL bmy_07176T0/1-420 ---------- --------WN RLKR------ ------ ENSTTRP00000003853/1-784 KLAKILSQEK TTLQKINDWI KLKTDMYEGL PFFSKL