KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:02:23 2014 Check: 00 .. Name: ENSP00000387928/1-334 Len: 378 Check: 553 Weight: 1.00 Name: BACU009769/1-317 Len: 378 Check: 2905 Weight: 1.00 Name: ENSBTAP00000017659/1-337 Len: 378 Check: 2105 Weight: 1.00 Name: bmy_16646T0/1-262 Len: 378 Check: 1540 Weight: 1.00 Name: ENSTTRP00000016084/1-168 Len: 378 Check: 9465 Weight: 1.00 // 1 50 ENSP00000387928/1-334 MEPRTGGAAN PKGSRGSRGP SPLAGPSARQ LLARLDARPL AARAAVDVAA BACU009769/1-317 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000017659/1-337 MERRPGGGTD PRGSKGGGGG PQPEDASARQ FLARLKARPL AARAAADVAA bmy_16646T0/1-262 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000016084/1-168 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000387928/1-334 LVRRAGATLR LRRKEAVSVL DSADIEVTDS RLPHATIVDH RP-QHRWLET BACU009769/1-317 ---MCKALVE AAEYPAISVL DSADIEVTDS RLPNATFVEH RP-QHRRSET ENSBTAP00000017659/1-337 LVRRAGATLR LRPKEAISML YSAEIEVTDN RLPNANFVEQ RP-QHRRSET bmy_16646T0/1-262 ---------- --------ML DSADIEVTDS RLPNATFVEH RP-QHRRSET ENSTTRP00000016084/1-168 ----MPLSWN TGPRYHLVLL EATCLE---- ----AVYVYL CPLQHRRSET 101 150 ENSP00000387928/1-334 C---NAPPQL IQGKAHSAPK PSQASGHFSV ELVRGYAGFG LTLGGGRDVA BACU009769/1-317 LGTRTAPLQV TQGKARRASK PPQASGQFCV ELVRSSVGFG FTLSGGRDAG ENSBTAP00000017659/1-337 MGIRTAPPQV TQGKAHPPLK SPQASGQFSV ELIRSSAGFG FTLSGGRDAG bmy_16646T0/1-262 LGTRTAPLQV TQGKARRASK PPQASGQFCV ELVRSSVGFG FTLSGGRDAG ENSTTRP00000016084/1-168 LGTRTAPPQV TEGKARRASK PPQASGQFCV ELVRSSVGFG FTLSGGRDAD 151 200 ENSP00000387928/1-334 GDTPLAVRGL LKDGPAQRCG RLEVGDVVLH INGESTQGLT HAQAVERIRA BACU009769/1-317 GDAPLAVRGL LKDGPAQRCG RLQAGDLVLH INGESTQGLT HAEVMDRIRA ENSBTAP00000017659/1-337 GDAPLAVRRL LKDGPAQRCG RLQAGDLVLH INGESTQGLT HVEVVDRIRR bmy_16646T0/1-262 GDAPLAVRGL LKDGPAQRCG RLQAGDLVLH INGESTQGLT HAEVMDRIRA ENSTTRP00000016084/1-168 GDAPLAVRGL LKDGPAQRCG RLQPGDLVLH INGESTQGLT HAEVMDRIRT 201 250 ENSP00000387928/1-334 GGPQLHLVIR RPLETHPGKP RGVGEPRKGV VPSWPDRSPD PGGPEVTGSR BACU009769/1-317 GGPRLYLVLS RPPETHPGKP EGSTSPRSPR ------GVSG TALPDRPALR ENSBTAP00000017659/1-337 GGPRLCLVLS RPPETHPGKP EVVGRPQKED VLPSPDRIPD PGEPEMTKTR bmy_16646T0/1-262 GGPRLYLVLS RPPETHPGKP EGVGGPWRED -----DRSAD PGGPAVTRSR ENSTTRP00000016084/1-168 GGPRLCLVLS RPPETHPGKP ERVGGPWKED ---------- ---------- 251 300 ENSP00000387928/1-334 S-SSTSLVQH PPSRTTLKKT RGSPEPSPEA AADGPTVSPP ERRAEDPNDQ BACU009769/1-317 FLLRAGEILC LVILICF-GA STSGYSFLSV IEMIFAAIFF VVYMCDLHTK ENSBTAP00000017659/1-337 SASTSSPLQH PRPRTTP-QN RGSQEPRLEG AADGPAVLAA ERRTEDPNDQ bmy_16646T0/1-262 S-SSASPLQH PRPRTTP-QT RGSPESSP-G VADDPAVPPP EGSTENPNDH ENSTTRP00000016084/1-168 ---------- ---------- ---------- ---------- ---------- 301 350 ENSP00000387928/1-334 IPGSPGPW-- ---------- --------LV PSEERLSRAL GVRGAAQFAQ BACU009769/1-317 IQIINWPWSD FFRTLVAVIL YLITSIVVLV ERGNHSKIVA GVLGLIAACL ENSBTAP00000017659/1-337 TPDSPGPW-- ---------- --------LT PSEERLSRAL GVPGAEQLAL bmy_16646T0/1-262 TPDSPGPW-- ---------- --------LV PSEERLSRAL GVPGAAQLAL ENSTTRP00000016084/1-168 ---------- ---------- ---------- ---------- ---------- 351 400 ENSP00000387928/1-334 -------EMA AGRRRH---- -------- BACU009769/1-317 FGYDAYITFP LRQQRHTAAP TDPADGPV ENSBTAP00000017659/1-337 -------EMA TGRRRH---- -------- bmy_16646T0/1-262 -------EMA AGRRRH---- -------- ENSTTRP00000016084/1-168 ---------- ---------- --------