KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:02:25 2014 Check: 00 .. Name: ENSP00000472286/1-1082 Len: 1113 Check: 8096 Weight: 1.00 Name: ENSBTAP00000017672/1-1096 Len: 1113 Check: 1126 Weight: 1.00 Name: ENSTTRP00000005804/1-1088 Len: 1113 Check: 7801 Weight: 1.00 Name: bmy_02647T0/1-1055 Len: 1113 Check: 4629 Weight: 1.00 Name: BACU016639/1-1096 Len: 1113 Check: 6547 Weight: 1.00 // 1 50 ENSP00000472286/1-1082 MAARRITQET FDAVLQEKAK RYHMDASGEA VSETLQFKAQ DLLRAVPRSR ENSBTAP00000017672/1-1096 MAARRIAQET FDAVLQEKAN RY-MDPSGEA VGETLQFKAQ DLLRTVPRAR ENSTTRP00000005804/1-1088 MAARRIAQET FDAVLQEKAN RYHMDPSGEA VGEALQFKAQ DLLRTVPRAR bmy_02647T0/1-1055 ---------- ---------- ---------- ---------- ---------- BACU016639/1-1096 MAARRIAQET FDAVLQEKAN RYHMDPSGEA VGEALQFKAQ DLLRTVPRAR 51 100 ENSP00000472286/1-1082 AEMYDDVHSD GRYSLSGSVA HSRDAGREGL RSDVFPGPSF RSSNPSISDD ENSBTAP00000017672/1-1096 ADMFDDIHSD SRYTLGTSVT HPRDTGREGL RGDIFPGPSF RSNNPSVSED ENSTTRP00000005804/1-1088 ADMYDDIHSN SRYTLGGSVA HPQDTGREGL RGDIFPGPSF RSSNPSVSDD bmy_02647T0/1-1055 --MYDDIHSN SRYTLGGSVA HPRDTGREGL RGDIFPGPSF RSSNPSVSDD BACU016639/1-1096 ADMYDDIHSN SRYTLGGSVA HPRDTGREGL RGDIFPGPSF RSSNPSVSDD 101 150 ENSP00000472286/1-1082 SYFRKECGRD LEFSHSDSRD QVIGHRKLGH FRSQDWKFAL RGSWEQDFGH ENSBTAP00000017672/1-1096 SYFRKECGRD LEFSHPNSRD QVFGHRKLGH FRSQDWKFAL HGSWEQDFAH ENSTTRP00000005804/1-1088 SYFRKECGRD LEFSHPDSRD QVFGHRKLGH FRSQDWKFAL RGSWEQDFGH bmy_02647T0/1-1055 SYFRKECGRD LEFSHPDSRD QVFGHRKLGH FRSQDWKFAL RGSWEQDFGH BACU016639/1-1096 SYFHKECGRD LEFSHPDSRD QVFGHRKLGH FRSQDWKFAL RGSWEQDFGH 151 200 ENSP00000472286/1-1082 PVSQESSWSQ EYSFGPSAVL GDFGSSRLIE KECLEKESRD YDVDHPGEAD ENSBTAP00000017672/1-1096 SVSQESSWSQ EYSFGPSALL GNFGSSRLIE KECLEKESHD YDGDRPGEAD ENSTTRP00000005804/1-1088 SVSQESSWSQ EYSFGPSALL GDFGSSRLIE KECLEKESRD YDVDRPGEAD bmy_02647T0/1-1055 SVSQESSWSQ EYSFGPSALL GDFGSSRLIE KECLEKESRD YDVDRPGEAD BACU016639/1-1096 SVSQESSWSQ EYSFGPSALL GDFGSSRLIE KECLEKESRD YDVDRPGEAD 201 250 ENSP00000472286/1-1082 SVLRGGSQVQ ARGRALNIVD QEGSLLGKGE TQGLLTAKGG VGKLVTLRNV ENSBTAP00000017672/1-1096 SVLRGSSQAQ GRGRGLNLAD QEGAVLGKGE TQGLLTSKVG VGKLVMLRNV ENSTTRP00000005804/1-1088 TVLRGSSQVQ GRGRGLNIVD QEGALLGKGE TQGLLTPKGG VGKLVMLRNM bmy_02647T0/1-1055 TVLRGSSQVQ GRGRGLNIVD QEGALLGKGE TQGLLTPKGG VGKLVMLRNV BACU016639/1-1096 TVLRGSSQVQ GRGRGLNIVD QEGALLGKGE TQGLLTPKGG VGKLVMLRNV 251 300 ENSP00000472286/1-1082 STKKIPTVNR ITPKTQGTNQ IQKNTPSPDV TLGTNPGTED IQFPIQKIPL ENSBTAP00000017672/1-1096 STKKVPTMSR ITPKTQGTNQ IQKTTSSPDV TLATNPGTE- VQFPTRKVPL ENSTTRP00000005804/1-1088 STKQVPTVSC ITPKTQGTDQ IQKTTPSPDL TLGTNPGTED VQFPTQKIPL bmy_02647T0/1-1055 STKKVPTISC ITPKTQGTNQ IQKTTPSPDL TLGTNPGTED VQFPTQKIPL BACU016639/1-1096 STKKVPTISC ITPKTQGTNQ IQKTTPSPDL TLGTNPGTED VQFPTQKIPL 301 350 ENSP00000472286/1-1082 GLDLKNLRLP RRKMSFDIID KSDVFSRFGI EIIKWAGFHT IKDDIKFSQL ENSBTAP00000017672/1-1096 GLDLKDVRLP RRKMSFDIID KSDVFSRFGI EIIKWAGFHT IKDDVKFSQL ENSTTRP00000005804/1-1088 GLNLKDIRLP RRKMSFDLID KSDVFSRFGI EIIKWAGFHT IKDDVKFSQL bmy_02647T0/1-1055 GLNLKDIRLP RRKMSFDLID KSDVFSRFGI EIIKWAGFHT IKDDVKFSQL BACU016639/1-1096 GLNLKDIRLP RRKMSFDLID KSDVFSRFGI EIIKWAGFHA IKDDVKFSQL 351 400 ENSP00000472286/1-1082 FQTLFELETE TCAKMLASFK CSLKPEHRDF CFFTIKFLKH SALKTPRVDN ENSBTAP00000017672/1-1096 FQTLFELETE TCAKMLASFK CSLKPEHRDF CFFTIKFLKH SALKTPRVDN ENSTTRP00000005804/1-1088 FQTLFELETE TCAKMLASFK CSLKPEHRDF CFFTIKFLKH SALKTPRVDN bmy_02647T0/1-1055 FQTLFELETE TCAKMLASFK CSLKPEHRDF CFFTIKFLKH SALKTPRVDN BACU016639/1-1096 FQTLFELETE TCAKMLASFK CSLKPEHRDF CFFTIKFLKH SALKTPRVDN 401 450 ENSP00000472286/1-1082 EFLNMLLDKG AVKTKNCFFE IIKPFDKYIM RLQDRLLKSV TPLLMACNAY ENSBTAP00000017672/1-1096 EFLNMLLDKG AVKTKNCFFE IIKPFDKYIM RLQDRLLKSV TPLLMACNAY ENSTTRP00000005804/1-1088 EFLNMLLDKG AVKTKNCFFE IIKPFDKYIM RLQDRLLKSV TPLLMACNAY bmy_02647T0/1-1055 EFLNMLLDKG AVKTKNCFFE IIKPFDKYIM RLQDRLLKSV TPLLMACNAY BACU016639/1-1096 EFLNMLLDKG AVKTKNCFFE IIKPFDKYIM RLQDRLLKSV TPLLMACNAY 451 500 ENSP00000472286/1-1082 ELSVKMKTLS NPLDLALALE TTNSLCRKSL ALLGQTFSLA SSFRQEKILE ENSBTAP00000017672/1-1096 ELSVKMKTLT NPLDLAIALE TTNSLCRKSL ALLGQTFSLA SSFRQEKILE ENSTTRP00000005804/1-1088 ELSVKMKTLS NPLDLAIALE TTNSLCRKSL ALLGQTFSLA SSFRQEKILE bmy_02647T0/1-1055 ELSVKMKTLS NPLDLAIALE TTNSLCRKSL ALLGQTFSLA SSFRQEKILE BACU016639/1-1096 ELSVKMKTLS NPLDLAIALE TTNSLCRKSL ALLGQTFSLA SSFRQEKILE 501 550 ENSP00000472286/1-1082 AVGLQDIAPS PAAFPNFEDS TLFGREYIDH LKAWLVSSGC PLQVKKAEPE ENSBTAP00000017672/1-1096 AVGLQDIAPS PAAFPNFEDS TLFGREYIDH LKAWLVSSGC PLQVKKTESE ENSTTRP00000005804/1-1088 AVGLQDIAPS PAAFPNFEDS TLFGREYIDH LKAWLVSSGC PLQVKKAEPE bmy_02647T0/1-1055 AVGLQDIAPS PAAFPNFEDS TLFGREYIDH LKAWLVSSGC PLQVKKAEPE BACU016639/1-1096 AVGLQDIAPS PAAFPNFEDS TLFGREYIDH LKAWLVSSGC PLQVKKAEPE 551 600 ENSP00000472286/1-1082 PMREEEKMIP PTKPEIQAKA PSSLSDAVPQ RADHRVVGTI DQLVKRVIEG ENSBTAP00000017672/1-1096 PTRDEEKAVP STKPEIQAQA LSGLSDEVPQ RADHKVVDII DQLVARVIGG ENSTTRP00000005804/1-1088 PTRDQEKTVP PTKPEIQAKA LSGLSDEVPQ RADHKVVDTI DQLVTRVVGG bmy_02647T0/1-1055 PTRDQEKTVP PTKPEIQAKA LSGLSDEVPQ RADHKVVDTI DQLVTRVVGG BACU016639/1-1096 PTRDQEKTVP PTKPEIQAKA LSGLSDEVPQ RADHKVVDTI DQLVTRVVGG 601 650 ENSP00000472286/1-1082 SLSPKERTLL KEDPAY---W FLSDENSLEY KYYKLKLAEM QRMSENLRGA ENSBTAP00000017672/1-1096 SLSPKERALL QEDPAY---W FLSDDSSLEY KYYKLKLAEM QRMSQTLPGA ENSTTRP00000005804/1-1088 SLSPKERALL KEDPAY---W FLSDDSSLEY KYYKLKLAEM QRMSQNLPGA bmy_02647T0/1-1055 SLSPKERALL KEDPAYCLLR FLSDDSSLEY KYYKLKLAEM QRMSQTLPGA BACU016639/1-1096 SLSPKERALL KEDPAY---W FLSDDSSLEY KYYKLKLAEM QRISQTLPGA 651 700 ENSP00000472286/1-1082 DQKPTSADCA VRAMLYSRAV RNLKKKLLPW QRRGLLRAQG LRGWKARRAT ENSBTAP00000017672/1-1096 DQKPTAAECA VRAMLYARAV RSLKRRLLPG RRRGHLRAQG LRGWKVRRAT ENSTTRP00000005804/1-1088 DQKPMAAECA VRAMLYSRAV RSLKKRLLPG RRRGMLRAQG PRGCKVRRAT bmy_02647T0/1-1055 DQKPMAAECA VRAMLYARAV RSLKKRLLPG RRRGLLRAQG LRGWKVRRAT BACU016639/1-1096 DQKPMAAECA VRAMLYARAV RSLKKRLLPG RRRGLLRAQG LRGWKVRRAT 701 750 ENSP00000472286/1-1082 TGTQTLLSSG TRLKHHGRQA PGLSQAKPSL PDRNDAAKDC PPDPVGPSPQ ENSBTAP00000017672/1-1096 TGTQTLLSSG TRLKHHGRQA PGSLQGKSPQ PDRSDAAKDC PPELAGPSPR ENSTTRP00000005804/1-1088 TGTQTLLSSG TRLKHHGRQA PGSLQGKPPQ PDGNDVAKDC PPDPAGPSPR bmy_02647T0/1-1055 TGTQTLLSSG TRLKHHGRQA PGSLQGKPPQ PDGNDAAKDC PPDPAGPSPR BACU016639/1-1096 TGTQTLLSSG TRLKHHGRQA PGSLQGKPPQ PDRNDAAKDC PPDPAGPSPR 751 800 ENSP00000472286/1-1082 DPSLEASGPS PKPAGVDISE APQTSSPCPS ADIDMKTMET AEKLARFVAQ ENSBTAP00000017672/1-1096 DPSPEASGPS PKPGGLDVSE APQTSSPCPS IDVDTKTMET AEKLAKFVAQ ENSTTRP00000005804/1-1088 DPSPEASGPS SKPAGVDVSE APQTSSPCLS TDVDTKTMET AEKLAKFVAQ bmy_02647T0/1-1055 DPSPEASGPS PKPAXVDVSE APQTSSPCLS TDVDTKTMET AEKLAKFVAQ BACU016639/1-1096 DPSPEASGPS PKPAGVDVSE APQTSSPCLS TDVDTKTMET AEKLAKFVAQ 801 850 ENSP00000472286/1-1082 VGPEIEQFSI ENSTDNPDLW FLHDQNSSAF KFYRKKVFEL CPSICFTSSP ENSBTAP00000017672/1-1096 VGPEIEQFSI ENSIDNPDLW FLHDQNSSAF KFYRKKVFEL CPSICFTSSP ENSTTRP00000005804/1-1088 VGPEIEQFSI ENSIDNPDLW FLHDQNSSAF KFYRKKVFEL CPSICFTSSP bmy_02647T0/1-1055 VGPEIEQFSI ENSIDNPDLW FLHDQNSSAF KFYRKKVFEL CPSICFTSSP BACU016639/1-1096 VGPEIEQFSI ENSIDNPDLW FLHDQNSSAF KFYRKKVFEL CPSICFTSSP 851 900 ENSP00000472286/1-1082 HNLHTGGGDT TGSQESPVDL MEGEAEFEDE PPPREAELES PEVMPEEEDE ENSBTAP00000017672/1-1096 LTLHA--SES ADSQESPLEP MEGEGEFEDE PSQHEAELES PEVMPEEEEE ENSTTRP00000005804/1-1088 LNLPA--SKS TDSQESPLEP MEGEGEFEDE PSQHKAELES PEVMPEEDED bmy_02647T0/1-1055 LNLHA--SKS ADSQESPLEP MEGEGEFEDE PSQHEAELES PEVMPEEDEG BACU016639/1-1096 LNLHA--SKS ADSQESPLEP MEGEGEFEDE PSQHEAELES PEVMPEEDEG 901 950 ENSP00000472286/1-1082 D--------- DEDGGEEAPA PGGAGK---- ------SEGS TPADGLPGEA ENSBTAP00000017672/1-1096 EEEDEEDEEE DEEGGEEASP PGGVSRPAEG S-KSEGSEGS PPADGLLSEV ENSTTRP00000005804/1-1088 E---EEDE-E DEEGSEEAPT PGGATK---- ---SEGSEGS PPADGLLSGV bmy_02647T0/1-1055 E---EEDE-E DEERGEEAPT PGGASRPAGG STKSEGSEGS PPADGLLSEV BACU016639/1-1096 E---EEDEAE DEERGEEAPT PGGASRLAGG STKSEGSDGS PPADGLLSEV 951 1000 ENSP00000472286/1-1082 AEDDLAGAPA LSQASSGTCF PRKRISSKSL KVGMIPAPKR VCLIQEPKVH ENSBTAP00000017672/1-1096 AEDSPAGGPA LSQASSGACF PRKRISSKSL KVGMIPAPKR LCLIQEPKVH ENSTTRP00000005804/1-1088 TEDGPAGAPA LSQSSSGACF PRKRVSSKSL KVGMIPAPKR LCLIQEPKVH bmy_02647T0/1-1055 AEDGPAGAPA LSQSSSGACF PRKRVSSKSL KVGMIPAPKR LCLIQEPKVH BACU016639/1-1096 AEDGPAGAPA LSQSSSGACF PRKRVSSKSL KVGMIPAPKR LCLIQEPKVH 1001 1050 ENSP00000472286/1-1082 EPVRIAYDRP RGRPMSKKKK PKDLDFAQQK LTDKNLGFQM LQKMGWKEGH ENSBTAP00000017672/1-1096 EPVRIAYDRP RGRPVSKKKK PKDFDFAQQK LTDKNLGFQM LQKMGWKEGH ENSTTRP00000005804/1-1088 EPVRIAYDRP RGRPVTKKKK PQDFDFAQQK LTDKNLGFQM LQKMGWKEGH bmy_02647T0/1-1055 EPVRIAYDRP RGRPVTKKKK PQDFDFAQQK LTDKNLGFQM LQKMGWKEGH BACU016639/1-1096 EPVRIAYDRP RGRPVTKKKK PQDFDFAQQK LTDKNLGFQM LQKMGWKEGH 1051 1100 ENSP00000472286/1-1082 GLGSLGKGIR EPVSV----- ----GTPSEG EGLGADGQEH KEDTFDVFRQ ENSBTAP00000017672/1-1096 GLGSCGKGIR EPVSV----- ----GSASEG EGLGADGQEH KEDTFDVFRQ ENSTTRP00000005804/1-1088 GLGSCGKGIR EPVSV----- ----GTASEG EGLGADGQEH KEDTFDVFRQ bmy_02647T0/1-1055 GLGSCGKGIR EPVSVYAAGA GGQGGTASEG EGLGADGQEH KEDTFDVFRQ BACU016639/1-1096 GLGSCGKGIR EPVSV----- ----GTASEG EGLGADGQEH KEDTFDVFRQ 1101 1150 ENSP00000472286/1-1082 RMMQMYRHKR ANK ENSBTAP00000017672/1-1096 RMMQMYRHRR ASK ENSTTRP00000005804/1-1088 RMMQMYRHKR ANK bmy_02647T0/1-1055 RMMQMYRHKR ANK BACU016639/1-1096 RMMQMYRHKR ANK