KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:02:27 2014 Check: 00 .. Name: ENSTTRP00000000351/1-991 Len: 1111 Check: 2366 Weight: 1.00 Name: ENSBTAP00000017673/1-1023 Len: 1111 Check: 1525 Weight: 1.00 Name: ENSP00000350676/1-1060 Len: 1111 Check: 9669 Weight: 1.00 Name: bmy_21220T0/1-597 Len: 1111 Check: 7787 Weight: 1.00 Name: BACU012495/1-1056 Len: 1111 Check: 8617 Weight: 1.00 // 1 50 ENSTTRP00000000351/1-991 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000017673/1-1023 ---------- ---------- ---------- -------VLM KLYCL----Y ENSP00000350676/1-1060 MNRSRAIVQR GRVLPPPAPL DTTNLAGRRT LQGRAKMASV PVYCLCRLPY bmy_21220T0/1-597 ---------- ---------- ---------- ---------- ---------- BACU012495/1-1056 ---------- ---------- ---------- ------MASV PVYCLCRLPY 51 100 ENSTTRP00000000351/1-991 ---------- ---------- -CVGVEEEKA ADIDLYHCPN CEVLHGPSI- ENSBTAP00000017673/1-1023 IFSSVIIILD RCTLADFLFS SCVGVEEEKA ADIDLYHCPN CEVLHGPSIS ENSP00000350676/1-1060 DVTRFMIECD MCQ--DWFHG SCVGVEEEKA ADIDLYHCPN CEVLHGPSI- bmy_21220T0/1-597 ---------- ---------- ---------- ---------- ---------- BACU012495/1-1056 DVTRFMIECD MCQ--DWFHG SCVGVEEEKA ADIDLYHCPN CEVLHGPSI- 101 150 ENSTTRP00000000351/1-991 -MKKRRVSSK GHDTHKGKPV KTGSPTFIRE LRSRTFDSSD EVILKPTGSQ ENSBTAP00000017673/1-1023 LVKKRRVSSK GHDTHKGKPV KTGSPTFIRE LRSRTFDSSD EVILKPTGSQ ENSP00000350676/1-1060 -MKKRRGSSK GHDTHKGKPV KTGSPTFVRE LRSRTFDSSD EVILKPTGNQ bmy_21220T0/1-597 ---------- ---------- ---------- ---------- ---------- BACU012495/1-1056 -MKKRRVSSK GHDTHKGKPV KTGSPTFIRE LRSRTFDSSD EVILKPTGSQ 151 200 ENSTTRP00000000351/1-991 LTVEFLEENS FSVPILVLKK DGLGMTLPSP SFTVRDVEHY VGSDKEIDVI ENSBTAP00000017673/1-1023 LTVEFLEENS FSVPILVLKK DGLGMTLPSP SFTVRDVEHY VGSDKEIDVI ENSP00000350676/1-1060 LTVEFLEENS FSVPILVLKK DGLGMTLPSP SFTVRDVEHY VGSDKEIDVI bmy_21220T0/1-597 ---------- ---------- ---------- ---------- ---------- BACU012495/1-1056 LTVEFLEENS FSVPILVLKK DGLGMTLPSP SFTVRDVEHY VGSDKEIDVI 201 250 ENSTTRP00000000351/1-991 DVTRQADCKM KLGDFVKYYY SGKREKVLNV ISLEFSDTRL SNFVETPKIV ENSBTAP00000017673/1-1023 DVARQADCKM KLGDFVKYYY SGKREKVLNV ISLEFSDTRL SNLVETPKIV ENSP00000350676/1-1060 DVTRQADCKM KLGDFVKYYY SGKREKVLNV ISLEFSDTRL SNLVETPKIV bmy_21220T0/1-597 ---------- ---------- ---------- ---------- ---------- BACU012495/1-1056 DVTRQADCKM KLGDFVKYYY SGKREKVLNV ISLEFSDTRL SNLVETPKIV 251 300 ENSTTRP00000000351/1-991 RKLSWVENLW PEECIFERPN VQKYCLMSVR DSYTDFHIDF GGTSVWYHVL ENSBTAP00000017673/1-1023 RKLSWVENLW PEECIFERPN VQKYCLMSVR DSYTDFHIDF GGTSVWYHVL ENSP00000350676/1-1060 RKLSWVENLW PEECVFERPN VQKYCLMSVR DSYTDFHIDF GGTSVWYHVL bmy_21220T0/1-597 ---------- ---------- ---------- ---------- ---------- BACU012495/1-1056 RKLSWVENLW PEECIFERPN VQKYCLMSVR DSYTDFHIDF GGISVWYHVL 301 350 ENSTTRP00000000351/1-991 KGEKIFYLIR PTNANLTLFE CWSSSSNQNE MFFGDQVDKC YKCSVKQGQT ENSBTAP00000017673/1-1023 KGEKIFYLIR PTNANLTLFE CWSSSSNQNE MFFGDQVDKC YKCSVKQGQT ENSP00000350676/1-1060 KGEKIFYLIR PTNANLTLFE CWSSSSNQNE MFFGDQVDKC YKCSVKQGQT bmy_21220T0/1-597 ---------- ---------- ---------- ---------- ---------- BACU012495/1-1056 KGEKIFYLIR PTNANLTLFE CWSSSSNQNE MFFGDQVDKC YKCSVKQGQT 351 400 ENSTTRP00000000351/1-991 LFIPTGWIHA VLTPVDCLAF GGNFLHSLNI EMQLKAYEIE KRLSTADLFK ENSBTAP00000017673/1-1023 LFIPTGWIHA VLTPVDCLAF GGNFLHSLNI EMQLKAYEIE KRLSTADLFK ENSP00000350676/1-1060 LFIPTGWIHA VLTPVDCLAF GGNFLHSLNI EMQLKAYEIE KRLSTADLFR bmy_21220T0/1-597 ---------- ---------- ---------- -MQLKAYEIE KRLSTADLFK BACU012495/1-1056 LFIPTGWIHA VLTPVDCLAF GGNFLHSLNI EMQLKAYEIE KRLSTADLFK 401 450 ENSTTRP00000000351/1-991 FPNFETICWY VGKHILDIFR GLRENRRHPA SYLVHGGKAL NLAFRAWTRK ENSBTAP00000017673/1-1023 FPNFETICWY VGKHILDIFR GLRENRRHPA SYLVHGGKAL NLAFRAWTKK ENSP00000350676/1-1060 FPNFETICWY VGKHILDIFR GLRENRRHPA SYLVHGGKAL NLAFRAWTRK bmy_21220T0/1-597 FPNFETICWY VGKHILDIFR GLRENRRHPA SYLVHGGKAL NLAFRAWTRK BACU012495/1-1056 FPNFETICWY VGKHILDIFR GLRENRRHPA SYLVHGGKAL NLAFRAWTRK 451 500 ENSTTRP00000000351/1-991 ---------- ---------- ---------- --EALPDHED EIPETVRTVQ ENSBTAP00000017673/1-1023 ---------- ---------- ---------- --EALPDHED EIPETVRTVQ ENSP00000350676/1-1060 ---------- ---------- ---------- --EALPDHED EIPETVRTVQ bmy_21220T0/1-597 ---------- ---------- ---------- --EALPDHED EIPETVRTVQ BACU012495/1-1056 EVNILISLPT LEVYSQQGLA LGRSSGDVEE TREALPDHED EIPETVRTVQ 501 550 ENSTTRP00000000351/1-991 LIKDLAREIR LVEDIFQQNV GKTSNIFGLQ RIFPAGSIPL TRPAHSTSVS ENSBTAP00000017673/1-1023 LIKDLAREIR LVEDIFQQNV GKTSNIFGLQ RIFPAGSIPL TRPAHSTSVS ENSP00000350676/1-1060 LIKDLAREIR LVEDIFQQNV GKTSNIFGLQ RIFPAGSIPL TRPAHSTSVS bmy_21220T0/1-597 LIKDLAREIR LVE------- ---------- ---------- ---------- BACU012495/1-1056 LIKDLAREIR LVEDIFQQNV GKTSNISGLQ RIFPAGSIPL TRPAHSTSVS 551 600 ENSTTRP00000000351/1-991 MSRLSLPSKS GSKKKGLKPK EFFKKAERKG KESSALGPAG QLSYNLMDTY ENSBTAP00000017673/1-1023 MSRLSLPSKS GSKKKGLKPK EFFKKAERKG KESSALGPAG QLSYNLMDTY ENSP00000350676/1-1060 MSRLSLPSKN GSKKKGLKPK ELFKKAERKG KESSALGPAG QLSYNLMDTY bmy_21220T0/1-597 ---------- ---------- ---------- ---------- ---------- BACU012495/1-1056 MSRLSLPSKS GSKKKGLKPK EFFKKAERKG KESSALGPAG QLSYNLMDTY 601 650 ENSTTRP00000000351/1-991 SHQALKTGCS QKAKFNITGT CLNDSDDDSP DLDLDGNEGP LALLMSNGST ENSBTAP00000017673/1-1023 NHQALKTGSS QKAKFNITGT CLNDSDDDSP DLDLDGNEGP LALLMSNGST ENSP00000350676/1-1060 SHQALKTGSF QKAKFNITGA CLNDSDDDSP DLDLDGNESP LALLMSNGST bmy_21220T0/1-597 ---------- ----FNITGT CLNESDDDSP DLDLDGNEGP LALLMSNGST BACU012495/1-1056 SHQALKTGCS QKAKFNITGT CLNDSDDDSP DLDLDGNEGP LSLLMSNGST 651 700 ENSTTRP00000000351/1-991 KRVKSLSKSR RARITKKVDK ARLVAEHVME DEFDLDSDDE LQIDERLGKE ENSBTAP00000017673/1-1023 KKVKSLSKSR RAKIVKKADK TRVVSEQVME DELDLDSDDE LQIDERLGKE ENSP00000350676/1-1060 KRVKSLSKSR RTKIAKKVDK ARLMAEQVME DEFDLDSDDE LQIDERLGKE bmy_21220T0/1-597 KRVKSLSKSR RAKIAKKVDK ARLVAEQVME DEFDLDSDDE LQIDERLGKE BACU012495/1-1056 KRVKSLSKSR RAKIAKKVDK ARLVAEQVME DEFDLDSDDE LQIDERLGKE 701 750 ENSTTRP00000000351/1-991 KATLIIRPK- ---------- ----FPRKLP RAKPCSDPNR VREPGEVEFD ENSBTAP00000017673/1-1023 KATLLIRPK- ---------- ----FPRKLP RAKPCSDPNR VREPGEVEFD ENSP00000350676/1-1060 KATLIIRPK- ---------- ----FPRKLP RAKPCSDPNR VREPGEVEFD bmy_21220T0/1-597 KATLIIRPNA NLSFMISAFH CFLEFPRKLP RAKPCSDPNR VREPGEVEFD BACU012495/1-1056 KATLIIRPK- ---------- ----FPRKLP RAKPCSDPNR VREPGEVEFD 751 800 ENSTTRP00000000351/1-991 IEXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXEAP ENSBTAP00000017673/1-1023 IEEDYTTDED LIEGVEGKLG NGSGAGGILD LLKASRQVGG PDYAALTEAP ENSP00000350676/1-1060 IEEDYTTDED MVEGVEGKLG NGSGAGGILD LLKASRQVGG PDYAALTEAP bmy_21220T0/1-597 IEEDYTTDED VVEGVEGKLG NGSGAGGILD LLKASRQVGG PDYAALTEAP BACU012495/1-1056 IEEDYTTDED VVEGVESKLG NGSGAGGILD LLKASRQVGG PDYAALTEAP 801 850 ENSTTRP00000000351/1-991 ASPSTQEAIQ GMLCMANLQS SSSSPATSSL QAWWTGGQDR SSGSSSSGLG ENSBTAP00000017673/1-1023 ASPSTQEAIQ GMLCMANLQS SSSSPATSSL QAWWTGGQDR SSTSSNSGLG ENSP00000350676/1-1060 ASPSTQEAIQ GMLCMANLQS SSSSPATSSL QAWWTGGQDR SSGSSSSGLG bmy_21220T0/1-597 ASPSTQEAIQ GMLCMANLQS SSSSPATSSL QAWWTGGQDR SSGSSSSGLG BACU012495/1-1056 ASPSTQEAIQ GMLCMANLQS SSSSPATSSL QAWWTGGQDR SSGSSSSGLG 851 900 ENSTTRP00000000351/1-991 TVSSSPASQR TPGKRPIKRP AYWRTESEEE EENASLDEQD SLGACFKDAE ENSBTAP00000017673/1-1023 TMSSSPASQR TPGKRPIKRP AYWKTESEEE EENASLDEQD SLGACFKDAE ENSP00000350676/1-1060 TVSNSPASQR TPGKRPIKRP AYWRTESEEE EENASLDEQD SLGACFKDAE bmy_21220T0/1-597 TVSSSPASQR TPGKRPIKRP AYWRTESEEE EENASLDEQD SLGACFKDAE BACU012495/1-1056 TVSSSPASQR TPGKRPIKRP AYWRTESEEE EENASLDEQD SLGACFKDAE 901 950 ENSTTRP00000000351/1-991 YIYPSLESDD DDPALKSRPK KKKNSDDAPW SPKARVTPTL PKQDRPVREG ENSBTAP00000017673/1-1023 YIYPSLESDD DDPALKSRHK KKKNSDDAPW SPKARVTPTL PKQDRPVREG ENSP00000350676/1-1060 YIYPSLESDD DDPALKSRPK KKKNSDDAPW SPKARVTPTL PKQDRPVREG bmy_21220T0/1-597 YIYPSLESDD DDPALKSRPK KKKNSDDAPW SPKARVTPTL PKQDRPVREG BACU012495/1-1056 YIYPSLESDD DDPALKSRPK KKKNSDDAPW SPKARVTPTL PKQDRPVREG 951 1000 ENSTTRP00000000351/1-991 TRVASIETGL AAAAAKLAQQ ELQKAQKKKY IKKKTLLKEV EQPRPQEPNL ENSBTAP00000017673/1-1023 TRVASIETGL AAAAAKLAQQ ELQKAQKKKY IKKKPLLKEV EQPRPQEPNL ENSP00000350676/1-1060 TRVASIETGL AAAAAKLAQQ ELQKAQKKKY IKKKPLLKEV EQPRPQDSNL bmy_21220T0/1-597 TRVASIETGL AAAAAKLAQQ ELQKAQKKKY IKKKPLLKEV EQPRPQEPNL BACU012495/1-1056 TRVASIETGL AAAAAKLAQQ ELQKAQKKKY IKKKPLLKEV EQPRPQEPNL 1001 1050 ENSTTRP00000000351/1-991 SVAVPGPTLA TTPQLLTSSS PLPPPEPKQE ALSGSLADHE YTARPNAFGM ENSBTAP00000017673/1-1023 SMAVPAPTLA ATPQLLTSSS PLPPPEPKQE ALSGSLADHE YTARPNAFGM ENSP00000350676/1-1060 SLTVPAPTVA ATPQLVTSSS PLPPPEPKQE ALSGSLADHE YTARPNAFGM bmy_21220T0/1-597 SVAVPAPTLA TTPQLLTSSS PLPPPEPKQE ALSGSLADHE YTARPNAFGM BACU012495/1-1056 SVAVPAPTLA TTPQLLTSSS PLPPPEPKQE ALSGSLADHE YTARPNAFGM 1051 1100 ENSTTRP00000000351/1-991 AQANRSTTPM APGVFLTQRR PSVGSQSNQT GPGKRPKKGL ATAKQRLGRI ENSBTAP00000017673/1-1023 AQANRSTTPM APGVFLTQRR PSVGSQSNQA GQGKRPKKGL ATAKQRLGRI ENSP00000350676/1-1060 AQANRSTTPM APGVFLTQRR PSVGSQSNQA GQGKRPKKGL ATAKQRLGRI bmy_21220T0/1-597 AQANRSTTPM APGVFLTQRR PSVGSQSNQA GPGKRPKKGL ATAKQRLGRI BACU012495/1-1056 AQANRSTTPM APGVFLTQRR PSVGSQSNQA GPGKRPKKGL ATAKQRLGRI 1101 1150 ENSTTRP00000000351/1-991 LKIHRNGKLL L ENSBTAP00000017673/1-1023 LKIHRNGKLL L ENSP00000350676/1-1060 LKIHRNGKLL L bmy_21220T0/1-597 LKIHRNGKLL L BACU012495/1-1056 LKIHRNGKLL L