KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:02:30 2014 Check: 00 .. Name: ENSP00000338964/1-662 Len: 666 Check: 9373 Weight: 1.00 Name: BACU015543/1-655 Len: 666 Check: 7426 Weight: 1.00 Name: ENSBTAP00000017688/1-662 Len: 666 Check: 9462 Weight: 1.00 Name: ENSTTRP00000013452/1-652 Len: 666 Check: 7558 Weight: 1.00 Name: bmy_00573T0/1-654 Len: 666 Check: 7273 Weight: 1.00 // 1 50 ENSP00000338964/1-662 MAAENEASQE SALGAYSPVD YMSITSFPRL PEDEPAPAAP LRGRKDEDAF BACU015543/1-655 MAAENEASQE SALGAYSPVD YMSITSFPRL PEDEPAPAVP LRSRKDEDAF ENSBTAP00000017688/1-662 MAAENEASQE SALGAYSPVD YMSITSFPRL PEDEPAPAVP LRGRKDEDAF ENSTTRP00000013452/1-652 MAAENEASQE SALGAYSPVD YMSITSFPRL PEDEPAPAAP LRSRKDEDAF bmy_00573T0/1-654 MAAENEASQE SALGAYSPVD YMSITSFPRL PEDEPAPAVP LRSRKDEDAF 51 100 ENSP00000338964/1-662 LGDPDTDPDS FLKSARLQRL PSSSSEMGSQ DGSPLRETRK DPFSAAAAEC BACU015543/1-655 LGDPDTDPDS FLKSARLQRL PSSSSEMGSQ DGSPLRETRK DPFSAAASEC ENSBTAP00000017688/1-662 LGDPDTDPDS FLKSARLQRL PSSSSEMGSQ DGSPLRETRK DPFSAAASEC ENSTTRP00000013452/1-652 LGDPDTDPDS FLKSARLQRL PSSSSEMGSQ DGSPLRETRK DPFSAAASEC bmy_00573T0/1-654 LGDPDTDPDS FLKSARLQRL PSSSSEMGSQ DGSPLRETRK DPFSAAASEC 101 150 ENSP00000338964/1-662 SCRQDGLTVI VTACLTFATG VTVALVMQIY FGDPQIFQQG AVVTDAARCT BACU015543/1-655 SCRQDGLTVI VTACLTFATG VTVALIMQIY FGDPQIFHQG AVVTDAAHCT ENSBTAP00000017688/1-662 SCRQDGLTVI VTACLTFATG VTVALIMQIY FGDPQIFHQG AVVTDAARCT ENSTTRP00000013452/1-652 SCRQDGLTVI VTACLTFATG VTVALIMQIY FGDPQIFHQG AVVTDAAHCT bmy_00573T0/1-654 SCRQDGLTVI VTACLTFATG VTVALIMQIY FGDPQIFHQG AVVTDAAHCT 151 200 ENSP00000338964/1-662 SLGIEVLSKQ GSSVDAAVAA ALCLGIVAPH SSGLGGGGVM LVHDIRRNES BACU015543/1-655 SLGIEVLSKQ GSSVDAAVAA ALCLGIVAPH SSGLGGGGVM LIHDIRRNKS ENSBTAP00000017688/1-662 SLGIEVLSKQ GSSVDAAVAA ALCLGIVAPH SSGLGGGGVM LVHDIRRNKS ENSTTRP00000013452/1-652 SLGIEVLNKQ GSSVDAAVAA ALCLGIVAPH SSGLGGGGVM LVHDIRRNKS bmy_00573T0/1-654 SLGIEVLSKQ GSSVDAAVAA ALCLGIVAPH SSGLGGGGVM LVHDIRRNKS 201 250 ENSP00000338964/1-662 HLIDFRESAP GALREETLQR SWETK----P GLLVGVPGMV KGLHEAHQLY BACU015543/1-655 HLIDFRESAP GALREEALQR SWETK----- ---VGTLDLL HPLLSGSP-- ENSBTAP00000017688/1-662 HLIDFRESAP GALREEALQR SWETK----P GLLVGVPGMV KGLHEAHQLY ENSTTRP00000013452/1-652 HLIDFRESAP GALREEALQR SWETK----P GLLVGVPGMV KGLHEAHQLY bmy_00573T0/1-654 HLIDFRESAP GALREETLQR SWETKVGTLP GLLVGVPGMV KGLHEAHQLY 251 300 ENSP00000338964/1-662 GRLPWSQVLA FAAAVAQDGF NVTHDLARAL AEQLPPNMSE RFRETFLPSG BACU015543/1-655 -RLPWSQVLA FAAAVAQDGF NMTHDLAQAL AEQPPPNASE RFRETFLPSG ENSBTAP00000017688/1-662 GRLPWSQVLA FAAAVAQDGF NVTHDLAQAL AEQPPPNASD RFRETFLPMG ENSTTRP00000013452/1-652 GRLPWSQVLA FAAAVAQDGF NMTHDLAQAL AEQPPPNASE RFRETFLPLG bmy_00573T0/1-654 GRLPWSQVLA FAAAVAQDGF NMTHDLAQAL AEQPPPNASE RFRETFLPSG 301 350 ENSP00000338964/1-662 RPPLPGSLLH RPDLAEVLDV LGTSGPAAFY AGGNLTLEMV AEAQHAGGVI BACU015543/1-655 HPPLPGSLLR RPDLAAVLDV LGTYGPAAFY AGGNLTLEMV AEAQHAGGVI ENSBTAP00000017688/1-662 HPPLPGSLLR RPDLAAVLEV LGTYGPAAFY AGGNLTLEMV AEAQHAGGVI ENSTTRP00000013452/1-652 HPPLPGSLLR RPDLAAVLDV LGTYGPAAFY AGGNLTLEMV AEAQHAGGVI bmy_00573T0/1-654 HPPLPGSLLR RPDLAAVLDV LGTYGPAAFY AGGNLTLEMV AEAQHAGGVI 351 400 ENSP00000338964/1-662 TEEDFSNYSA LVEKPVCGVY RGHLVLSPPP PHTGPALISA LNILEGFNLT BACU015543/1-655 TEEDFSNYSA LLEKPVCGVY RGHLVLSPRP PHTGPALISA LNILEGFNLT ENSBTAP00000017688/1-662 TEEDFSNYSA LLEKPVCGVY RGHLVLSPRP PHTGPALISA LNILEGFNLT ENSTTRP00000013452/1-652 TEEDFSNYSA LLEKPVCGVY RGHLVLSPRP PHTGPALISA LNILEGFNLT bmy_00573T0/1-654 TEEDFSNYSA LLEKPVCGVY RGHLVLSPRP PHTGPALISA LNILEGFNLT 401 450 ENSP00000338964/1-662 SLVSREQALH WVAETLKIAL ALASRLGDPV YDSTITESMD DMLSKVEAAY BACU015543/1-655 SLVSREQALH WVAETLKIAL ALASRLGDPV YDSTITESMD DMLSKVEAAY ENSBTAP00000017688/1-662 SLVSREQALH WVAETLKIAL ALASRLGDPI YDSTITESMD DMLSKVEAAY ENSTTRP00000013452/1-652 SLVSREQALH WVAETLKIAL ALASRLGDPV YDSTITESMD DMLSKVEAAY bmy_00573T0/1-654 SLVSREQALH WVAETLKIAL ALASRLGDPV YDSTITESMD DMLSKVEAAY 451 500 ENSP00000338964/1-662 LRGHINDSQA APAPLLPVYE LDGAPTAAQV LIMGPDDFIV AMVSSLNQPF BACU015543/1-655 FRGQINDSHT APVPLLPIYE LNGAPTASQV LIMGPDDFIV AMVSSLNRPF ENSBTAP00000017688/1-662 FRGQINDSQA APVPLLPIYE LNGAPTAAQV LIMGPDDFIV AMVSSLNRPF ENSTTRP00000013452/1-652 FRGQINDSQT APVPLLPIYE LNGAPTAAQV LIMGPDDFIV AMVSSLNRPF bmy_00573T0/1-654 FRGQINDSQT APVPLLPIYE LNGAPTAAQV LIMGPDDFIV AMVSSLNRPF 501 550 ENSP00000338964/1-662 GSGLITPSGI LLNSQMLDFS WPNRTANHSA PSLENSVQPG KRPLSFLLPT BACU015543/1-655 GSGLITPSGI LLNSQMLDFS WPNRTANHPA PSLENSVQPG KRPLSFLLPT ENSBTAP00000017688/1-662 GSGLITPSGI LLNSQMLDFS WPNRTANHPA PSLENSVQPG KRPLSFLLPT ENSTTRP00000013452/1-652 GSGLITPSGI LLNSQMLDFS WPNRTANHPA PSLENSVQPG KRPLSFLLPT bmy_00573T0/1-654 GSGLITPSGI LLNSQMLDFS WPNRTANHPA PSLENSVQPG KRPLSFLLPT 551 600 ENSP00000338964/1-662 VVRPAEGLCG TYLALGANGA ARGLSGLTQV LLNVLTLNRN LSDSLARGRL BACU015543/1-655 VVRPAEGLCG TYLALGANGA ARGLSGLTQV LLNVLTLNRN LSDSLARGRL ENSBTAP00000017688/1-662 VVRPAEGLCG TYLALGANGA ARGLSGLTQV LLNVLTLNRN LSDSLARGRL ENSTTRP00000013452/1-652 VVRPAEGLCG TYLALGANGA ARGLSGLTQV LLNVLTLNRN LSDSLARGRL bmy_00573T0/1-654 VVRPAEGLCG TYLALGANGA ARGLSGLTQV LLNVLTLNRN LSDSLARGRL 601 650 ENSP00000338964/1-662 HPDLQSNLLQ VDSEFTEEEI EFLEARGHHV EKVDVLSWVH GSRRTNNFII BACU015543/1-655 HPDLQTNLLQ VDSEFTEEEI EFLEARGHHV EKVDVLSWVH GSRRTNNFII ENSBTAP00000017688/1-662 HPDLQTNLLQ VDSEFTEEEI EFLEARGHHV EKVDVLSWVH GSRRTNNFII ENSTTRP00000013452/1-652 HPD------- ---EFTEEEI EFLEARGHHV EKVDVLSWVH GSRRTNNFII bmy_00573T0/1-654 HPDLQTNLLQ VDT------- -----RGHHV EKVDVLSWVH GSRRTNNFII 651 700 ENSP00000338964/1-662 AVKDPRSPDA AGATIL BACU015543/1-655 GVKDPRSPDA AGATIL ENSBTAP00000017688/1-662 GVKDPRSPDA AGATIL ENSTTRP00000013452/1-652 GVKDPRSPDA AGATIL bmy_00573T0/1-654 GVKDPRSPDA AGATIL