KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:02:32 2014 Check: 00 .. Name: ENSP00000262030/1-529 Len: 560 Check: 8659 Weight: 1.00 Name: ENSBTAP00000017710/1-528 Len: 560 Check: 4000 Weight: 1.00 Name: ENSTTRP00000002011/1-529 Len: 560 Check: 6269 Weight: 1.00 Name: bmy_03910T0/1-559 Len: 560 Check: 626 Weight: 1.00 Name: BACU018266/1-528 Len: 560 Check: 5352 Weight: 1.00 // 1 50 ENSP00000262030/1-529 ---------- ---------- ---------- -MLGFVGRVA AAPASGALRR ENSBTAP00000017710/1-528 ---------- ---------- ---------- -MLGLVGRVV AASASGALRG ENSTTRP00000002011/1-529 ---------- ---------- ---------- -MLGLVGRVA ASTASGAFRG bmy_03910T0/1-559 GHAYCRVGLA PQLWGVGGQT AAALSRHLGS AMLGLVGRVA AATASGALRG BACU018266/1-528 ---------- ---------- ---------- -MLGLVGRVA AATASGALRG 51 100 ENSP00000262030/1-529 LTPSASLPPA QLLLRAAPTA VHPVRDYAAQ TSPSPKAGAA TGRIVAVIGA ENSBTAP00000017710/1-528 LSPSAPLPQA QLLLRAAPAA LQPARDYAAQ ASPSPKAGAT TGRIVAVIGA ENSTTRP00000002011/1-529 LSPSAPLPQV QLLLRAAPAA LHPARDYAAQ TSPSPKAGTA TGRIVAVIGA bmy_03910T0/1-559 LSPSAPLPQV QLLLRAAPAA LQPARDYATQ TSPSPKAGVA TGRIVAVIGA BACU018266/1-528 LSSSAPLPQV QLLLRAAPAA LQPARDYAAQ TSPSPKAGAA TGRIVAVIGA 101 150 ENSP00000262030/1-529 VVDVQFDEGL PPILNALEVQ GRETRLVLEV AQHLGESTVR TIAMDGTEGL ENSBTAP00000017710/1-528 VVDVQFDEGL PPILNALEVQ GRETRLVLEV AQHLGESTVR TIAMDGTEGL ENSTTRP00000002011/1-529 VVDVQFDEGL PPILNALEVQ GRETRLVLEV AQHLGESTVR TIAMDGTEGL bmy_03910T0/1-559 VVDVQFDEGL PPILNALEVQ GRETRLVLEV AQHLGESTVR TIAMDGTEGL BACU018266/1-528 VVDVQFDEGL PPILNALEVQ GRETRLVLEV AQHLGESTVR TIAMDGTEGL 151 200 ENSP00000262030/1-529 VRGQKVLDSG APIKIPVGPE TLGRIMNVIG EPIDERGPIK TKQFAPIHAE ENSBTAP00000017710/1-528 VRGQKVLDSG APIRIPVGPE TLGRIMNVIG EPIDERGPIK TKQFAAIHAE ENSTTRP00000002011/1-529 VRGQKVLDSG APIKIPVGPE TLGRIMNVIG EPIDERGPIK TKQFAAIHAE bmy_03910T0/1-559 VRGQKVLDSG APIRIPVGPE TLGRIMNVIG EPIDERGPIK TKQFAAIHAE BACU018266/1-528 VRGQKVLDSG APIRIPVGPE TLGRIMNVIG EPIDERGPIK TKQFAAIHAE 201 250 ENSP00000262030/1-529 APEFMEMSVE QEILVTGIKV VDLLAPYAKG GKIGLFGGAG VGKTVLIMEL ENSBTAP00000017710/1-528 APEFVEMSVE QEILVTGIKV VDLLAPYAKG GKIGLFGGAG VGKTVLIMEL ENSTTRP00000002011/1-529 APEFMEMSVE QEILVTGIKV VDLLAPYAKG GKIGLFGGAG VGKTVLIMEL bmy_03910T0/1-559 APEFVEMSVE QEILVTGIKV VDLLAPYAKG GKIGLFGGAG VGKTVLIMEL BACU018266/1-528 APEFVEMSVE QEILVTGIKV VDLLAPYAKG GKIGLFGGAG VGKTVLIMEL 251 300 ENSP00000262030/1-529 INNVAKAHGG YSVFAGVGER TREGNDLYHE MIESGVINLK DATSKVALVY ENSBTAP00000017710/1-528 INNVAKAHGG YSVFAGVGER TREGNDLYHE MIESGVINLK DATSKVALVY ENSTTRP00000002011/1-529 INNVAKAHGG YSVFAGVGER TREGNDLYHE MIESGVINLK DATSKVALVY bmy_03910T0/1-559 INNVAKAHGG YSVFAGVGER TREGNDLYHE MIESGVINLK DATSKVALVY BACU018266/1-528 INNVAKAHGG YSVFAGVGER TREGNDLYHE MIESGVINLK DATSKVALVY 301 350 ENSP00000262030/1-529 GQMNEPPGAR ARVALTGLTV AEYFRDQEGQ DVLLFIDNIF RFTQAGSEVS ENSBTAP00000017710/1-528 GQMNEPPGAR ARVALTGLTV AEYFRDQEGQ DVLLFIDNIF RFTQAGSEVS ENSTTRP00000002011/1-529 GQMNEPPGAR ARVALTGLTV AEYFRDQEGQ DVLLFIDNIF RFTQAGSEVS bmy_03910T0/1-559 GQMNEPPGAR ARVALTGLTV AEYFRDQEGQ DVLLFIDNIF RFTQAGSEVS BACU018266/1-528 GQMNEPPGAR ARVALTGLTV AEYFRDQEGQ DVLLFIDNIF RFTQAGSEVS 351 400 ENSP00000262030/1-529 ALLGRIPSAV GYQPTLATDM GTMQERITTT KKGSITSVQA IYVPADDLTD ENSBTAP00000017710/1-528 ALLGRIPSAV GYQPTLATDM GTMQERITTT KKGSITSVQA IYVPADDLTD ENSTTRP00000002011/1-529 ALLGRIPSAV GYQPTLATDM GTMQERITTT KKGSITSVQA IYVPADDLTD bmy_03910T0/1-559 ALLGRIPSAV GYQPTLATDM GTMQERITTT KKGSITSVQA IYVPADDLTD BACU018266/1-528 ALLGRIPSAV GYQPTLATDM GTMQERITTT KKGSITSVQA IYVPADDLTD 401 450 ENSP00000262030/1-529 PAPATTFAHL DATTVLSRAI AELGIYPAVD PLDSTSRIMD PNIVGSEHYD ENSBTAP00000017710/1-528 PAPATTFAHL DATTVLSRAI AELGIYPAVD PLDSTSRIMD PNIVGSEHYD ENSTTRP00000002011/1-529 PAPATTFAHL DATTVLSRAI AELGIYPAVD PLDSTSRIMD PNIVGNEHYD bmy_03910T0/1-559 PAPATTFAHL DATTVLSRAI AELGIYPAVD PLDSTSRIMD PNIVGNEHYD BACU018266/1-528 PAPATTFAHL DATTVLSRAI AELGIYPAVD PLDSTSRIMD PNIVGNEHYD 451 500 ENSP00000262030/1-529 VARGVQKILQ DYKSLQDIIA ILGMDELSEE DKLTVSRARK IQRFLSQPFQ ENSBTAP00000017710/1-528 VARGVQKILQ DYKSLQDIIA ILGMDELSEE DKLTVSRARK IQRFLSQPFQ ENSTTRP00000002011/1-529 VARGVQKILQ DYKSLQDIIA ILGMDELSEE DKLTVSRARK IQRFLSQPFQ bmy_03910T0/1-559 VARGVQKILQ DYKSLQDIIA ILGMDELSEE DKLTVSRARK IQRFLSQPFQ BACU018266/1-528 VARGVQKILQ DYKSLQDIIA ILGMDELSEE DKLTVSRARK IQRFLSQPFQ 501 550 ENSP00000262030/1-529 VAEVFTGHMG KLVPLKETIK GFQQILAGEY DHLPEQAFYM VGPIEEAVAK ENSBTAP00000017710/1-528 VAEVFTGHLG KLVPLKETIK GFQQILAGEY DHLPEQAFYM VGPIEEAVAK ENSTTRP00000002011/1-529 VAEVFTGHMG KLVPLKETIK GFQQILAGEY DHLPEQAFYM VGPIEEAVAK bmy_03910T0/1-559 VAEVFTGHMG KLVPLKETIK GFQQILAGEY DHLPEQAFYM VGPIEEAVAK BACU018266/1-528 VAEVFTGHMG KLVPLKETIK GFQQILAGEY DHLPEQAFYM VGPIEEAVAK 551 600 ENSP00000262030/1-529 ADKLAEEHSS ENSBTAP00000017710/1-528 ADKLAEEHS- ENSTTRP00000002011/1-529 ADKLAEEHSR bmy_03910T0/1-559 ADKLAEEHS- BACU018266/1-528 ADKLAEEHS-