KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:02:44 2014 Check: 00 .. Name: ENSP00000361883/1-475 Len: 576 Check: 4344 Weight: 1.00 Name: ENSBTAP00000017775/1-471 Len: 576 Check: 6973 Weight: 1.00 Name: BACU000401/1-556 Len: 576 Check: 1176 Weight: 1.00 Name: bmy_02084T0/1-576 Len: 576 Check: 9295 Weight: 1.00 Name: ENSTTRP00000004098/1-475 Len: 576 Check: 3274 Weight: 1.00 // 1 50 ENSP00000361883/1-475 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000017775/1-471 ---------- ---------- ---------- ---------- ---------- BACU000401/1-556 MPRNAALGPS APADASPYPA SAGPPETLSR AMASPRHKRG NRVKQQNHSL bmy_02084T0/1-576 MPRNAGSSPS ATADPSPHQA SAGPPETLSR AMASPRHKRG NRVKQQXHSL ENSTTRP00000004098/1-475 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000361883/1-475 ---------- ---------- ---------- ----MADMQN LVERLERAVG ENSBTAP00000017775/1-471 ---------- ---------- ---------- ----MADMRN LVERLERVVG BACU000401/1-556 FSIESLQVQV KDGKEGSKIH EAVLLNFSD- WCYIMADMQN LVERLERAVG bmy_02084T0/1-576 FSIESLQVQV KDGKEGSKIH EAVLLSFSDC RCYIMADMQN LVERLERAVG ENSTTRP00000004098/1-475 ---------- ---------- ---------- ----MADMQN LVERLERAVG 101 150 ENSP00000361883/1-475 RLEAVSHTSD MHRGYADSPS KAGAAPYVQA FDSLLAGPVA EYLKISKEIG ENSBTAP00000017775/1-471 RLEAVSHASD THCGYGDSAA K-GTTPYVQA FDSLLAGPVA EYLKISKEIG BACU000401/1-556 RLEAVSQASG TRCGYADGAA K--------- ---------- EYLKISKEIG bmy_02084T0/1-576 RLEAVSQASG THCGYADDAA KAGTTPYVQA FDSLLAGPVA EYLKISKEIG ENSTTRP00000004098/1-475 RLEAVSQASD MHCGYADSAA KAGTTPYVQA FDSLLAGPVA EYLKISKEIG 151 200 ENSP00000361883/1-475 GDVQKHAEMV HTGLKLERAL LVTASQCQQP AENKLSDLLA PISEQIKEVI ENSBTAP00000017775/1-471 GDVQKHAEMV HTGLKLERAL LVTASQCQQP AGNKLSDLLA PISEQIQEVV BACU000401/1-556 GDVQKHAEMV HTGLKLERAL LVTASQCQKP AGNKLSDLLA PISEQIQEVI bmy_02084T0/1-576 GDVQKHAEMV HTGLKLERAL LVTASQCQKP AGNKLSDLLA PISEQIQEVI ENSTTRP00000004098/1-475 GDVQKHAEMV HTGLKLERAL LVTASQCQQP AGNKLSDLLA PISEQIQEVI 201 250 ENSP00000361883/1-475 TFREKNRGSK LFNHLSAVSE SIQALGWVAM APKPGPYVKE MNDAAMFYTN ENSBTAP00000017775/1-471 TFREKNRGSK LFNHLSAVSE SIQALGWVAM APKPGPYVKE MNDAAMFYTN BACU000401/1-556 TFREKNRGSK LFNHLSGVSE SIQALGWVAM SPKPGPYVKE MNDAAMFYTN bmy_02084T0/1-576 TFREKNRGSK LFNHLSGVSE SIQALGWVAM SPKPGPYVKE MNDAAMFYTN ENSTTRP00000004098/1-475 TFREKNRGSK LFNHLSGVSE SIQALGWVAM APKPGPYVKE MNDAAMFYTN 251 300 ENSP00000361883/1-475 RVLKEYKDVD KKHVDWVKAY LSIWTELQAY IKEFHTTGLA WSKTGPVAKE ENSBTAP00000017775/1-471 RVLKEYKDVD KKHVDWVKAY LSIWTELQAY IKEFHTTGLA WSRTGPVAKE BACU000401/1-556 RVLKEYKDVD KKHVDWVRAY LSIWTELQAY IKEFHSTGLA WSKTGPVAKE bmy_02084T0/1-576 RVLKEYKDVD KKHVDWVRAY LSIWTELQAY IKEFHSTGLA WSKTGPVAKE ENSTTRP00000004098/1-475 RVLKEYKDVD KKHVDWVKAY LSIWTELQAY IKEFHATGLA WSKTGPVAKE 301 350 ENSP00000361883/1-475 LSGLPSGPSA GSCPPPPPPC PPPPPVSTIS CSYESASRSS LFAQINQGES ENSBTAP00000017775/1-471 LSGLPSGPSA GSGPPPPPPG PPPPPVPTSS GSDDSASRSA LFAQINQGES BACU000401/1-556 LSGLPSGPSA GSGPPPPPPG PPPPPVPTSS GSDESASRSA LFAQINQGES bmy_02084T0/1-576 LSGLPSGPSA GSGPPPPPPG PPPPQVPTSS GSDESASRSA LFAQINQGES ENSTTRP00000004098/1-475 LSGLPSGPSA GSGPPPPPPG PPPPPAPTSS GSDESASRSA LFAQINQGES 351 400 ENSP00000361883/1-475 ITH------- ---------- ALKHVSDDMK THKNPALKAQ SGPVRSGPKP ENSBTAP00000017775/1-471 ITH------- ---------- ALKHVSDDMK THKNPALKAQ SGLIRSGPKP BACU000401/1-556 ITHAQSPGIK DRNKAAVVLT ALKHVSDDLK THKNPALKTQ SAPVRSGPKP bmy_02084T0/1-576 ITHAQSPGMK DRNKAAVVLT ALKHVSDDLK THKNPALKTQ SAPVRSGPKP ENSTTRP00000004098/1-475 ITH------- ---------- ALKHVSDDLK THKNPALKAQ SAPVRSGPKP 401 450 ENSP00000361883/1-475 FSAPKPQTSP SPKRATKKEP AVLELEGKKW RVENQENVSN LVIEDTELKQ ENSBTAP00000017775/1-471 FSASKPD--- PPKPVAKKEP ALLELEGKKW RVENQENVSN LMIEDTELKQ BACU000401/1-556 FSASKPGVSP CPKPVTKKEP ALLELEGKKW RVENQENVSN LVIDDTELKQ bmy_02084T0/1-576 FSASKPVVSP SPKPVTKKEP ALLELEGKKW RVENQENVSN LVIDDTELKQ ENSTTRP00000004098/1-475 FSASKPGVSP SPKPVTKKEP ALLELEGKKW RVENQENVSN LVIDDTELKQ 451 500 ENSP00000361883/1-475 VAYIYKCVNT TLQIKGKINS ITVDNCKKLG LVFDDVVGIV EIINSKDVKV ENSBTAP00000017775/1-471 VAYIFKCVNS TLQIKGKINS ITVDNCKKLG LVFDDVVGIV EIINSKDVKV BACU000401/1-556 VAYIFKCVNS TLQIKGKINS ITVDNCKKLG LVFDDVVGIV EIINSRDVKV bmy_02084T0/1-576 VAYIFKCVNS TLQIKGKINS ITVDNCKKLG LVFDDVVGIV EIINSRDVKV ENSTTRP00000004098/1-475 VAYIFKCVNS TLQIKGKINS ITVDNCKKLG LVFDDVVGIV EIINSRDVKV 501 550 ENSP00000361883/1-475 QVMGKVPTIS INKTDGCHAY LSKNSLDCEI VSAKSSEMNV LIPTEGGDFN ENSBTAP00000017775/1-471 QVMGKVPTIS INKTDGCHVY LSKNSLDCEI VSAKSSEMNV LIPTEGGDFN BACU000401/1-556 QVMGKVPTIS INKTDGCHVY LSKNSLDCEI VSAKSSEMNV LIPTEGDDFN bmy_02084T0/1-576 QVMGKVPTIS INKTDGCHVY LSKNSLDCEI VSAKSSEMNV LIPTEGDDFN ENSTTRP00000004098/1-475 QVMGKVPTIS INKTDGCHVY LSKNSLDCEI VSAKSSEMNV LIPTEGDDFN 551 600 ENSP00000361883/1-475 EFPVPEQFKT LWNGQKLVTT VTEIAG ENSBTAP00000017775/1-471 EFPVPEQFKT LWNGQKLVTT VTEIAG BACU000401/1-556 EFPVPEQFKT VWNGRKLVTT VTEIAG bmy_02084T0/1-576 EFPVPEQFKT VWNGRKLVTT VTEIAG ENSTTRP00000004098/1-475 EFPVPEQFKT IWNGRKLVTT VTEIAG