KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:02:45 2014 Check: 00 .. Name: ENSP00000394863/1-306 Len: 306 Check: 3679 Weight: 1.00 Name: ENSBTAP00000017780/1-306 Len: 306 Check: 2613 Weight: 1.00 Name: ENSTTRP00000004084/1-305 Len: 306 Check: 2566 Weight: 1.00 Name: bmy_02083T0/1-256 Len: 306 Check: 2445 Weight: 1.00 Name: BACU018881/1-306 Len: 306 Check: 3241 Weight: 1.00 // 1 50 ENSP00000394863/1-306 MASPGCLWLL AVALLPWTCA SRALQHLDPP APLPLVIWHG MGDSCCNPLS ENSBTAP00000017780/1-306 MASSSCLWLL ALAFLLGSCA SLALGHLDPP APLPLVIWHG MGDSCCNPLS ENSTTRP00000004084/1-305 MASSSSLWLL ALAFLPGSCA SLALGHLDPP APLPLVIWHG MGDSCCNPLS bmy_02083T0/1-256 MASSSFLRLL ALAFLPASCA SLALGHLDPP APLPLVIWHG M--------- BACU018881/1-306 MASSSSLWLL ALAFLPASCA SLALGHLDPP APLPLVIWHG MGDSCCNPLS 51 100 ENSP00000394863/1-306 MGAIKKMVEK KIPGIYVLSL EIGKTLMEDV ENSFFLNVNS QVTTVCQALA ENSBTAP00000017780/1-306 MGAIKKMVEK KIPGIHVLSL EIGKTLREDV ENSFFLNVNS QVTTVCQILA ENSTTRP00000004084/1-305 MGAVKKMVEK KIPGIYVLSL EIGKTLVEDV ENSFFLNVNS QVTTVCQILA bmy_02083T0/1-256 ---------- ---------- ---------- ---------- -VTTVCQILA BACU018881/1-306 MGAIKKMVEK KIPGIYVLSL EIGKTLVEDV ENSFFLNVNS QVTTVCQILA 101 150 ENSP00000394863/1-306 KDPKLQQGYN AMGFSQGGQF LRAVAQRCPS PPMINLISVG GQHQGVFGLP ENSBTAP00000017780/1-306 KDPKLQQGYN AMGFSQGGQF LRAVAQRCPS PPMVNLISVG GQHQGVFGLP ENSTTRP00000004084/1-305 KDPKLQQGYN AMGFSQGGQF LRAVAQRCPS -PMINLISVG GQHQGVFGLP bmy_02083T0/1-256 KDPKLQQGYN AMGFSQGGQF LRAVVQRCPS PPMINLISVG GQHQGVFGLP BACU018881/1-306 KDPKLQQGYN AMGFSQGGQF LRAVVQRCPS PPMINLISVG GQHQGVFGLP 151 200 ENSP00000394863/1-306 RCPGESSHIC DFIRKTLNAG AYSKVVQERL VQAEYWHDPI KEDVYRNHSI ENSBTAP00000017780/1-306 RCPGESSHIC DFIRKTLNAG AYNKAIQECL VQAEYWHDPI REDIYRNHSI ENSTTRP00000004084/1-305 RCPGESSHIC DLIRKTLNAG AYNKAIQERL VQAEYWHDPI KEDMYRNHSI bmy_02083T0/1-256 RCPGESSHIC DLIRKTLNAG AYNKAIQERL VQAEYWHDPI KEDIYRNHSI BACU018881/1-306 RCPGESSHIC DLIRKTLNAG AYNKAIQERL VQAEYWHDPI KEDIYRNHSI 201 250 ENSP00000394863/1-306 FLADINQERG INESYKKNLM ALKKFVMVKF LNDSIVDPVD SEWFGFYRSG ENSBTAP00000017780/1-306 FLADINQERG VNESYKKNLM ALKKFVMVKF LNDTIVDPVD SEWFGFYRSG ENSTTRP00000004084/1-305 FLADINQERG VNESYKKNLM ALKKFVMVKF LNDSIVDPVD SEWFGFYRSG bmy_02083T0/1-256 FLADINQERG VNESYKKNLM ALKKFVMVKF LNDSIVDPVD SEWFGFYRSG BACU018881/1-306 FLADINQERG VNESYKKNLM ALKKFVMVKF LNDSIVDPVD SEWFGFYRSG 251 300 ENSP00000394863/1-306 QAKETIPLQE TSLYTQDRLG LKEMDNAGQL VFLATEGDHL QLSEEWFYAH ENSBTAP00000017780/1-306 QAKETIPLQE STLYTQDRLG LKAMDKAGQL VFLALEGDHL QLSEEWFYAH ENSTTRP00000004084/1-305 QAKETIPLQE STLYTQDRLG LKAMDNAGQL VFLALEGDHL QLSEAWFYAH bmy_02083T0/1-256 QAKETIPLQE STLYTQDRLG LKAMDNAGQL VFLALEGDHL QLSEAWFYAH BACU018881/1-306 QAKETIPLQE STLYTQDRLG LKAMDNAGQL VFLALEGDHL QLSEAWFYAH 301 350 ENSP00000394863/1-306 IIPFLG ENSBTAP00000017780/1-306 IIPFLE ENSTTRP00000004084/1-305 IIPFLE bmy_02083T0/1-256 IIPFLE BACU018881/1-306 IIPFLE