KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:02:50 2014 Check: 00 .. Name: bmy_05718T0/1-319 Len: 520 Check: 8539 Weight: 1.00 Name: BACU018595/1-464 Len: 520 Check: 621 Weight: 1.00 Name: ENSTTRP00000002074/1-473 Len: 520 Check: 258 Weight: 1.00 Name: ENSP00000284268/1-492 Len: 520 Check: 8068 Weight: 1.00 Name: ENSBTAP00000017818/1-492 Len: 520 Check: 7339 Weight: 1.00 // 1 50 bmy_05718T0/1-319 ---------- ---------- ---------- ---------- -------MLA BACU018595/1-464 ---------- ---------- --------FP PQALNRGIAA VKEDAVEMLA ENSTTRP00000002074/1-473 ---------- ---------L GITNIAIDFG EQALNRGIAA VKEDAVEMLA ENSP00000284268/1-492 MVKFPALTHY WPLIRFLVPL GITNIAIDFG EQALNRGIAA VKEDAVEMLA ENSBTAP00000017818/1-492 MVKFPALTHY WPLIRFLVPL GITNIAIDFG EQALNRGIAA VKEDAVEMLA 51 100 bmy_05718T0/1-319 SYGLAYSLMK FFTGPMSDFK NVGLVFVNSK RDRTKAVLCM VVAGAIAAVF BACU018595/1-464 SYGLAYSLMK FFTGPMSDFK NVGLVFVNSK RDRTKAVLCM VVAGAIAAVF ENSTTRP00000002074/1-473 SYGLAYSLMK FFTGPMSDFK NVGLVFVNSK RDRTKAVLCM VVAGAIAAVF ENSP00000284268/1-492 SYGLAYSLMK FFTGPMSDFK NVGLVFVNSK RDRTKAVLCM VVAGAIAAVF ENSBTAP00000017818/1-492 SYGLAYSLMK FFTGPMSDFK NVGLVFVNSK RDRTKAVLCM VVAGAIAAVF 101 150 bmy_05718T0/1-319 HTLIAYSDLG YYIINKLHHV DES------- ---------- ----AWTHAG BACU018595/1-464 HTLIAYSDLG YYIINKLHHV DESVGNKTRR AFLYLAAFPF MDAMAWTHAG ENSTTRP00000002074/1-473 HTLIAYSDLG YYIINKLHHV DESVGNKTRR AFLYLAAFPF MDAMAWTHAG ENSP00000284268/1-492 HTLIAYSDLG YYIINKLHHV DESVGSKTRR AFLYLAAFPF MDAMAWTHAG ENSBTAP00000017818/1-492 HTLIAYSDLG YYIINKLHHV DESVGNKTRR AFLYLAAFPF MDAMAWTHAG 151 200 bmy_05718T0/1-319 ILLKHKYSFL VGCASISDVI AQVVFVAILL HSHLECREPL LIPILSLYMG BACU018595/1-464 ILLKHKYSFL VGCASISDVI AQVVFVAILL HSHLECREPL LIPILSLYMG ENSTTRP00000002074/1-473 ILLKHKYSFL VGCASISDVI AQVVFVAILL HSHLECREPL LIPILSLYMG ENSP00000284268/1-492 ILLKHKYSFL VGCASISDVI AQVVFVAILL HSHLECREPL LIPILSLYMG ENSBTAP00000017818/1-492 ILLKHKYSFL VGCASISDVI AQVVFVAILL HSHLECREPL LIPILSLYMG 201 250 bmy_05718T0/1-319 ALVRCTALCL GYYKNIHDII PDRSGPELGG DATIRKMLSF WWPLALILAT BACU018595/1-464 ALVRCTALCL GYYKNIHDII PDRSGPELGG DATIRKMLSF WWPLALILAT ENSTTRP00000002074/1-473 ALVRCTTLCL GYYKNIHDII PDRSGPELGG DATIRKMLSF WWPLALILAT ENSP00000284268/1-492 ALVRCTTLCL GYYKNIHDII PDRSGPELGG DATIRKMLSF WWPLALILAT ENSBTAP00000017818/1-492 ALVRCTTLCL GYYKNIHDII PDRSGPELGG DATIRKMLSF WWPLALILAT 251 300 bmy_05718T0/1-319 QRISRPIVNL FVSRDLGGSS AATEAVAILT ATYPVGHMPY GWLTEIRAVY BACU018595/1-464 QRISRPIVNL FVSRDLGGSS AATEAVAILT ATYPVGHMPY GWLTEIRAVY ENSTTRP00000002074/1-473 QRISRPIVNL FVSRDLGGSS AATEAVAILT ATYPVGHMPY GWLTEIRAVY ENSP00000284268/1-492 QRISRPIVNL FVSRDLGGSS AATEAVAILT ATYPVGHMPY GWLTEIRAVY ENSBTAP00000017818/1-492 QRISRPIVNL FVSRDLGGSS AATEAVAILT ATYPVGHMPY GWLTEIRAVY 301 350 bmy_05718T0/1-319 PAFDKVRTPC GMVSETHSLK LAFDRQGSPL TDANNPSNKL VSTSNTVTAA BACU018595/1-464 PAFDK----- ---------- ---------- ---NNPSNKL VSTSNTVTAA ENSTTRP00000002074/1-473 PAFDK----- ---------- ---------- ---NNPSNKL VSTSNAVTAA ENSP00000284268/1-492 PAFDK----- ---------- ---------- ---NNPSNKL VSTSNTVTAA ENSBTAP00000017818/1-492 PAFDK----- ---------- ---------- ---NNPSNKL VSTSNTVTAA 351 400 bmy_05718T0/1-319 HIKKFTFVCM ALSLT----- ---------- ---------- --------VR BACU018595/1-464 HIKKFTFVCM ALSLTLCFVM FWTPNVSEKI LIDIIGVDFA FAELCVVPLR ENSTTRP00000002074/1-473 HIKKFTFVCM ALSLTLCFVM FWTPNVSEKI LIDIIGVDFA FAELCVVPLR ENSP00000284268/1-492 HIKKFTFVCM ALSLTLCFVM FWTPNVSEKI LIDIIGVDFA FAELCVVPLR ENSBTAP00000017818/1-492 HIKKFTFVCM ALSLTLCFVM FWTPNVSEKI LIDIIGVDFA FAELCVVPLR 401 450 bmy_05718T0/1-319 RDPSPPPPV- ---------- -----FVFGK GGSL------ ------PF-- BACU018595/1-464 IFSFFPVPVT VRAHLTGWLM TLKKTFVLAP SSVLRIIVLI TSLVVLPYLG ENSTTRP00000002074/1-473 IFSFFPVPVT VRAHLTGWLM TLKKTFVLAP SSVLRIIVLI TSLVVLPYLG ENSP00000284268/1-492 IFSFFPVPVT VRAHLTGWLM TLKKTFVLAP SSVLRIIVLI ASLVVLPYLG ENSBTAP00000017818/1-492 IFSFFPVPVT VRAHLTGWLM TLKKTFVLAP SSVLRIIVLI TSLVVLPYLG 451 500 bmy_05718T0/1-319 ---------- ---------- ---------- ---------- ---------- BACU018595/1-464 VHGATLGVGS LLAGFVGEST MVAIAACYVY RKQKKKMENE SAAEGEDSAM ENSTTRP00000002074/1-473 VHGATLGVGS LLAGFVGEST MVAIAACYVY RKQKKKMENE SAADGEDSAM ENSP00000284268/1-492 VHGATLGVGS LLAGFVGEST MVAIAACYVY RKQKKKMENE SATEGEDSAM ENSBTAP00000017818/1-492 VHGATLGVGS LLAGFVGEST MVAIAACYVY RKQKKKMENE SAAEGEDSAM 501 550 bmy_05718T0/1-319 ---------- ---------- BACU018595/1-464 TDLPPAEEGT DVVEMQEERD ENSTTRP00000002074/1-473 TDVPPAEEGT DAVEMQEGRE ENSP00000284268/1-492 TDMPPTEEVT DIVEMREENE ENSBTAP00000017818/1-492 TDIPPAEEGT DIVEMREEQE