KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:03:03 2014 Check: 00 .. Name: BACU003217/1-404 Len: 466 Check: 485 Weight: 1.00 Name: bmy_17840T0/1-444 Len: 466 Check: 8830 Weight: 1.00 Name: ENSP00000299259/1-450 Len: 466 Check: 3520 Weight: 1.00 Name: ENSBTAP00000017862/1-450 Len: 466 Check: 3520 Weight: 1.00 Name: ENSTTRP00000000434/1-447 Len: 466 Check: 2976 Weight: 1.00 // 1 50 BACU003217/1-404 MSDMEDDFMC DDEEDYDLEY SEDSNSEPNV DLENQYYNSK ALKEDDPKAA bmy_17840T0/1-444 NTQ------- --------EY SEDSNSEPNV DLENQYYNSK ALKEDDPKAA ENSP00000299259/1-450 MSDMEDDFMC DDEEDYDLEY SEDSNSEPNV DLENQYYNSK ALKEDDPKAA ENSBTAP00000017862/1-450 MSDMEDDFMC DDEEDYDLEY SEDSNSEPNV DLENQYYNSK ALKEDDPKAA ENSTTRP00000000434/1-447 MSDMEDDFMC DDEEDYDLEY SEDSNSEPNV DLENQYYNSK ALKEDDPKAA 51 100 BACU003217/1-404 LSSFQKVLEL EGEKGEWGFK ALKQMIKINF KLTNFPEMMN RYKQLLTYIR bmy_17840T0/1-444 LSSFQKVLEL EGEKGEWGFK ALKQMIKINF KLTNFPEMMN RYKQLLTYIR ENSP00000299259/1-450 LSSFQKVLEL EGEKGEWGFK ALKQMIKINF KLTNFPEMMN RYKQLLTYIR ENSBTAP00000017862/1-450 LSSFQKVLEL EGEKGEWGFK ALKQMIKINF KLTNFPEMMN RYKQLLTYIR ENSTTRP00000000434/1-447 LSSFQKVLEL EG-KGEWGFK ALKQMIKINF KLTNFPEMMN RYKQLLTYIR 101 150 BACU003217/1-404 SAVTRNYSEK SINSILDYIS TSK------- QMDLLQEFYE TTLEALKDAK bmy_17840T0/1-444 SAVTRNYSEK SINSILDYIS TSK------- QMDLLQEFYE TTLEALKDAK ENSP00000299259/1-450 SAVTRNYSEK SINSILDYIS TSKQNSDFLC QMDLLQEFYE TTLEALKDAK ENSBTAP00000017862/1-450 SAVTRNYSEK SINSILDYIS TSKQNSDFLC QMDLLQEFYE TTLEALKDAK ENSTTRP00000000434/1-447 SAVTRNYSEK SINSILDYIS TSKQNSDFLC QMDLLQEFYE TTLEALKDAK 151 200 BACU003217/1-404 NDRLWFKTNT KLGKLYLERE EYGKLQKILR QLHQSCQTDD GEDDLKKGTQ bmy_17840T0/1-444 NDRLWFKTNT KLGKLYLERE EYGKLQKILR QLHQSCQTDD GEDDLKKGTQ ENSP00000299259/1-450 NDRLWFKTNT KLGKLYLERE EYGKLQKILR QLHQSCQTDD GEDDLKKGTQ ENSBTAP00000017862/1-450 NDRLWFKTNT KLGKLYLERE EYGKLQKILR QLHQSCQTDD GEDDLKKGTQ ENSTTRP00000000434/1-447 NDRLWFKTNT KLGKLYLERE EYGKLQKILR QLHQSCQTDD GEDDLKKGTQ 201 250 BACU003217/1-404 LLEIYALEIQ MYTAQKNNKK LKALYEQSLH IKSAIPHPLI MGVIRGKFGL bmy_17840T0/1-444 LLEIYALEIQ MYTAQKNNKK LKALYEQSLH IKSAIPHPLI MGVIRGKFGL ENSP00000299259/1-450 LLEIYALEIQ MYTAQKNNKK LKALYEQSLH IKSAIPHPLI MGVIR----- ENSBTAP00000017862/1-450 LLEIYALEIQ MYTAQKNNKK LKALYEQSLH IKSAIPHPLI MGVIR----- ENSTTRP00000000434/1-447 LLEIYALEIQ MYTAQKNNKK LKALYEQSLH IKSAIPHPLI MGVIR----- 251 300 BACU003217/1-404 ERVGSVMGRY QECGGKMHLR EGEFEKAHTD FFEAFKNYDE SGSPRRTTCL bmy_17840T0/1-444 ERVGSVMGRY QECGGKMHLR EGEFEKAHTD FFEAFKNYDE SGSPRRTTCL ENSP00000299259/1-450 ---------- -ECGGKMHLR EGEFEKAHTD FFEAFKNYDE SGSPRRTTCL ENSBTAP00000017862/1-450 ---------- -ECGGKMHLR EGEFEKAHTD FFEAFKNYDE SGSPRRTTCL ENSTTRP00000000434/1-447 ---------- -ECGGKMHLR EGEFEKAHTD FFEAFKNYDE SGSPRRTTCL 301 350 BACU003217/1-404 KYLVLANMLM KSGINPFDSQ EAKPYKNDPE ILAMTNLVSA YQNNDITEFE bmy_17840T0/1-444 KYLVLANMLM KSGINPFDSQ EAKPYKNDPE ILAMTNLVSA YQNNDITEFE ENSP00000299259/1-450 KYLVLANMLM KSGINPFDSQ EAKPYKNDPE ILAMTNLVSA YQNNDITEFE ENSBTAP00000017862/1-450 KYLVLANMLM KSGINPFDSQ EAKPYKNDPE ILAMTNLVSA YQNNDITEFE ENSTTRP00000000434/1-447 KYLVLANMLM KSGINPFDSQ EAKPYKNDPE ILAMTNLVSA YQNNDITEFE 351 400 BACU003217/1-404 KILKTNHSNI MDDPFIREHI EELLRNIRTQ VLIKLIKPYT RIHIPFISKV bmy_17840T0/1-444 KILKTNHSNI MDDPFIREHI EELLRNIRTQ VLIKLIKPYT RIHIPFISKE ENSP00000299259/1-450 KILKTNHSNI MDDPFIREHI EELLRNIRTQ VLIKLIKPYT RIHIPFISKE ENSBTAP00000017862/1-450 KILKTNHSNI MDDPFIREHI EELLRNIRTQ VLIKLIKPYT RIHIPFISKE ENSTTRP00000000434/1-447 KILKTNHSNI M-DPFIW-HI EELLRNIRTQ VLIKLIKPYT RIHIPFISKE 401 450 BACU003217/1-404 L--------- ----LFIDFN IYNL------ ---------- ---------- bmy_17840T0/1-444 LNIDVADVES LLVQCILDNT IHGRIDQVNQ LLELDHQKRG GARYTALDKW ENSP00000299259/1-450 LNIDVADVES LLVQCILDNT IHGRIDQVNQ LLELDHQKRG GARYTALDKW ENSBTAP00000017862/1-450 LNIDVADVES LLVQCILDNT IHGRIDQVNQ LLELDHQKRG GARYTALDKW ENSTTRP00000000434/1-447 LNIDVADVES LLVQCILDNT IHGRIDQVNQ LLELDHQKRG GARYTALDKW 451 500 BACU003217/1-404 ---------- ------ bmy_17840T0/1-444 TNQLNSLNQA VVSKLA ENSP00000299259/1-450 TNQLNSLNQA VVSKLA ENSBTAP00000017862/1-450 TNQLNSLNQA VVSKLA ENSTTRP00000000434/1-447 TNQLNSLNQA VVSKLA