KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:03:04 2014 Check: 00 .. Name: ENSP00000327599/1-293 Len: 599 Check: 2003 Weight: 1.00 Name: ENSTTRP00000014035/1-293 Len: 599 Check: 1841 Weight: 1.00 Name: ENSBTAP00000017867/1-290 Len: 599 Check: 903 Weight: 1.00 Name: bmy_11782T0/1-239 Len: 599 Check: 230 Weight: 1.00 Name: BACU002543/1-523 Len: 599 Check: 4979 Weight: 1.00 // 1 50 ENSP00000327599/1-293 MDTTRYSKWG GSSEEVPGGP WGRWVHWSRR PLFLALAVLV TTVLWAVILS ENSTTRP00000014035/1-293 MDMAGYSRWD GRLEEVPGXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000017867/1-290 MDIDGYSKWD GRLEEVPGGH LGR---WGRR PLFLLFALVV ITVLWALILS bmy_11782T0/1-239 MDTVGYSKWD GRLEEVHGGH WGR---WGQR PLLLALALLV VTILWALVLS BACU002543/1-523 MDTVGYSKWD GRLEEVPGG- ---------- ---------- ---------- 51 100 ENSP00000327599/1-293 ILLSKASTER AALLDGHDLL RTNASKQTAA LGALKEEVGD CHSCCSGTQA ENSTTRP00000014035/1-293 XXXXXXSTER RALLGQQDLL RTNSSKQTAV LGVLKEEVRA CNSCCLGTQA ENSBTAP00000017867/1-290 VLFSKASTER GALLDLQDGL SANASKQTAV LGILEEEVRA CNSCCLRTQA bmy_11782T0/1-239 VLFSKASTER GALLGQQDLL RTN------- ---------- ----CLGTQA BACU002543/1-523 ---------- ---------- ---------- ---------- -----LGTQA 101 150 ENSP00000327599/1-293 QLQTTRAELG EAQAKLMEQE SALRELRERV TQGLAEAGRG REDVRTELFR ENSTTRP00000014035/1-293 QLQTVHTKLR EAQSKLIQQE SALKELSERX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000017867/1-290 QLQTVSKELT EARSKLLQQE SALKELSERV TQNLAEAGRD RENIRTELFR bmy_11782T0/1-239 QLQTVRTKLR EAQSKLIQQE SALKELSER- ---------- ---------- BACU002543/1-523 QLQTVRTKLR EAQSKLIQQE SALKELSERV TQSLAEAGRD RENIRSELFR 151 200 ENSP00000327599/1-293 ALEAVRLQNN SCEPCPTSWL SFEGSCYFFS VPKTTWAAAQ DHCADASAHL ENSTTRP00000014035/1-293 XXXXXXXXXX SCEECPKSWL PFQGSCYLFS TQRATWVEAQ RHCEGAGAHL ENSBTAP00000017867/1-290 ALEQARLGNS SCKECPESWL PFQGSCYFFS TLRATWVEAQ QHCERSGAHL bmy_11782T0/1-239 ---------S SCEECPKSWL PFQGSCYLFS TQRATWVEAQ XHCEGARAHL BACU002543/1-523 ALEGVRLGNR SCEECPKSWL PFQGSCYLFS TQRATWVEAQ RHCEGARAHL 201 250 ENSP00000327599/1-293 VIVGGLDEQG FLTRNTRGRG YWLGLRAVRH LGKVQGYQWV DGVSLSFSHW ENSTTRP00000014035/1-293 VIVGGLDEQV FLSRNTGGRG YWLGLRAVRR ARRIRGYQWV DGVPLSFSHW ENSBTAP00000017867/1-290 VIVGGLEEQG FLSRNTRGRG YWLGLRAVRK VRRIQGYQWV DGVALSFSHW bmy_11782T0/1-239 VIVGGLDEQG FLSRNIGSRG YWLGLRAVRR ARRIQGYQWV DGVPLSFSYW BACU002543/1-523 VIVGGLDEQG FLSRNIGGRG YWLGLRAVRR ARRIQGYQWV DGVPLSFSYW 251 300 ENSP00000327599/1-293 NQGEPNDAWG RENCVMMLHT GLWNDAPCDS EKDGWI---- ---------- ENSTTRP00000014035/1-293 NQGEPNDSLG REDCIMILRT GMWNDAPCDN RDDSWI---- ---------- ENSBTAP00000017867/1-290 NRGEPNDSMG REDCIMMLRT GMWNDAPCDN ENDNWI---- ---------- bmy_11782T0/1-239 NQGEPNDSLG REDCIMILRT GMWNDAPCDN RDDSWI---- ---------- BACU002543/1-523 NQGEPNDSLG REDCIMILRT GMWNDAPCDN RDDSWIFHLQ NTYCVPVPRM 301 350 ENSP00000327599/1-293 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000014035/1-293 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000017867/1-290 ---------- ---------- ---------- ---------- ---------- bmy_11782T0/1-239 ---------- ---------- ---------- ---------- ---------- BACU002543/1-523 PYHTASRGLQ GRTSAAAHPQ FTDEQTESLI RGEARTQLQI PGRAVTVPAK 351 400 ENSP00000327599/1-293 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000014035/1-293 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000017867/1-290 ---------- ---------- ---------- ---------- ---------- bmy_11782T0/1-239 ---------- ---------- ---------- ---------- ---------- BACU002543/1-523 WAALTDWETA RNLKQLEEAT AQKVSQVSKD LERHKGDQMA QKSQGDPKDS 401 450 ENSP00000327599/1-293 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000014035/1-293 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000017867/1-290 ---------- ---------- ---------- ---------- ---------- bmy_11782T0/1-239 ---------- ---------- ---------- ---------- ---------- BACU002543/1-523 GEEAKGGLGG ESENFLTTKS PPLQSAAQML QDMERIQAEQ KRMESQESEL 451 500 ENSP00000327599/1-293 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000014035/1-293 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000017867/1-290 ---------- ---------- ---------- ---------- ---------- bmy_11782T0/1-239 ---------- ---------- ---------- ---------- ---------- BACU002543/1-523 SRNLDGLRAD LSNLKSHSSV CNICPEEWIY FQKKCYYFGE GTKKWIQARN 501 550 ENSP00000327599/1-293 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000014035/1-293 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000017867/1-290 ---------- ---------- ---------- ---------- ---------- bmy_11782T0/1-239 ---------- ---------- ---------- ---------- ---------- BACU002543/1-523 ACSKLHGRLV SIRSQEEQDF LTKHSNKRGS WIGLRDLDIE GEFIWMDSSP 551 600 ENSP00000327599/1-293 ---------- ---------- ---------- ---------- --CEKRHNC ENSTTRP00000014035/1-293 ---------- ---------- ---------- ---------- --CEKRLSC ENSBTAP00000017867/1-290 ---------- ---------- ---------- ---------- --CEKRLSC bmy_11782T0/1-239 ---------- ---------- ---------- ---------- --CEKRLSC BACU002543/1-523 LGYSNWQLGE PNDAGQGENC VMMQGSGQWN DVFCGSYLNS WVCDRLATC